RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	NAP1L6	A6NFF2	107 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412		A8MWV9	139 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	CCS	O14618	274 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	OR7C2	O60412	319 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	PVALB	P20472	110 aa	Predicted RBP	3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	BTC	P35070	178 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	CNBP	P62633	177 aa	Known RBP	3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	IL15RA	Q13261	267 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	ENHO	Q6UWT2	76 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	OR10G7	Q8NGN6	311 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	RNF185	Q96GF1	192 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	ZC2HC1A	Q96GY0	325 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	SAMD10	Q9BYL1	202 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	TREM1	Q9NP99	234 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	OTOR	Q9NRC9	128 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412	KCNIP2	Q9NS61	270 aa		3.79	□□□□□ -1.8
PICALM-223	ENST00000534412		H3BMQ9	156 aa		3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	TAAR5	O14804	337 aa		3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	ZNF80	P51504	273 aa	Predicted RBP	3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	KRTAP10-8	P60410	259 aa		3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	GOLT1A	Q6ZVE7	132 aa		3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	C14orf178	Q8N769	122 aa	Predicted RBP	3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	CMTM2	Q8TAZ6	248 aa		3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	SPACA4	Q8TDM5	124 aa		3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	HYLS1	Q96M11	299 aa		3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	MRPS26	Q9BYN8	205 aa	Known RBP	3.78	□□□□□ -1.8
PICALM-223	ENST00000534412	SERTM2	A0A1B0GWG4	89 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	PHOX2A	O14813	284 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	HLA-DQA1	P01909	254 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	CRP	P02741	224 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	MIA	Q16674	131 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	KHDC3L	Q587J8	217 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	FAM74A1	Q5RGS3	127 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	KRTAP26-1	Q6PEX3	210 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	KCNIP4	Q6PIL6	250 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	TMEM75	Q8N9X5	138 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	OR5C1	Q8NGR4	320 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	OR2T35	Q8NGX2	323 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	NMES1	Q9C002	83 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	WDR61	Q9GZS3	305 aa	Known RBP	3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	DPH3P1	Q9H4G8	78 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	PRR34	Q9NV39	138 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	PLAC8	Q9NZF1	115 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	OR5AC2	Q9NZP5	309 aa		3.77	□□□□□ -1.81
PICALM-223	ENST00000534412	TRBV6-8	A0A0A6YYG3	113 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	TRBV10-1	A0A0K0K1A3	114 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	PGP	A6NDG6	321 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	FAM25E	A8MYX2	175 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	GCG	P01275	180 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	TAS2R45	P59539	299 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	S100A10	P60903	97 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	UBE2D3	P61077	147 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	UBE2D2	P62837	147 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	PRR3	P79522	188 aa	Known RBP	3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	CNPY1	Q3B7I2	92 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	MPV17L2	Q567V2	206 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	C15orf54	Q8N8G6	183 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	OR2G3	Q8NGZ4	309 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	C2orf48	Q96LS8	159 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	NDFIP1	Q9BT67	221 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	JPT2	Q9H910	190 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	IL36B	Q9NZH7	164 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	MBD2	Q9UBB5	411 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	KIF25-AS1	Q9Y6Z4	181 aa		3.76	□□□□□ -1.81
PICALM-223	ENST00000534412	C17orf112	F2Z3M2	114 aa		3.75	□□□□□ -1.81
PICALM-223	ENST00000534412	TCRA	P04437	139 aa		3.75	□□□□□ -1.81
PICALM-223	ENST00000534412	CHTF8	P0CG12	524 aa		3.75	□□□□□ -1.81
PICALM-223	ENST00000534412	S100A5	P33763	92 aa		3.75	□□□□□ -1.81
PICALM-223	ENST00000534412	GNG5	P63218	68 aa		3.75	□□□□□ -1.81
PICALM-223	ENST00000534412	TRIQK	Q629K1	86 aa		3.75	□□□□□ -1.81
PICALM-223	ENST00000534412	OR10G8	Q8NGN5	311 aa		3.75	□□□□□ -1.81
PICALM-223	ENST00000534412	C7orf33	Q8WU49	177 aa		3.75	□□□□□ -1.81
PICALM-223	ENST00000534412	TRBV7-3	A0A075B6L6	115 aa		3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	IGHV3-64	A0A075B6Q5	118 aa		3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	CENPX	A8MT69	81 aa		3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	NOL3	O60936	208 aa	Known RBP	3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	ANG	P03950	147 aa	Known RBP	3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	PKIA	P61925	76 aa		3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	LGALSL	Q3ZCW2	172 aa	Predicted RBP	3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	SMUG1	Q53HV7	270 aa		3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	DNLZ	Q5SXM8	178 aa		3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	REG3G	Q6UW15	175 aa		3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	SPINK6	Q6UWN8	80 aa		3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	C5orf17	Q8NAS9	161 aa		3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	SDHC	Q99643	169 aa	Predicted RBP	3.74	□□□□□ -1.81
PICALM-223	ENST00000534412	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	TMEM262	E9PQX1	116 aa		3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	EIF3G	O75821	320 aa	Known RBP eCLIP	3.73	□□□□□ -1.81	2e-13	■□□□□ 10.5
PICALM-223	ENST00000534412	PTTG1	O95997	202 aa		3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	KRTAP5-9	P26371	169 aa		3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	S100A4	P26447	101 aa	Known RBP	3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	FLI1	Q01543	452 aa	Predicted RBP	3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	RIG	Q13278	110 aa		3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	LRRC37A5P	Q49AS3	106 aa		3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	FAM74A4	Q5TZK3	123 aa		3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	COX8C	Q7Z4L0	72 aa		3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	SFRP2	Q96HF1	295 aa		3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	SEC22C	Q9BRL7	303 aa		3.73	□□□□□ -1.81
PICALM-223	ENST00000534412	PSG8	Q9UQ74	426 aa		3.73	□□□□□ -1.81

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