RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 RPL36ALQ969Q0 106 aaKnown RBP5.75□□□□□ -1.49
USF1-210ENST00000531842 ZFP30Q9Y2G7 519 aa5.75□□□□□ -1.49
USF1-210ENST00000531842 TRBV20OR9-2A0A075B6H5 130 aa5.74□□□□□ -1.49
USF1-210ENST00000531842 RPL19P84098 196 aaKnown RBP5.74□□□□□ -1.49
USF1-210ENST00000531842 LINC01559Q495D7 138 aa5.74□□□□□ -1.49
USF1-210ENST00000531842 ZFP82Q8N141 532 aa5.74□□□□□ -1.49
USF1-210ENST00000531842 C11orf52Q96A22 123 aa5.74□□□□□ -1.49
USF1-210ENST00000531842 SFRP2Q96HF1 295 aa5.74□□□□□ -1.49
USF1-210ENST00000531842 TCEAL7Q9BRU2 100 aa5.74□□□□□ -1.49
USF1-210ENST00000531842 TRBV10-1A0A0K0K1A3 114 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 CRPP02741 224 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 PRSS1P07477 247 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 AKR1C3P42330 323 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 NKX2-5P52952 324 aaPredicted RBP5.73□□□□□ -1.49
USF1-210ENST00000531842 Q0VG73 95 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 C14orf177Q52M58 125 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 AKAP14Q86UN6 197 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 SLC51BQ86UW2 128 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 CHCHD7Q9BUK0 85 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 C1orf43Q9BWL3 253 aa5.73□□□□□ -1.49
USF1-210ENST00000531842 TRBV7-3A0A075B6L6 115 aa5.72□□□□□ -1.49
USF1-210ENST00000531842 RAB19A4D1S5 217 aa5.72□□□□□ -1.49
USF1-210ENST00000531842 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
USF1-210ENST00000531842 CHTF8P0CG12 524 aa5.72□□□□□ -1.49
USF1-210ENST00000531842 RPL35P42766 123 aaKnown RBP5.72□□□□□ -1.49
USF1-210ENST00000531842 UBE2D3P61077 147 aa5.72□□□□□ -1.49
USF1-210ENST00000531842 UBE2D2P62837 147 aa5.72□□□□□ -1.49
USF1-210ENST00000531842 EIF5AP63241 154 aaKnown RBP5.72□□□□□ -1.49
USF1-210ENST00000531842 ENHOQ6UWT2 76 aa5.72□□□□□ -1.49
USF1-210ENST00000531842 C15orf54Q8N8G6 183 aa5.72□□□□□ -1.49
USF1-210ENST00000531842 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.72□□□□□ -1.49
USF1-210ENST00000531842 GNG13Q9P2W3 67 aa5.72□□□□□ -1.49
USF1-210ENST00000531842 F5H697 171 aa5.71□□□□□ -1.5
USF1-210ENST00000531842 HLA-DQA1P01909 254 aa5.71□□□□□ -1.5
USF1-210ENST00000531842 ANGP03950 147 aaKnown RBP5.71□□□□□ -1.5
USF1-210ENST00000531842 RAB5CP51148 216 aa5.71□□□□□ -1.5
USF1-210ENST00000531842 SSTP61278 116 aa5.71□□□□□ -1.5
USF1-210ENST00000531842 ZNF56Q15929 161 aa5.71□□□□□ -1.5
USF1-210ENST00000531842 Q6ZRU5 148 aa5.71□□□□□ -1.5
USF1-210ENST00000531842 BAGE2Q86Y30 109 aa5.71□□□□□ -1.5
USF1-210ENST00000531842 CHCHD5Q9BSY4 110 aa5.71□□□□□ -1.5
USF1-210ENST00000531842 SSBP4Q9BWG4 385 aaPredicted RBP5.71□□□□□ -1.5
USF1-210ENST00000531842 TRBV6-8A0A0A6YYG3 113 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 MUC21A0A0G2JKD1 596 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 MUC21A0A140T8X8 626 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 C19orf71A6NCJ1 209 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 RAB4BP61018 213 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 CLPSL2Q6UWE3 100 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 ALKAL2Q6UX46 152 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 OR10AG1Q8NH19 301 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 LYPD6BQ8NI32 183 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 MANBALQ9NQG1 85 aa5.7□□□□□ -1.5
USF1-210ENST00000531842 SNAI2O43623 268 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 S100A9P06702 114 aaKnown RBP5.69□□□□□ -1.5
USF1-210ENST00000531842 SMIM17P0DL12 118 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 BCL2P10415 239 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 PKIAP61925 76 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 MEF2BQ02080 365 aaPredicted RBP5.69□□□□□ -1.5
USF1-210ENST00000531842 MPV17L2Q567V2 206 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 CENPWQ5EE01 88 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 SPANXN1Q5VSR9 72 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 ATRAIDQ6UW56 229 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 SDIM1Q6ZPB5 146 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 OR10G8Q8NGN5 311 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 KIF25-AS1Q9Y6Z4 181 aa5.69□□□□□ -1.5
USF1-210ENST00000531842 K7EN84 100 aa5.68□□□□□ -1.5
USF1-210ENST00000531842 PHOX2AO14813 284 aa5.68□□□□□ -1.5
USF1-210ENST00000531842 IGLC6P0CF74 106 aa5.68□□□□□ -1.5
USF1-210ENST00000531842 GZMBP10144 247 aa5.68□□□□□ -1.5
USF1-210ENST00000531842 EIF5AL1Q6IS14 154 aaKnown RBP5.68□□□□□ -1.5
USF1-210ENST00000531842 PRR27Q6MZM9 219 aa5.68□□□□□ -1.5
USF1-210ENST00000531842 C9orf163Q8N9P6 203 aa5.68□□□□□ -1.5
USF1-210ENST00000531842 NEXN-AS1Q8NBZ9 246 aa5.68□□□□□ -1.5
USF1-210ENST00000531842 CXCL1P09341 107 aa5.67□□□□□ -1.5
USF1-210ENST00000531842 OR5AL1P0C617 328 aa5.67□□□□□ -1.5
USF1-210ENST00000531842 GAGE6Q13070 117 aa5.67□□□□□ -1.5
USF1-210ENST00000531842 MIAQ16674 131 aa5.67□□□□□ -1.5
USF1-210ENST00000531842 TMEM97Q5BJF2 176 aa5.67□□□□□ -1.5
USF1-210ENST00000531842 DPH3Q96FX2 82 aa5.67□□□□□ -1.5
USF1-210ENST00000531842 TPPP3Q9BW30 176 aa5.67□□□□□ -1.5
USF1-210ENST00000531842 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
USF1-210ENST00000531842 TRBV25-1A0A075B6N4 114 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 A0A087WYN8 130 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 SLPIP03973 132 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 RBX1P62877 108 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 DGAT2L7PQ6IED9 249 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 KRTAP26-1Q6PEX3 210 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 LINC00269Q8N2A0 174 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 OCC1Q8TAD7 63 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 MED9Q9NWA0 146 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 VAX2Q9UIW0 290 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 MUC2Q02817 5179 aa5.66□□□□□ -1.5
USF1-210ENST00000531842 IGLV10-54A0A075B6I4 117 aa5.65□□□□□ -1.5
USF1-210ENST00000531842 PDE6DO43924 150 aa5.65□□□□□ -1.5
USF1-210ENST00000531842 MGPP08493 103 aa5.65□□□□□ -1.5
USF1-210ENST00000531842 NUDT10Q8NFP7 164 aa5.65□□□□□ -1.5
USF1-210ENST00000531842 NUDT11Q96G61 164 aa5.65□□□□□ -1.5
USF1-210ENST00000531842 LINC01600Q96MT4 127 aa5.65□□□□□ -1.5
USF1-210ENST00000531842 AP1S3Q96PC3 154 aa5.65□□□□□ -1.5
USF1-210ENST00000531842 IGHV1-24A0A0C4DH33 117 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms