RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 LRRC37A2A6NM11 1700 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 TRAV12-2A0A075B6T6 113 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 FAM92AA1XBS5 289 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 HCRTO43612 131 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 OCIAD2Q56VL3 154 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 UNQ6190/PRO20217Q6UXQ8 127 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 Q6ZUT4 128 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 TPRP12270 2363 aaKnown RBP1.6□□□□□ -2.15
HIPK3-206ENST00000534262 PRRC2BQ5JSZ5 2229 aaKnown RBP1.6□□□□□ -2.15
HIPK3-206ENST00000534262 SDK1Q7Z5N4 2213 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 COL4A6Q14031 1691 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 PLXNA1Q9UIW2 1896 aa1.6□□□□□ -2.15
HIPK3-206ENST00000534262 ZFC3H1O60293 1989 aaKnown RBP1.59□□□□□ -2.15
HIPK3-206ENST00000534262 CR1P17927 2039 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 PHIPQ8WWQ0 1821 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 ZNF236Q9UL36 1845 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 ACACBO00763 2458 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 TRGV2A0A075B6R0 118 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 SPAARA0A1B0GVQ0 90 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 F8W1H4 67 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 CCL25O15444 150 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 EDF1O60869 148 aaKnown RBP1.59□□□□□ -2.15
HIPK3-206ENST00000534262 FGF7P21781 194 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 S100A1P23297 94 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 GUCA1AP43080 201 aaPredicted RBP1.59□□□□□ -2.15
HIPK3-206ENST00000534262 MED12LQ86YW9 2145 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 C5orf17Q8NAS9 161 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.59□□□□□ -2.15
HIPK3-206ENST00000534262 ZNF431Q8TF32 576 aaPredicted RBP1.59□□□□□ -2.15
HIPK3-206ENST00000534262 TMEM203Q969S6 136 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 SMIM7Q9BQ49 75 aa1.59□□□□□ -2.15
HIPK3-206ENST00000534262 COL11A1P12107 1806 aaPredicted RBP1.59□□□□□ -2.16
HIPK3-206ENST00000534262 GBF1Q92538 1859 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 CACNA1HO95180 2353 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 A0A0G2JMZ2 1700 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 ARAP2Q8WZ64 1704 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 SIPA1L3O60292 1781 aaPredicted RBP1.58□□□□□ -2.16
HIPK3-206ENST00000534262 LOC107984156A0A0G2JMH3 177 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 ADCYAP1P18509 176 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 LINC01545Q5VT33 79 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 MIC13Q5XKP0 118 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 SLC25A26Q70HW3 274 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 ARL17AQ8IVW1 177 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 TCTEX1D1Q8N7M0 179 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 KLK9Q9UKQ9 250 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 FOCADQ5VW36 1801 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 TECTAO75443 2155 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 UNC13CQ8NB66 2214 aa1.58□□□□□ -2.16
HIPK3-206ENST00000534262 DOCK1Q14185 1865 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 TRAV2A0A0B4J234 112 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 CCDC179H3BU77 68 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 CORTO00230 105 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 S100PP25815 95 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 CD52P31358 61 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 MPV17LQ2QL34 196 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 GKN2Q86XP6 184 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 SNX29P2Q8IUI4 249 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 DEFB124Q8NES8 71 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 ZNF563Q8TA94 476 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 CDC42SE1Q9NRR8 79 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 C22orf24Q9Y442 160 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 ALPK3Q96L96 1907 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 EPG5Q9HCE0 2579 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 LOC285556D6RIA3 1793 aa1.57□□□□□ -2.16
HIPK3-206ENST00000534262 EP300Q09472 2414 aaPredicted RBP1.56□□□□□ -2.16
HIPK3-206ENST00000534262 FASNP49327 2511 aaKnown RBP1.56□□□□□ -2.16
HIPK3-206ENST00000534262 CXorf51AA0A1B0GTR3 108 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 IGLV3-1P01715 115 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 IGHV3-30P01768 117 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 IGHV3-30-5P0DP03 117 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 ZNF25P17030 456 aaPredicted RBP1.56□□□□□ -2.16
HIPK3-206ENST00000534262 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 WHAMMP3Q1A5X7 153 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 MEIG1Q5JSS6 88 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 FAM74A1Q5RGS3 127 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 CSAG1Q6PB30 78 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 PP6455Q8WZ26 134 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 SCN3BQ9NY72 215 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 TAS2R8Q9NYW2 309 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 NOP16Q9Y3C1 178 aaKnown RBP1.56□□□□□ -2.16
HIPK3-206ENST00000534262 SPTBN4Q9H254 2564 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 FBN1P35555 2871 aaKnown RBP1.56□□□□□ -2.16
HIPK3-206ENST00000534262 SCN3AQ9NY46 2000 aa1.56□□□□□ -2.16
HIPK3-206ENST00000534262 A0A1W2PRS3 328 aa1.55□□□□□ -2.16
HIPK3-206ENST00000534262 LINC00299Q6ZSB3 139 aa1.55□□□□□ -2.16
HIPK3-206ENST00000534262 VSTM2AQ8TAG5 236 aa1.55□□□□□ -2.16
HIPK3-206ENST00000534262 LIMD2Q9BT23 127 aa1.55□□□□□ -2.16
HIPK3-206ENST00000534262 AGPAT4-IT1Q9H0P7 198 aa1.55□□□□□ -2.16
HIPK3-206ENST00000534262 ANKRD11Q6UB99 2663 aaPredicted RBP1.55□□□□□ -2.16
HIPK3-206ENST00000534262 KMT2BQ9UMN6 2715 aaPredicted RBP1.55□□□□□ -2.16
HIPK3-206ENST00000534262 PLIN4Q96Q06 1357 aa1.55□□□□□ -2.16
HIPK3-206ENST00000534262 COL6A3P12111 3177 aa1.55□□□□□ -2.16
HIPK3-206ENST00000534262 GVINP1Q7Z2Y8 2422 aa1.55□□□□□ -2.16
HIPK3-206ENST00000534262 FLNBO75369 2602 aaKnown RBP1.54□□□□□ -2.16
HIPK3-206ENST00000534262 PLXNB2O15031 1838 aa1.54□□□□□ -2.16
HIPK3-206ENST00000534262 SIP14410 1827 aa1.54□□□□□ -2.16
HIPK3-206ENST00000534262 KIAA1549LQ6ZVL6 1849 aa1.54□□□□□ -2.16
HIPK3-206ENST00000534262 SZT2Q5T011 3432 aa1.54□□□□□ -2.16
HIPK3-206ENST00000534262 H3BRM9 83 aa1.54□□□□□ -2.16
HIPK3-206ENST00000534262 J3QLW9 94 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms