RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 GNG4P50150 75 aa10.41□□□□□ -0.74
LDLRAD3-205ENST00000532490 HAMPP81172 84 aa10.41□□□□□ -0.74
LDLRAD3-205ENST00000532490 VAX2Q9UIW0 290 aa10.41□□□□□ -0.74
LDLRAD3-205ENST00000532490 F5H697 171 aa10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 RPS20P60866 119 aaKnown RBP10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 ELOBQ15370 118 aa10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 NTM-AS1Q6ZSK4 140 aa10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 FER1L6-AS1Q8NA97 138 aa10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 OR2D3Q8NGH3 330 aa10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 UBE2WQ96B02 151 aa10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 RMI2Q96E14 147 aa10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 DAZAP1Q96EP5 407 aaKnown RBP10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 AP1S3Q96PC3 154 aa10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 MED9Q9NWA0 146 aa10.4□□□□□ -0.74
LDLRAD3-205ENST00000532490 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
LDLRAD3-205ENST00000532490 IFNA1P01562 189 aa10.39□□□□□ -0.75
LDLRAD3-205ENST00000532490 ENHOQ6UWT2 76 aa10.39□□□□□ -0.75
LDLRAD3-205ENST00000532490 FRZBQ92765 325 aa10.39□□□□□ -0.75
LDLRAD3-205ENST00000532490 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
LDLRAD3-205ENST00000532490 M0QY20 66 aa10.38□□□□□ -0.75
LDLRAD3-205ENST00000532490 SMIM17P0DL12 118 aa10.38□□□□□ -0.75
LDLRAD3-205ENST00000532490 MPV17L2Q567V2 206 aa10.38□□□□□ -0.75
LDLRAD3-205ENST00000532490 Q6ZSA8 131 aa10.38□□□□□ -0.75
LDLRAD3-205ENST00000532490 C9orf62Q8N4C0 152 aa10.38□□□□□ -0.75
LDLRAD3-205ENST00000532490 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
LDLRAD3-205ENST00000532490 P01737 135 aa10.37□□□□□ -0.75
LDLRAD3-205ENST00000532490 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
LDLRAD3-205ENST00000532490 CACNG7P62955 275 aa10.37□□□□□ -0.75
LDLRAD3-205ENST00000532490 Q0VG73 95 aa10.37□□□□□ -0.75
LDLRAD3-205ENST00000532490 KCNIP4Q6PIL6 250 aa10.37□□□□□ -0.75
LDLRAD3-205ENST00000532490 Q8N976 141 aa10.37□□□□□ -0.75
LDLRAD3-205ENST00000532490 TPPP3Q9BW30 176 aa10.37□□□□□ -0.75
LDLRAD3-205ENST00000532490 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
LDLRAD3-205ENST00000532490 F2Z2F3 143 aa10.36□□□□□ -0.75
LDLRAD3-205ENST00000532490 TAGLN2P37802 199 aaKnown RBP10.36□□□□□ -0.75
LDLRAD3-205ENST00000532490 TMEM97Q5BJF2 176 aa10.36□□□□□ -0.75
LDLRAD3-205ENST00000532490 LYZL1Q6UWQ5 148 aa10.36□□□□□ -0.75
LDLRAD3-205ENST00000532490 NUDT10Q8NFP7 164 aa10.36□□□□□ -0.75
LDLRAD3-205ENST00000532490 NUDT11Q96G61 164 aa10.36□□□□□ -0.75
LDLRAD3-205ENST00000532490 BIN3Q9NQY0 253 aa10.36□□□□□ -0.75
LDLRAD3-205ENST00000532490 XKRY2A2RUG3 117 aa10.35□□□□□ -0.75
LDLRAD3-205ENST00000532490 SUMO4Q6EEV6 95 aa10.35□□□□□ -0.75
LDLRAD3-205ENST00000532490 C15orf54Q8N8G6 183 aa10.35□□□□□ -0.75
LDLRAD3-205ENST00000532490 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.35□□□□□ -0.75
LDLRAD3-205ENST00000532490 CHCHD5Q9BSY4 110 aa10.35□□□□□ -0.75
LDLRAD3-205ENST00000532490 K7EN84 100 aa10.34□□□□□ -0.75
LDLRAD3-205ENST00000532490 MGPP08493 103 aa10.34□□□□□ -0.75
LDLRAD3-205ENST00000532490 NTF3P20783 257 aa10.34□□□□□ -0.75
LDLRAD3-205ENST00000532490 PKIAP61925 76 aa10.34□□□□□ -0.75
LDLRAD3-205ENST00000532490 IQCJQ1A5X6 159 aa10.34□□□□□ -0.75
LDLRAD3-205ENST00000532490 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
LDLRAD3-205ENST00000532490 AKAP14Q86UN6 197 aa10.34□□□□□ -0.75
LDLRAD3-205ENST00000532490 OCC1Q8TAD7 63 aa10.34□□□□□ -0.75
LDLRAD3-205ENST00000532490 MYCBP2O75592 4640 aa10.34□□□□□ -0.75
LDLRAD3-205ENST00000532490 FAM229AH3BQW9 127 aa10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 H7C1H1 209 aa10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 CTRLP40313 264 aa10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 LINC01620Q4KN68 170 aa10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 LYPD6BQ8NI32 183 aa10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 CNFNQ9BYD5 112 aa10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 PRR34Q9NV39 138 aa10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 HERC1Q15751 4861 aa10.33□□□□□ -0.76
LDLRAD3-205ENST00000532490 TRBV25-1A0A075B6N4 114 aa10.32□□□□□ -0.76
LDLRAD3-205ENST00000532490 TRGC1P0CF51 173 aa10.32□□□□□ -0.76
LDLRAD3-205ENST00000532490 RBX1P62877 108 aa10.32□□□□□ -0.76
LDLRAD3-205ENST00000532490 KRTAP26-1Q6PEX3 210 aa10.32□□□□□ -0.76
LDLRAD3-205ENST00000532490 RNASE7Q9H1E1 156 aaKnown RBP10.32□□□□□ -0.76
LDLRAD3-205ENST00000532490 DPH3P1Q9H4G8 78 aa10.32□□□□□ -0.76
LDLRAD3-205ENST00000532490 hCG_2014768A0A024R1R8 64 aa10.31□□□□□ -0.76
LDLRAD3-205ENST00000532490 CRPP02741 224 aa10.31□□□□□ -0.76
LDLRAD3-205ENST00000532490 NKX2-5P52952 324 aaPredicted RBP10.31□□□□□ -0.76
LDLRAD3-205ENST00000532490 GAGE6Q13070 117 aa10.31□□□□□ -0.76
LDLRAD3-205ENST00000532490 MIAQ16674 131 aa10.31□□□□□ -0.76
LDLRAD3-205ENST00000532490 RASL11AQ6T310 242 aa10.31□□□□□ -0.76
LDLRAD3-205ENST00000532490 ALKAL2Q6UX46 152 aa10.31□□□□□ -0.76
LDLRAD3-205ENST00000532490 RPP21Q9H633 154 aaKnown RBP10.31□□□□□ -0.76
LDLRAD3-205ENST00000532490 FLG2Q5D862 2391 aaPredicted RBP10.31□□□□□ -0.76
LDLRAD3-205ENST00000532490 IGHV1-24A0A0C4DH33 117 aa10.3□□□□□ -0.76
LDLRAD3-205ENST00000532490 TMEM250H0YL14 139 aa10.3□□□□□ -0.76
LDLRAD3-205ENST00000532490 BLOC1S1P78537 153 aa10.3□□□□□ -0.76
LDLRAD3-205ENST00000532490 NIT2Q9NQR4 276 aa10.3□□□□□ -0.76
LDLRAD3-205ENST00000532490 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
LDLRAD3-205ENST00000532490 GTSF1Q8WW33 167 aa10.29□□□□□ -0.76
LDLRAD3-205ENST00000532490 TWIST1Q15672 202 aa10.28□□□□□ -0.76
LDLRAD3-205ENST00000532490 C14orf177Q52M58 125 aa10.28□□□□□ -0.76
LDLRAD3-205ENST00000532490 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
LDLRAD3-205ENST00000532490 PGLYRP4Q96LB8 373 aa10.28□□□□□ -0.76
LDLRAD3-205ENST00000532490 A0A1B0GUV1 79 aa10.27□□□□□ -0.77
LDLRAD3-205ENST00000532490 USP17L23D6RBM5 183 aa10.27□□□□□ -0.77
LDLRAD3-205ENST00000532490 CLPSL2Q6UWE3 100 aa10.27□□□□□ -0.77
LDLRAD3-205ENST00000532490 SCXQ7RTU7 201 aa10.27□□□□□ -0.77
LDLRAD3-205ENST00000532490 GATD1Q8NB37 220 aa10.27□□□□□ -0.77
LDLRAD3-205ENST00000532490 PRSS1P07477 247 aa10.26□□□□□ -0.77
LDLRAD3-205ENST00000532490 FAM231DQ6ZW35 169 aa10.26□□□□□ -0.77
LDLRAD3-205ENST00000532490 TMEM243Q9BU79 118 aa10.26□□□□□ -0.77
LDLRAD3-205ENST00000532490 DMBT1Q9UGM3 2413 aaPredicted RBP10.26□□□□□ -0.77
LDLRAD3-205ENST00000532490 IGLV4-60A0A075B6I1 120 aa10.25□□□□□ -0.77
LDLRAD3-205ENST00000532490 HLA-DQA1P01909 254 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms