RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 RLN2P04090 185 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 SCGB1A1P11684 91 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 RPL5P46777 297 aaKnown RBP2.86□□□□□ -1.95
CASP4-213ENST00000534356 AKR1D1P51857 326 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 ERHP84090 104 aaKnown RBP2.86□□□□□ -1.95
CASP4-213ENST00000534356 ZNF90Q03938 601 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 MLLT11Q13015 90 aaPredicted RBP2.86□□□□□ -1.95
CASP4-213ENST00000534356 OR2F1Q13607 317 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 MSMO1Q15800 293 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 OGFRL1Q5TC84 451 aaPredicted RBP2.86□□□□□ -1.95
CASP4-213ENST00000534356 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 MRPL52Q86TS9 123 aaKnown RBP2.86□□□□□ -1.95
CASP4-213ENST00000534356 BLNKQ8WV28 456 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 YIPF6Q96EC8 236 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 SMIM12Q96EX1 92 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 DUSP21Q9H596 190 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 NOP10Q9NPE3 64 aaKnown RBP2.86□□□□□ -1.95
CASP4-213ENST00000534356 SPANXA1Q9NS26 97 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 R4GN34 69 aa2.86□□□□□ -1.95
CASP4-213ENST00000534356 LPAP08519 4548 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 IGKV1D-37A0A075B6S9 117 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 TRAV8-2A0A0B4J237 113 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 TRDV1A0A1B0GX56 115 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 GPR31O00270 319 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 PDCD5O14737 125 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 ATP5G1P05496 136 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 TSPOP30536 169 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 OR10J1P30954 320 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 SDC2P34741 201 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 SNCAP37840 140 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 ATP5G3P48201 142 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 SNRPD3P62318 126 aaKnown RBP2.85□□□□□ -1.95
CASP4-213ENST00000534356 WFDC2Q14508 124 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 RNASE10Q5GAN6 216 aaKnown RBP2.85□□□□□ -1.95
CASP4-213ENST00000534356 FOXI2Q6ZQN5 318 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 ZFP82Q8N141 532 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 DYNC2LI1Q8TCX1 351 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 Q8WTZ3 238 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 GNPNAT1Q96EK6 184 aaPredicted RBP2.85□□□□□ -1.95
CASP4-213ENST00000534356 MRAP2Q96G30 205 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 ACY3Q96HD9 319 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 FMC1Q96HJ9 113 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 TP53RKQ96S44 253 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 LINC01587Q99440 93 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 TMEM208Q9BTX3 173 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 MRPS26Q9BYN8 205 aaKnown RBP2.85□□□□□ -1.95
CASP4-213ENST00000534356 TXNL4BQ9NX01 149 aaKnown RBP2.85□□□□□ -1.95
CASP4-213ENST00000534356 RBM12B-AS1Q9P1G2 102 aa2.85□□□□□ -1.95
CASP4-213ENST00000534356 MRPS16Q9Y3D3 137 aaKnown RBP2.85□□□□□ -1.95
CASP4-213ENST00000534356 A0A1B0GXF2 115 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 A8MTW9 85 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 IFNA5P01569 189 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 OR5AC1P0C628 307 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 ASIPP42127 132 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 TAS2R20P59543 309 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 YPEL3P61236 119 aaPredicted RBP2.84□□□□□ -1.95
CASP4-213ENST00000534356 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 SFXN4Q6P4A7 337 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 Q6ZQT7 251 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 SMIM8Q96KF7 97 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 IGF2BP2-AS1Q96M15 143 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 UPK3BQ9BT76 320 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 PBDC1Q9BVG4 233 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 FKBP11Q9NYL4 201 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 PRO0628Q9UI54 55 aa2.84□□□□□ -1.95
CASP4-213ENST00000534356 A0A1B0GV90 55 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 H3BP45 60 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 IGHV3-53P01767 116 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 NBEAP1P0C6P0 100 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 SEC11BP0C7V7 166 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 MT1HL1P0DM35 61 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 PVALBP20472 110 aaPredicted RBP2.83□□□□□ -1.96
CASP4-213ENST00000534356 PSMA1P25786 263 aaKnown RBP2.83□□□□□ -1.96
CASP4-213ENST00000534356 AQP4P55087 323 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 RAB2AP61019 212 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 RPL19P84098 196 aaKnown RBP2.83□□□□□ -1.96
CASP4-213ENST00000534356 BAXQ07812 192 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 EBLN2Q6P2I7 272 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 Q6ZTI0 123 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 WFDC10BQ8IUB3 73 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 OR4C16Q8NGL9 310 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 NDUFB11Q9NX14 153 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 SCN3BQ9NY72 215 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 DOK5Q9P104 306 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 ANAPC10Q9UM13 185 aa2.83□□□□□ -1.96
CASP4-213ENST00000534356 IGKV1OR2-108A0A075B7D4 117 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 ORM1P02763 201 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 METTL15P1P0C7V9 234 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 RPL35P42766 123 aaKnown RBP2.82□□□□□ -1.96
CASP4-213ENST00000534356 PSMB3P49720 205 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 LYPD5Q6UWN5 251 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 LINC00299Q6ZSB3 139 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 FA2HQ7L5A8 372 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 PACRGLQ8N7B6 248 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 OR5H2Q8NGV7 314 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 NIT2Q9NQR4 276 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 HSPB11Q9Y547 144 aa2.82□□□□□ -1.96
CASP4-213ENST00000534356 TRAV30A0A087WSZ9 112 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms