RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 CACNA1EQ15878 2313 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 GBF1Q92538 1859 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 C6orf99Q4VX62 202 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 RNF185Q96GF1 192 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 Q96MF0 132 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 PSME4Q14997 1843 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 WNK3Q9BYP7 1800 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 IGKV1-17P01599 117 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 UBE2D1P51668 147 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 VPREB3Q9UKI3 123 aa6.22□□□□□ -1.41
CTNND1-231ENST00000532463 GVINP1Q7Z2Y8 2422 aa6.21□□□□□ -1.41
CTNND1-231ENST00000532463 PLXNB2O15031 1838 aa6.21□□□□□ -1.41
CTNND1-231ENST00000532463 TRBV6-1A0A0K0K1D8 114 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 C15orf65H3BRN8 121 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 BEAN1Q3B7T3 259 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 C7orf33Q8WU49 177 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 IL17DQ8TAD2 202 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 IGLV3-19P01714 112 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 XGP55808 180 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 REG3AQ06141 175 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 DIAPH2-AS1Q14236 149 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 COL4A5P29400 1685 aa6.21□□□□□ -1.42
CTNND1-231ENST00000532463 CREBBPQ92793 2442 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 VWCEQ96DN2 955 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 X6R8D5 127 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 FER1L5A0AVI2 2057 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 PLA2G1BP04054 148 aaKnown RBP6.2□□□□□ -1.42
CTNND1-231ENST00000532463 TMEM254Q8TBM7 123 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 RGPD3A6NKT7 1758 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-231ENST00000532463 RGPD4Q7Z3J3 1758 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 COL24A1Q17RW2 1714 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 NYNRINQ9P2P1 1898 aaKnown RBP6.2□□□□□ -1.42
CTNND1-231ENST00000532463 H7C423 109 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 MAPK1IP1LQ8NDC0 245 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 XAGE1AQ9HD64 81 aa6.2□□□□□ -1.42
CTNND1-231ENST00000532463 PCNX2A6NKB5 2137 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 POLR2AP24928 1970 aaKnown RBP6.19□□□□□ -1.42
CTNND1-231ENST00000532463 IGF1P05019 195 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 SHANK3Q9BYB0 1731 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 SLURP1P55000 103 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 HEATR5AQ86XA9 2040 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 A0A1B0GXF2 115 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 Q6ZR03 302 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 C22orf34Q6ZV56 151 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 CHCHD10Q8WYQ3 142 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-231ENST00000532463 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 LINC00269Q8N2A0 174 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 AJUBAQ96IF1 538 aa6.19□□□□□ -1.42
CTNND1-231ENST00000532463 LST1O00453 97 aa6.18□□□□□ -1.42
CTNND1-231ENST00000532463 DEFB136Q30KP8 78 aa6.18□□□□□ -1.42
CTNND1-231ENST00000532463 PYGO1Q9Y3Y4 419 aa6.18□□□□□ -1.42
CTNND1-231ENST00000532463 SPTAN1Q13813 2472 aaKnown RBP6.18□□□□□ -1.42
CTNND1-231ENST00000532463 CEMP1Q6PRD7 247 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-231ENST00000532463 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
CTNND1-231ENST00000532463 PRORYQ9H606 182 aa6.18□□□□□ -1.42
CTNND1-231ENST00000532463 CACNA1BQ00975 2339 aa6.18□□□□□ -1.42
CTNND1-231ENST00000532463 TRBV6-5A0A0K0K1A5 114 aa6.18□□□□□ -1.42
CTNND1-231ENST00000532463 I3L2K1 104 aa6.18□□□□□ -1.42
CTNND1-231ENST00000532463 ESRGQ1W209 222 aa6.18□□□□□ -1.42
CTNND1-231ENST00000532463 LINC00322Q6ZN03 302 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-231ENST00000532463 PHF3Q92576 2039 aaKnown RBP6.18□□□□□ -1.42
CTNND1-231ENST00000532463 LY6LH3BQJ8 138 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 K7EMT4 169 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 CACNA1GO43497 2377 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 DNAJC9-AS1A6NH13 148 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 A8MZ25 164 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 B3GALT5-AS1P59052 145 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 CDKN2A-AS1Q9UH64 79 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-231ENST00000532463 Q6ZS92 163 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 ZNF22P17026 224 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-231ENST00000532463 NEXN-AS1Q8NBZ9 246 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 PPDPFQ9H3Y8 114 aa6.17□□□□□ -1.42
CTNND1-231ENST00000532463 LOC107984640A0A0U1RRK4 108 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 M0R378 163 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 DEFB135Q30KP9 77 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 C1orf147Q96MC9 270 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-231ENST00000532463 GREB1Q4ZG55 1949 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 COL11A2P13942 1736 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-231ENST00000532463 TAF1LQ8IZX4 1826 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 DOCK6Q96HP0 2047 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 IGLV11-55A0A075B6I3 123 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 SPINK1P00995 79 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 K7EIM0 57 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 SYCNQ0VAF6 134 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 DCANP1Q8TF63 244 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 PDCD11Q14690 1871 aaKnown RBP6.16□□□□□ -1.42
CTNND1-231ENST00000532463 PRAC2D3DTV9 90 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 PATE2Q6UY27 113 aa6.16□□□□□ -1.42
CTNND1-231ENST00000532463 CRYGAP11844 174 aa6.15□□□□□ -1.42
CTNND1-231ENST00000532463 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.15□□□□□ -1.42
CTNND1-231ENST00000532463 TP73-AS1Q9UF72 201 aa6.15□□□□□ -1.42
CTNND1-231ENST00000532463 ROS1P08922 2347 aa6.15□□□□□ -1.42
CTNND1-231ENST00000532463 RNASE3P12724 160 aaKnown RBP6.15□□□□□ -1.42
CTNND1-231ENST00000532463 ARID2Q68CP9 1835 aa6.15□□□□□ -1.42
CTNND1-231ENST00000532463 PATJQ8NI35 1801 aa6.15□□□□□ -1.42
CTNND1-231ENST00000532463 PLCE1Q9P212 2302 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms