RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 EPM2AB3EWF7 344 aa12.64□□□□□ -0.39
LRRK1-210ENST00000534045 F2Z2F3 143 aa12.64□□□□□ -0.39
LRRK1-210ENST00000534045 CACNG7P62955 275 aa12.64□□□□□ -0.39
LRRK1-210ENST00000534045 NEXN-AS1Q8NBZ9 246 aa12.64□□□□□ -0.39
LRRK1-210ENST00000534045 UBE2WQ96B02 151 aa12.64□□□□□ -0.39
LRRK1-210ENST00000534045 DNAH5Q8TE73 4624 aa12.63□□□□□ -0.39
LRRK1-210ENST00000534045 TRBV6-8A0A0A6YYG3 113 aa12.63□□□□□ -0.39
LRRK1-210ENST00000534045 IGLV2-8P01709 118 aa12.63□□□□□ -0.39
LRRK1-210ENST00000534045 MGPP08493 103 aa12.63□□□□□ -0.39
LRRK1-210ENST00000534045 TMEM97Q5BJF2 176 aa12.63□□□□□ -0.39
LRRK1-210ENST00000534045 CHCHD5Q9BSY4 110 aa12.63□□□□□ -0.39
LRRK1-210ENST00000534045 H7C1H1 209 aa12.62□□□□□ -0.39
LRRK1-210ENST00000534045 LECT2O14960 151 aa12.62□□□□□ -0.39
LRRK1-210ENST00000534045 PKIAP61925 76 aa12.62□□□□□ -0.39
LRRK1-210ENST00000534045 BLOC1S1P78537 153 aa12.62□□□□□ -0.39
LRRK1-210ENST00000534045 Q0VG73 95 aa12.62□□□□□ -0.39
LRRK1-210ENST00000534045 C19orf71A6NCJ1 209 aa12.61□□□□□ -0.39
LRRK1-210ENST00000534045 CRPP02741 224 aa12.61□□□□□ -0.39
LRRK1-210ENST00000534045 XGP55808 180 aa12.61□□□□□ -0.39
LRRK1-210ENST00000534045 BAALCQ8WXS3 180 aa12.61□□□□□ -0.39
LRRK1-210ENST00000534045 FRZBQ92765 325 aa12.61□□□□□ -0.39
LRRK1-210ENST00000534045 TRGC1P0CF51 173 aa12.6□□□□□ -0.39
LRRK1-210ENST00000534045 IGLC6P0CF74 106 aa12.6□□□□□ -0.39
LRRK1-210ENST00000534045 C9orf62Q8N4C0 152 aa12.6□□□□□ -0.39
LRRK1-210ENST00000534045 ALKAL2Q6UX46 152 aa12.59□□□□□ -0.39
LRRK1-210ENST00000534045 Q8N976 141 aa12.59□□□□□ -0.39
LRRK1-210ENST00000534045 DNAJC30Q96LL9 226 aa12.59□□□□□ -0.39
LRRK1-210ENST00000534045 KIF25-AS1Q9Y6Z4 181 aa12.59□□□□□ -0.39
LRRK1-210ENST00000534045 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.58□□□□□ -0.4
LRRK1-210ENST00000534045 ANGP03950 147 aaKnown RBP12.58□□□□□ -0.4
LRRK1-210ENST00000534045 APOBP04114 4563 aaKnown RBP12.58□□□□□ -0.4
LRRK1-210ENST00000534045 LYZL1Q6UWQ5 148 aa12.58□□□□□ -0.4
LRRK1-210ENST00000534045 C15orf54Q8N8G6 183 aa12.58□□□□□ -0.4
LRRK1-210ENST00000534045 NUDT10Q8NFP7 164 aa12.58□□□□□ -0.4
LRRK1-210ENST00000534045 NUDT11Q96G61 164 aa12.58□□□□□ -0.4
LRRK1-210ENST00000534045 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
LRRK1-210ENST00000534045 C1orf43Q9BWL3 253 aa12.58□□□□□ -0.4
LRRK1-210ENST00000534045 TRBV20OR9-2A0A075B6H5 130 aa12.57□□□□□ -0.4
LRRK1-210ENST00000534045 TRBV25-1A0A075B6N4 114 aa12.57□□□□□ -0.4
LRRK1-210ENST00000534045 NTF3P20783 257 aa12.57□□□□□ -0.4
LRRK1-210ENST00000534045 SMR3BP02814 79 aaPredicted RBP12.56□□□□□ -0.4
LRRK1-210ENST00000534045 TWIST1Q15672 202 aa12.56□□□□□ -0.4
LRRK1-210ENST00000534045 FAM229AH3BQW9 127 aa12.55□□□□□ -0.4
LRRK1-210ENST00000534045 M0QY20 66 aa12.55□□□□□ -0.4
LRRK1-210ENST00000534045 CEBPGP53567 150 aa12.55□□□□□ -0.4
LRRK1-210ENST00000534045 WFDC2Q14508 124 aa12.55□□□□□ -0.4
LRRK1-210ENST00000534045 SUMO4Q6EEV6 95 aa12.55□□□□□ -0.4
LRRK1-210ENST00000534045 SMIM15Q7Z3B0 74 aa12.55□□□□□ -0.4
LRRK1-210ENST00000534045 OCC1Q8TAD7 63 aa12.55□□□□□ -0.4
LRRK1-210ENST00000534045 DPH3P1Q9H4G8 78 aa12.55□□□□□ -0.4
LRRK1-210ENST00000534045 RPP21Q9H633 154 aaKnown RBP12.55□□□□□ -0.4
LRRK1-210ENST00000534045 GAGE6Q13070 117 aa12.54□□□□□ -0.4
LRRK1-210ENST00000534045 MPV17L2Q567V2 206 aa12.54□□□□□ -0.4
LRRK1-210ENST00000534045 WDR73Q6P4I2 378 aa12.54□□□□□ -0.4
LRRK1-210ENST00000534045 RASL11AQ6T310 242 aa12.54□□□□□ -0.4
LRRK1-210ENST00000534045 RNASE7Q9H1E1 156 aaKnown RBP12.54□□□□□ -0.4
LRRK1-210ENST00000534045 IGHV1-24A0A0C4DH33 117 aa12.53□□□□□ -0.4
LRRK1-210ENST00000534045 TMEM250H0YL14 139 aa12.53□□□□□ -0.4
LRRK1-210ENST00000534045 NKX2-5P52952 324 aaPredicted RBP12.53□□□□□ -0.4
LRRK1-210ENST00000534045 Q5VSD8 79 aa12.53□□□□□ -0.4
LRRK1-210ENST00000534045 ATRAIDQ6UW56 229 aa12.53□□□□□ -0.4
LRRK1-210ENST00000534045 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
LRRK1-210ENST00000534045 EIF5A2Q9GZV4 153 aaKnown RBP12.53□□□□□ -0.4
LRRK1-210ENST00000534045 ABCA13Q86UQ4 5058 aa12.53□□□□□ -0.4
LRRK1-210ENST00000534045 HAMPP81172 84 aa12.52□□□□□ -0.41
LRRK1-210ENST00000534045 C14orf177Q52M58 125 aa12.52□□□□□ -0.41
LRRK1-210ENST00000534045 NIT2Q9NQR4 276 aa12.52□□□□□ -0.41
LRRK1-210ENST00000534045 GATCO43716 136 aaKnown RBP12.51□□□□□ -0.41
LRRK1-210ENST00000534045 INAFM2P0DMQ5 153 aa12.51□□□□□ -0.41
LRRK1-210ENST00000534045 MIAQ16674 131 aa12.51□□□□□ -0.41
LRRK1-210ENST00000534045 ENHOQ6UWT2 76 aa12.51□□□□□ -0.41
LRRK1-210ENST00000534045 K7EN84 100 aa12.5□□□□□ -0.41
LRRK1-210ENST00000534045 CTRLP40313 264 aa12.5□□□□□ -0.41
LRRK1-210ENST00000534045 RBX1P62877 108 aa12.5□□□□□ -0.41
LRRK1-210ENST00000534045 IQCJQ1A5X6 159 aa12.5□□□□□ -0.41
LRRK1-210ENST00000534045 LINC00269Q8N2A0 174 aa12.49□□□□□ -0.41
LRRK1-210ENST00000534045 BORCS7Q96B45 105 aa12.49□□□□□ -0.41
LRRK1-210ENST00000534045 A8MWL6 223 aa12.48□□□□□ -0.41
LRRK1-210ENST00000534045 UBE2L6O14933 153 aa12.48□□□□□ -0.41
LRRK1-210ENST00000534045 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
LRRK1-210ENST00000534045 TMEM243Q9BU79 118 aa12.48□□□□□ -0.41
LRRK1-210ENST00000534045 FAM30AQ9NZY2 134 aa12.48□□□□□ -0.41
LRRK1-210ENST00000534045 COTL1Q14019 142 aa12.47□□□□□ -0.41
LRRK1-210ENST00000534045 CLPSL2Q6UWE3 100 aa12.47□□□□□ -0.41
LRRK1-210ENST00000534045 LYPD6BQ8NI32 183 aa12.47□□□□□ -0.41
LRRK1-210ENST00000534045 SMIM7Q9BQ49 75 aa12.46□□□□□ -0.41
LRRK1-210ENST00000534045 CNFNQ9BYD5 112 aa12.46□□□□□ -0.41
LRRK1-210ENST00000534045 LINC01620Q4KN68 170 aa12.45□□□□□ -0.42
LRRK1-210ENST00000534045 TEX261Q6UWH6 196 aa12.45□□□□□ -0.42
LRRK1-210ENST00000534045 FAM231DQ6ZW35 169 aa12.45□□□□□ -0.42
LRRK1-210ENST00000534045 DEFB104AQ8WTQ1 72 aa12.45□□□□□ -0.42
LRRK1-210ENST00000534045 PGLYRP4Q96LB8 373 aa12.45□□□□□ -0.42
LRRK1-210ENST00000534045 ZNF727A8MUV8 499 aa12.44□□□□□ -0.42
LRRK1-210ENST00000534045 AMTP48728 403 aa12.44□□□□□ -0.42
LRRK1-210ENST00000534045 GTSF1Q8WW33 167 aa12.44□□□□□ -0.42
LRRK1-210ENST00000534045 PRR34Q9NV39 138 aa12.44□□□□□ -0.42
LRRK1-210ENST00000534045 REG3AQ06141 175 aa12.43□□□□□ -0.42
LRRK1-210ENST00000534045 FAM210AQ96ND0 272 aa12.43□□□□□ -0.42
LRRK1-210ENST00000534045 TRAV26-2A0A0B4J265 109 aa12.42□□□□□ -0.42
LRRK1-210ENST00000534045 A0A1B0GUV1 79 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms