RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 SIVA1O15304 175 aa16.95■□□□□ 0.3
USP48-214ENST00000532737 MT-ND4LP03901 98 aa16.95■□□□□ 0.3
USP48-214ENST00000532737 RIGQ13278 110 aa16.95■□□□□ 0.3
USP48-214ENST00000532737 DNAH10Q8IVF4 4471 aa16.94■□□□□ 0.3
USP48-214ENST00000532737 LELP1Q5T871 98 aa16.94■□□□□ 0.3
USP48-214ENST00000532737 KRTAP17-1Q9BYP8 105 aa16.94■□□□□ 0.3
USP48-214ENST00000532737 H7C1H1 209 aa16.93■□□□□ 0.3
USP48-214ENST00000532737 RASL11AQ6T310 242 aa16.93■□□□□ 0.3
USP48-214ENST00000532737 ANAPC16Q96DE5 110 aa16.93■□□□□ 0.3
USP48-214ENST00000532737 TRAV26-2A0A0B4J265 109 aa16.92■□□□□ 0.3
USP48-214ENST00000532737 GATD1Q8NB37 220 aa16.92■□□□□ 0.3
USP48-214ENST00000532737 KRTAP1-5Q9BYS1 174 aa16.92■□□□□ 0.3
USP48-214ENST00000532737 TMEM191AQ9H0A3 160 aa16.92■□□□□ 0.3
USP48-214ENST00000532737 OR10J3Q5JRS4 329 aa16.91■□□□□ 0.3
USP48-214ENST00000532737 C10orf91Q5T1B1 145 aa16.91■□□□□ 0.3
USP48-214ENST00000532737 DNAJC30Q96LL9 226 aa16.91■□□□□ 0.3
USP48-214ENST00000532737 TRAV8-6A0A0B4J262 113 aa16.9■□□□□ 0.3
USP48-214ENST00000532737 IGHV3-38A0A0C4DH36 116 aa16.9■□□□□ 0.3
USP48-214ENST00000532737 TNFRSF18Q9Y5U5 241 aa16.9■□□□□ 0.3
USP48-214ENST00000532737 RNF185Q96GF1 192 aa16.89■□□□□ 0.29
USP48-214ENST00000532737 NIT2Q9NQR4 276 aa16.89■□□□□ 0.29
USP48-214ENST00000532737 A0A087WWC5 75 aa16.88■□□□□ 0.29
USP48-214ENST00000532737 DNAH10OSP0CZ25 163 aa16.88■□□□□ 0.29
USP48-214ENST00000532737 CAMPP49913 170 aa16.88■□□□□ 0.29
USP48-214ENST00000532737 TTC32Q5I0X7 151 aa16.88■□□□□ 0.29
USP48-214ENST00000532737 CARHSP1Q9Y2V2 147 aaKnown RBP16.88■□□□□ 0.29
USP48-214ENST00000532737 RAB4AP20338 218 aa16.87■□□□□ 0.29
USP48-214ENST00000532737 MRPL54Q6P161 138 aaKnown RBP16.87■□□□□ 0.29
USP48-214ENST00000532737 AMN1Q8IY45 258 aa16.87■□□□□ 0.29
USP48-214ENST00000532737 DNAH2Q9P225 4427 aa16.87■□□□□ 0.29
USP48-214ENST00000532737 A0A1B0GXF2 115 aa16.86■□□□□ 0.29
USP48-214ENST00000532737 DAZ4Q86SG3 579 aaKnown RBP16.86■□□□□ 0.29
USP48-214ENST00000532737 RPL39LQ96EH5 51 aaKnown RBP16.86■□□□□ 0.29
USP48-214ENST00000532737 DAZ3Q9NR90 486 aaKnown RBP16.86■□□□□ 0.29
USP48-214ENST00000532737 A0A1B0GW15 77 aa16.85■□□□□ 0.29
USP48-214ENST00000532737 GAS8-AS1O95177 125 aa16.85■□□□□ 0.29
USP48-214ENST00000532737 FRZBQ92765 325 aa16.84■□□□□ 0.29
USP48-214ENST00000532737 HERC2O95714 4834 aa16.84■□□□□ 0.29
USP48-214ENST00000532737 TRBV6-8A0A0A6YYG3 113 aa16.83■□□□□ 0.28
USP48-214ENST00000532737 RTL8CO15255 209 aa16.83■□□□□ 0.28
USP48-214ENST00000532737 HBBP68871 147 aa16.83■□□□□ 0.28
USP48-214ENST00000532737 LINC01556Q5JQF7 62 aa16.83■□□□□ 0.28
USP48-214ENST00000532737 C1orf134Q5TEV5 83 aa16.83■□□□□ 0.28
USP48-214ENST00000532737 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.83■□□□□ 0.28
USP48-214ENST00000532737 CTDSP1Q9GZU7 261 aa16.83■□□□□ 0.28
USP48-214ENST00000532737 HECTD4Q9Y4D8 3996 aa16.83■□□□□ 0.28
USP48-214ENST00000532737 FAM104BQ5XKR9 115 aa16.82■□□□□ 0.28
USP48-214ENST00000532737 NTM-AS1Q6ZSK4 140 aa16.82■□□□□ 0.28
USP48-214ENST00000532737 TRAV9-2A0A087WT02 112 aa16.81■□□□□ 0.28
USP48-214ENST00000532737 ATP5L2Q7Z4Y8 100 aa16.81■□□□□ 0.28
USP48-214ENST00000532737 C6orf223Q8N319 242 aa16.81■□□□□ 0.28
USP48-214ENST00000532737 Q8N3U1 123 aa16.81■□□□□ 0.28
USP48-214ENST00000532737 MRAP2Q96G30 205 aa16.81■□□□□ 0.28
USP48-214ENST00000532737 C7orf77A4D0Y5 90 aa16.8■□□□□ 0.28
USP48-214ENST00000532737 IGHV3-30P01768 117 aa16.8■□□□□ 0.28
USP48-214ENST00000532737 IGHV3-33P01772 117 aa16.8■□□□□ 0.28
USP48-214ENST00000532737 S100A8P05109 93 aa16.8■□□□□ 0.28
USP48-214ENST00000532737 IGHV3-30-3P0DP02 117 aa16.8■□□□□ 0.28
USP48-214ENST00000532737 IGHV3-30-5P0DP03 117 aa16.8■□□□□ 0.28
USP48-214ENST00000532737 CLRN3Q8NCR9 226 aa16.8■□□□□ 0.28
USP48-214ENST00000532737 SMKR1H3BMG3 65 aa16.79■□□□□ 0.28
USP48-214ENST00000532737 TMEM97Q5BJF2 176 aa16.79■□□□□ 0.28
USP48-214ENST00000532737 DEFB104AQ8WTQ1 72 aa16.79■□□□□ 0.28
USP48-214ENST00000532737 IMMP2LQ96T52 175 aa16.79■□□□□ 0.28
USP48-214ENST00000532737 K7EP13 123 aa16.78■□□□□ 0.28
USP48-214ENST00000532737 NCR2O95944 276 aa16.78■□□□□ 0.28
USP48-214ENST00000532737 RPS10P46783 165 aaKnown RBP16.78■□□□□ 0.28
USP48-214ENST00000532737 MRPL51Q4U2R6 128 aaKnown RBP16.78■□□□□ 0.28
USP48-214ENST00000532737 NIT1Q86X76 327 aa16.78■□□□□ 0.28
USP48-214ENST00000532737 TRBV6-5A0A0K0K1A5 114 aa16.77■□□□□ 0.28
USP48-214ENST00000532737 BTF3L4Q96K17 158 aa16.77■□□□□ 0.28
USP48-214ENST00000532737 DNAH17Q9UFH2 4485 aa16.76■□□□□ 0.27
USP48-214ENST00000532737 APOC3P02656 99 aa16.76■□□□□ 0.27
USP48-214ENST00000532737 SDHAF1A6NFY7 115 aa16.75■□□□□ 0.27
USP48-214ENST00000532737 BTF3P20290 206 aaKnown RBP16.75■□□□□ 0.27
USP48-214ENST00000532737 RHEBQ15382 184 aa16.75■□□□□ 0.27
USP48-214ENST00000532737 KCNIP4Q6PIL6 250 aa16.75■□□□□ 0.27
USP48-214ENST00000532737 SLC7A5P1Q8MH63 180 aa16.75■□□□□ 0.27
USP48-214ENST00000532737 C10orf126Q8N4M7 172 aa16.75■□□□□ 0.27
USP48-214ENST00000532737 IQCJQ1A5X6 159 aa16.74■□□□□ 0.27
USP48-214ENST00000532737 NRACQ8N912 160 aa16.74■□□□□ 0.27
USP48-214ENST00000532737 CHCHD5Q9BSY4 110 aa16.74■□□□□ 0.27
USP48-214ENST00000532737 ST20Q9HBF5 79 aa16.74■□□□□ 0.27
USP48-214ENST00000532737 RPS10P5Q9NQ39 176 aa16.74■□□□□ 0.27
USP48-214ENST00000532737 TMEM242Q9NWH2 141 aa16.74■□□□□ 0.27
USP48-214ENST00000532737 TRBV25-1A0A075B6N4 114 aa16.73■□□□□ 0.27
USP48-214ENST00000532737 IGHV1-24A0A0C4DH33 117 aa16.73■□□□□ 0.27
USP48-214ENST00000532737 LINC00336Q6ZUF6 198 aa16.73■□□□□ 0.27
USP48-214ENST00000532737 IBA57-AS1B1ANH7 110 aa16.72■□□□□ 0.27
USP48-214ENST00000532737 TMEM262E9PQX1 116 aa16.72■□□□□ 0.27
USP48-214ENST00000532737 CKS2P33552 79 aa16.72■□□□□ 0.27
USP48-214ENST00000532737 COTL1Q14019 142 aa16.72■□□□□ 0.27
USP48-214ENST00000532737 NDUFA5Q16718 116 aa16.72■□□□□ 0.27
USP48-214ENST00000532737 TMEM70Q9BUB7 260 aa16.72■□□□□ 0.27
USP48-214ENST00000532737 POLR2KP53803 58 aaKnown RBP16.71■□□□□ 0.27
USP48-214ENST00000532737 URGCP-MRPS24S4R325 110 aa16.71■□□□□ 0.27
USP48-214ENST00000532737 FAT2Q9NYQ8 4349 aa16.71■□□□□ 0.26
USP48-214ENST00000532737 A0A087WX48 190 aa16.7■□□□□ 0.26
USP48-214ENST00000532737 PRSS29PA6NIE9 313 aa16.7■□□□□ 0.26
USP48-214ENST00000532737 GAGE6Q13070 117 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms