RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 LIMD2Q9BT23 127 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 TIMM9Q9Y5J7 89 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 HILPDAQ9Y5L2 63 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 MIA3Q5JRA6 1907 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 COL18A1P39060 1754 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 ARFGEF2Q9Y6D5 1785 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 TNS1Q9HBL0 1735 aaKnown RBP2.03□□□□□ -2.08
PTPRK-220ENST00000531466 IGHV3-73A0A0B4J1V6 119 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 IGHV1-3A0A0C4DH29 117 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 TRBV10-2A0A0K0K1G8 114 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 CEBPZOSA8MTT3 80 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 A8MWP4 228 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 C11orf94C9JXX5 98 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 LECT2O14960 151 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 ERC2-IT1O76042 136 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 IGKV1D-33P01593 117 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 IGKV1-33P01594 117 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 CGB3P0DN86 165 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 CGB7P0DN87 165 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 RPL28P46779 137 aaKnown RBP2.03□□□□□ -2.08
PTPRK-220ENST00000531466 SYCNQ0VAF6 134 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 C9orf116Q5BN46 136 aaPredicted RBP2.03□□□□□ -2.08
PTPRK-220ENST00000531466 Q6JHZ5 121 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 LYZL2Q7Z4W2 148 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 Q8N6K4 173 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 Q8N814 137 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 FAM103A1Q9BTL3 118 aaKnown RBP2.03□□□□□ -2.08
PTPRK-220ENST00000531466 CDC42SE1Q9NRR8 79 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 ABRACLQ9P1F3 81 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 LINC00474Q9P2X8 69 aa2.03□□□□□ -2.08
PTPRK-220ENST00000531466 FAM208AQ9UK61 1670 aaKnown RBP2.02□□□□□ -2.09
PTPRK-220ENST00000531466 OTOGLQ3ZCN5 2332 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 LRP4O75096 1905 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 TRBV25-1A0A075B6N4 114 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 IGKV2D-26A0A0A0MRZ7 120 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 A0A1B0GVX0 72 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 A6NDX4 124 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 C2orf70A6NJV1 201 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 CRPP02741 224 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 IFI27P40305 119 aaPredicted RBP2.02□□□□□ -2.09
PTPRK-220ENST00000531466 EDDM3BP56851 147 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 ATXN8Q156A1 80 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 SPANXN5Q5MJ07 72 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 ZNF818PQ6ZRF7 136 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 NDUFA11Q86Y39 141 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 C20orf197Q8N268 126 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 FAM19A2Q8N3H0 131 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 Q8N9W7 124 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 SPTSSBQ8NFR3 76 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 CYSTM1Q9H1C7 97 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 OBSL1O75147 1896 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 DOCK2Q92608 1830 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 COL5A3P25940 1745 aaPredicted RBP2.02□□□□□ -2.09
PTPRK-220ENST00000531466 PLCH1Q4KWH8 1693 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 GCC2Q8IWJ2 1684 aa2.02□□□□□ -2.09
PTPRK-220ENST00000531466 MYO18AQ92614 2054 aaKnown RBP2.02□□□□□ -2.09
PTPRK-220ENST00000531466 HELZP42694 1942 aaKnown RBP2.01□□□□□ -2.09
PTPRK-220ENST00000531466 TSPOAP1O95153 1857 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 DOCK1Q14185 1865 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 BTAF1O14981 1849 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 KIAA1671Q9BY89 1806 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 IGLV3-12A0A075B6K2 115 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 TRAV23DV6A0A075B6W5 121 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 IGHV3-15A0A0B4J1V0 119 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 C19orf71A6NCJ1 209 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 ZNF815PA8K554 130 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 IQCF6A8MYZ5 107 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 HCG22E2RYF7 251 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 H3BVH4 76 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 LEPROTL1O95214 131 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 IGLV1-51P01701 117 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 MIFP14174 115 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 ROMO1P60602 79 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 LYPD5Q6UWN5 251 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 LYZL1Q6UWQ5 148 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 Q8NDZ9 215 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 LINC00574Q9H8X3 128 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 ZNRD1Q9P1U0 126 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 TMEM14AQ9Y6G1 99 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 ICOSQ9Y6W8 199 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 TOP2BQ02880 1626 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 ALKQ9UM73 1620 aa2.01□□□□□ -2.09
PTPRK-220ENST00000531466 HEATR5AQ86XA9 2040 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 IGLV3-32A0A0A0MS00 114 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 TMEM223A0PJW6 202 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 C16orf90A8MZG2 172 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 C5orf67F2Z3F1 127 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 F8WEM9 126 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 H7C2G1 150 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 TRGV3P03979 118 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 BAALC-AS2P0C853 105 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 FAM223AQ8IWN6 122 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 Q8IYB0 196 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 CLECL1Q8IZS7 167 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 MUC7Q8TAX7 377 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 LINC01560Q8TB33 94 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 TMEM254Q8TBM7 123 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 TXNDC17Q9BRA2 123 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 CMC2Q9NRP2 79 aa2□□□□□ -2.09
PTPRK-220ENST00000531466 ADGRB2O60241 1585 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms