RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 DNAH2Q9P225 4427 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 A0A1B0GVY2 172 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 C7orf77A4D0Y5 90 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 PRSS29PA6NIE9 313 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 H7C1H1 209 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 RPL36AP83881 106 aaKnown RBP8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 RHEBQ15382 184 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 KCNIP4Q6PIL6 250 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 SVBPQ8N300 66 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 RPL36ALQ969Q0 106 aaKnown RBP8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 Q9H8V8 135 aa8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 MRPS16Q9Y3D3 137 aaKnown RBP8.92□□□□□ -0.98
TRAPPC4-212ENST00000533058 A0A1B0GW15 77 aa8.91□□□□□ -0.98
TRAPPC4-212ENST00000533058 SNAPINO95295 136 aa8.91□□□□□ -0.98
TRAPPC4-212ENST00000533058 S100A8P05109 93 aa8.91□□□□□ -0.98
TRAPPC4-212ENST00000533058 BTF3P20290 206 aaKnown RBP8.91□□□□□ -0.98
TRAPPC4-212ENST00000533058 S100PP25815 95 aa8.91□□□□□ -0.98
TRAPPC4-212ENST00000533058 LINC00315P59091 139 aa8.91□□□□□ -0.98
TRAPPC4-212ENST00000533058 HBBP68871 147 aa8.91□□□□□ -0.98
TRAPPC4-212ENST00000533058 ATP6V0E2Q8NHE4 81 aa8.91□□□□□ -0.98
TRAPPC4-212ENST00000533058 TRBV10-1A0A0K0K1A3 114 aa8.9□□□□□ -0.98
TRAPPC4-212ENST00000533058 TTC32Q5I0X7 151 aa8.9□□□□□ -0.98
TRAPPC4-212ENST00000533058 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC4-212ENST00000533058 TMEM191AQ9H0A3 160 aa8.9□□□□□ -0.98
TRAPPC4-212ENST00000533058 Q9UF83 564 aa8.9□□□□□ -0.98
TRAPPC4-212ENST00000533058 TNFRSF18Q9Y5U5 241 aa8.9□□□□□ -0.98
TRAPPC4-212ENST00000533058 FAT2Q9NYQ8 4349 aa8.9□□□□□ -0.98
TRAPPC4-212ENST00000533058 A0A087WWC5 75 aa8.89□□□□□ -0.99
TRAPPC4-212ENST00000533058 TRAV26-2A0A0B4J265 109 aa8.89□□□□□ -0.99
TRAPPC4-212ENST00000533058 RASL11AQ6T310 242 aa8.89□□□□□ -0.99
TRAPPC4-212ENST00000533058 LYPD5Q6UWN5 251 aa8.89□□□□□ -0.99
TRAPPC4-212ENST00000533058 C6orf223Q8N319 242 aa8.89□□□□□ -0.99
TRAPPC4-212ENST00000533058 NEXN-AS1Q8NBZ9 246 aa8.89□□□□□ -0.99
TRAPPC4-212ENST00000533058 BTF3L4Q96K17 158 aa8.89□□□□□ -0.99
TRAPPC4-212ENST00000533058 TMA7Q9Y2S6 64 aaKnown RBP8.89□□□□□ -0.99
TRAPPC4-212ENST00000533058 URGCP-MRPS24S4R325 110 aa8.89□□□□□ -0.99
TRAPPC4-212ENST00000533058 TRBV7-3A0A075B6L6 115 aa8.88□□□□□ -0.99
TRAPPC4-212ENST00000533058 A6NJY4 79 aa8.88□□□□□ -0.99
TRAPPC4-212ENST00000533058 M0QY20 66 aa8.88□□□□□ -0.99
TRAPPC4-212ENST00000533058 ATP5L2Q7Z4Y8 100 aa8.88□□□□□ -0.99
TRAPPC4-212ENST00000533058 AMN1Q8IY45 258 aa8.88□□□□□ -0.99
TRAPPC4-212ENST00000533058 IMMP2LQ96T52 175 aa8.88□□□□□ -0.99
TRAPPC4-212ENST00000533058 GATD1Q8NB37 220 aa8.87□□□□□ -0.99
TRAPPC4-212ENST00000533058 GTSF1LQ9H1H1 148 aa8.87□□□□□ -0.99
TRAPPC4-212ENST00000533058 IGHV3-38A0A0C4DH36 116 aa8.86□□□□□ -0.99
TRAPPC4-212ENST00000533058 A0A1B0GXF2 115 aa8.86□□□□□ -0.99
TRAPPC4-212ENST00000533058 RAB4AP20338 218 aa8.86□□□□□ -0.99
TRAPPC4-212ENST00000533058 UBE2D3P61077 147 aa8.86□□□□□ -0.99
TRAPPC4-212ENST00000533058 UBE2D2P62837 147 aa8.86□□□□□ -0.99
TRAPPC4-212ENST00000533058 MRAP2Q96G30 205 aa8.86□□□□□ -0.99
TRAPPC4-212ENST00000533058 DNAJC30Q96LL9 226 aa8.86□□□□□ -0.99
TRAPPC4-212ENST00000533058 NIT2Q9NQR4 276 aa8.86□□□□□ -0.99
TRAPPC4-212ENST00000533058 TMEM242Q9NWH2 141 aa8.86□□□□□ -0.99
TRAPPC4-212ENST00000533058 TRAV8-6A0A0B4J262 113 aa8.85□□□□□ -0.99
TRAPPC4-212ENST00000533058 NCR2O95944 276 aa8.85□□□□□ -0.99
TRAPPC4-212ENST00000533058 LINC00694P0DN24 101 aa8.85□□□□□ -0.99
TRAPPC4-212ENST00000533058 OR10J3Q5JRS4 329 aa8.85□□□□□ -0.99
TRAPPC4-212ENST00000533058 FAM104BQ5XKR9 115 aa8.85□□□□□ -0.99
TRAPPC4-212ENST00000533058 RPL39LQ96EH5 51 aaKnown RBP8.85□□□□□ -0.99
TRAPPC4-212ENST00000533058 RNF185Q96GF1 192 aa8.85□□□□□ -0.99
TRAPPC4-212ENST00000533058 KRTAP1-5Q9BYS1 174 aa8.85□□□□□ -0.99
TRAPPC4-212ENST00000533058 TRAV9-1A0A075B6T8 112 aa8.84□□□□□ -0.99
TRAPPC4-212ENST00000533058 SMKR1H3BMG3 65 aa8.84□□□□□ -0.99
TRAPPC4-212ENST00000533058 K7EP13 123 aa8.84□□□□□ -0.99
TRAPPC4-212ENST00000533058 SIVA1O15304 175 aa8.84□□□□□ -0.99
TRAPPC4-212ENST00000533058 CKS2P33552 79 aa8.84□□□□□ -0.99
TRAPPC4-212ENST00000533058 TIRAPP58753 221 aa8.84□□□□□ -0.99
TRAPPC4-212ENST00000533058 MRPL51Q4U2R6 128 aaKnown RBP8.83□□□□□ -1
TRAPPC4-212ENST00000533058 LELP1Q5T871 98 aa8.83□□□□□ -1
TRAPPC4-212ENST00000533058 DAZ4Q86SG3 579 aaKnown RBP8.83□□□□□ -1
TRAPPC4-212ENST00000533058 FRZBQ92765 325 aa8.83□□□□□ -1
TRAPPC4-212ENST00000533058 DAZ3Q9NR90 486 aaKnown RBP8.83□□□□□ -1
TRAPPC4-212ENST00000533058 TNP2Q05952 138 aa8.82□□□□□ -1
TRAPPC4-212ENST00000533058 ATRAIDQ6UW56 229 aa8.82□□□□□ -1
TRAPPC4-212ENST00000533058 DEFB104AQ8WTQ1 72 aa8.82□□□□□ -1
TRAPPC4-212ENST00000533058 ST20Q9HBF5 79 aa8.82□□□□□ -1
TRAPPC4-212ENST00000533058 HERC2O95714 4834 aa8.82□□□□□ -1
TRAPPC4-212ENST00000533058 D6R8Y8 96 aa8.81□□□□□ -1
TRAPPC4-212ENST00000533058 GAS8-AS1O95177 125 aa8.81□□□□□ -1
TRAPPC4-212ENST00000533058 PPP1R17O96001 155 aa8.81□□□□□ -1
TRAPPC4-212ENST00000533058 TMEM97Q5BJF2 176 aa8.81□□□□□ -1
TRAPPC4-212ENST00000533058 WFDC10BQ8IUB3 73 aa8.81□□□□□ -1
TRAPPC4-212ENST00000533058 PKD1P98161 4303 aa8.81□□□□□ -1
TRAPPC4-212ENST00000533058 DNAH11Q96DT5 4516 aa8.8□□□□□ -1
TRAPPC4-212ENST00000533058 TGIF2-C20orf24A0A0A6YYL0 155 aa8.8□□□□□ -1
TRAPPC4-212ENST00000533058 SDHAF1A6NFY7 115 aa8.8□□□□□ -1
TRAPPC4-212ENST00000533058 PMCHP20382 165 aa8.8□□□□□ -1
TRAPPC4-212ENST00000533058 RPS10P46783 165 aaKnown RBP8.8□□□□□ -1
TRAPPC4-212ENST00000533058 COTL1Q14019 142 aa8.8□□□□□ -1
TRAPPC4-212ENST00000533058 TMEM136Q6ZRR5 245 aa8.8□□□□□ -1
TRAPPC4-212ENST00000533058 KIAA1109Q2LD37 5005 aa8.8□□□□□ -1
TRAPPC4-212ENST00000533058 PKHD1P08F94 4074 aa8.8□□□□□ -1
TRAPPC4-212ENST00000533058 TRAV9-2A0A087WT02 112 aa8.79□□□□□ -1
TRAPPC4-212ENST00000533058 TRBV6-8A0A0A6YYG3 113 aa8.79□□□□□ -1
TRAPPC4-212ENST00000533058 PPBPP02775 128 aa8.79□□□□□ -1
TRAPPC4-212ENST00000533058 DNAH10OSP0CZ25 163 aa8.79□□□□□ -1
TRAPPC4-212ENST00000533058 COX19Q49B96 90 aa8.79□□□□□ -1
TRAPPC4-212ENST00000533058 ORMDL3Q8N138 153 aa8.79□□□□□ -1
TRAPPC4-212ENST00000533058 PRELID3AQ96N28 172 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms