RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 Q8WTZ3 238 aa2.23□□□□□ -2.05
ECHDC1-223ENST00000534442 GINS4Q9BRT9 223 aa2.23□□□□□ -2.05
ECHDC1-223ENST00000534442 SHANK2-AS3Q9BTD1 123 aa2.23□□□□□ -2.05
ECHDC1-223ENST00000534442 ZNF492Q9P255 531 aa2.23□□□□□ -2.05
ECHDC1-223ENST00000534442 AK3Q9UIJ7 227 aa2.23□□□□□ -2.05
ECHDC1-223ENST00000534442 POMPQ9Y244 141 aa2.23□□□□□ -2.05
ECHDC1-223ENST00000534442 MUC21A0A0G2JKD1 596 aa2.22□□□□□ -2.05
ECHDC1-223ENST00000534442 A8MWP4 228 aa2.22□□□□□ -2.05
ECHDC1-223ENST00000534442 ATG12O94817 140 aa2.22□□□□□ -2.05
ECHDC1-223ENST00000534442 GID4Q8IVV7 300 aa2.22□□□□□ -2.05
ECHDC1-223ENST00000534442 OR4X1Q8NH49 305 aa2.22□□□□□ -2.05
ECHDC1-223ENST00000534442 DNAJC30Q96LL9 226 aa2.22□□□□□ -2.05
ECHDC1-223ENST00000534442 ARL2BPQ9Y2Y0 163 aa2.22□□□□□ -2.05
ECHDC1-223ENST00000534442 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 H3BQ85 93 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 K7ERS5 55 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 TCRBP04435 133 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 RNASE2P10153 161 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 CBX5P45973 191 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 YPEL3P61236 119 aaPredicted RBP2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 HIST1H1AQ02539 215 aaPredicted RBP2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 C1orf194Q5T5A4 169 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 LAIR2Q6ISS4 152 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 SPATA24Q86W54 205 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 ZCCHC13Q8WW36 166 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 SH3BGRL3Q9H299 93 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 FKBP11Q9NYL4 201 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 TAS2R8Q9NYW2 309 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 CKLFQ9UBR5 152 aa2.21□□□□□ -2.06
ECHDC1-223ENST00000534442 FABP12A6NFH5 140 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 J3QLW9 94 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 CORTO00230 105 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 EDF1O60869 148 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 SNAPC5O75971 98 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 FAM107AO95990 144 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 OR10J4P0C629 311 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 SFTA3P0C7M3 94 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 AKR1C4P17516 323 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 S100A2P29034 98 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 TCL1AP56279 114 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 MP68P56378 58 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 UBE2G2P60604 165 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 SUPT4H1P63272 117 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 ERHP84090 104 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 FLI1Q01543 452 aaPredicted RBP2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 Q0VG73 95 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 GUK1Q16774 197 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 PDZD11Q5EBL8 140 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 UBE2WQ96B02 151 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 CMSS1Q9BQ75 279 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 TMEM109Q9BVC6 243 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 GABARAPL1Q9H0R8 117 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 GTSF1LQ9H1H1 148 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 MRPL16Q9NX20 251 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 COMMD9Q9P000 198 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 MRPL36Q9P0J6 103 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 PRNDQ9UKY0 176 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 CARHSP1Q9Y2V2 147 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 R4GN34 69 aa2.2□□□□□ -2.06
ECHDC1-223ENST00000534442 IGKV2-24A0A0C4DH68 120 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 DAPL1A0PJW8 107 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 IGLC1P0CG04 106 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 UBBP0CG47 229 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 SNCAP37840 140 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 HSPA13P48723 471 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 COX6A2Q02221 97 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 ELOBQ15370 118 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 OR8I2Q8N0Y5 310 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 HOPXQ9BPY8 73 aaPredicted RBP2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 NAGKQ9UJ70 344 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 TRAPPC1Q9Y5R8 145 aa2.19□□□□□ -2.06
ECHDC1-223ENST00000534442 M0R129 80 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 GNGT2O14610 69 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 MT-ND6P03923 174 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 COX4I1P13073 169 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 HRES1P13985 223 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 PVALBP20472 110 aaPredicted RBP2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 OR10J1P30954 320 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 RPL5P46777 297 aaKnown RBP2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 RAB2AP61019 212 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 C1orf137Q5JT78 98 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 NIT1Q86X76 327 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 DEFB107AQ8IZN7 70 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 C3orf22Q8N5N4 141 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 BPIFB6Q8NFQ5 453 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 DTD1Q8TEA8 209 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 TSC22D3Q99576 134 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 RTBDNQ9BSG5 229 aaPredicted RBP2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 LINC00474Q9P2X8 69 aa2.18□□□□□ -2.06
ECHDC1-223ENST00000534442 TRAV12-3A0A0B4J271 114 aa2.17□□□□□ -2.06
ECHDC1-223ENST00000534442 A0A0B4J2C4 111 aa2.17□□□□□ -2.06
ECHDC1-223ENST00000534442 A0A1B0GVG6 124 aa2.17□□□□□ -2.06
ECHDC1-223ENST00000534442 ATP5HO75947 161 aa2.17□□□□□ -2.06
ECHDC1-223ENST00000534442 NFYAP23511 347 aaPredicted RBP2.17□□□□□ -2.06
ECHDC1-223ENST00000534442 RCVRNP35243 200 aa2.17□□□□□ -2.06
ECHDC1-223ENST00000534442 MT4P47944 62 aa2.17□□□□□ -2.06
ECHDC1-223ENST00000534442 INPP1P49441 399 aa2.17□□□□□ -2.06
ECHDC1-223ENST00000534442 POLR2GP62487 172 aaKnown RBP eCLIP2.17□□□□□ -2.06
ECHDC1-223ENST00000534442 CATR1Q13166 79 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms