RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TCEAL7Q9BRU2 100 aa11.86□□□□□ -0.51
SSSCA1-206ENST00000531405 ZNF471Q9BX82 626 aaPredicted RBP11.86□□□□□ -0.51
SSSCA1-206ENST00000531405 CYTL1Q9NRR1 136 aa11.86□□□□□ -0.51
SSSCA1-206ENST00000531405 F5H697 171 aa11.85□□□□□ -0.51
SSSCA1-206ENST00000531405 SCO2A0A1W2PP80 73 aa11.84□□□□□ -0.51
SSSCA1-206ENST00000531405 GAGE6Q13070 117 aa11.84□□□□□ -0.51
SSSCA1-206ENST00000531405 KRTAP26-1Q6PEX3 210 aa11.84□□□□□ -0.51
SSSCA1-206ENST00000531405 LINC00269Q8N2A0 174 aa11.84□□□□□ -0.51
SSSCA1-206ENST00000531405 C9orf163Q8N9P6 203 aa11.84□□□□□ -0.51
SSSCA1-206ENST00000531405 A0A1B0GV50 99 aa11.83□□□□□ -0.52
SSSCA1-206ENST00000531405 ARPC5O15511 151 aa11.83□□□□□ -0.52
SSSCA1-206ENST00000531405 SNAI2O43623 268 aa11.83□□□□□ -0.52
SSSCA1-206ENST00000531405 RBX1P62877 108 aa11.83□□□□□ -0.52
SSSCA1-206ENST00000531405 SPANXN1Q5VSR9 72 aa11.83□□□□□ -0.52
SSSCA1-206ENST00000531405 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.52
SSSCA1-206ENST00000531405 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.83□□□□□ -0.52
SSSCA1-206ENST00000531405 DERL1Q9BUN8 251 aa11.83□□□□□ -0.52
SSSCA1-206ENST00000531405 PRR34Q9NV39 138 aa11.83□□□□□ -0.52
SSSCA1-206ENST00000531405 CXCL1P09341 107 aa11.82□□□□□ -0.52
SSSCA1-206ENST00000531405 PKIAP61925 76 aa11.82□□□□□ -0.52
SSSCA1-206ENST00000531405 MLST8Q9BVC4 326 aa11.82□□□□□ -0.52
SSSCA1-206ENST00000531405 SSBP4Q9BWG4 385 aaPredicted RBP11.82□□□□□ -0.52
SSSCA1-206ENST00000531405 VAX2Q9UIW0 290 aa11.82□□□□□ -0.52
SSSCA1-206ENST00000531405 OR5AL1P0C617 328 aa11.81□□□□□ -0.52
SSSCA1-206ENST00000531405 BAGE2Q86Y30 109 aa11.81□□□□□ -0.52
SSSCA1-206ENST00000531405 KIF25-AS1Q9Y6Z4 181 aa11.81□□□□□ -0.52
SSSCA1-206ENST00000531405 IGLV10-54A0A075B6I4 117 aa11.8□□□□□ -0.52
SSSCA1-206ENST00000531405 TMEM97Q5BJF2 176 aa11.8□□□□□ -0.52
SSSCA1-206ENST00000531405 SDIM1Q6ZPB5 146 aa11.8□□□□□ -0.52
SSSCA1-206ENST00000531405 SFT2D1Q8WV19 159 aa11.8□□□□□ -0.52
SSSCA1-206ENST00000531405 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
SSSCA1-206ENST00000531405 S100A9P06702 114 aaKnown RBP11.79□□□□□ -0.52
SSSCA1-206ENST00000531405 SMLR1H3BR10 107 aa11.78□□□□□ -0.52
SSSCA1-206ENST00000531405 SMIM17P0DL12 118 aa11.78□□□□□ -0.52
SSSCA1-206ENST00000531405 MT1HL1P0DM35 61 aa11.78□□□□□ -0.52
SSSCA1-206ENST00000531405 FAM213BQ8TBF2 198 aa11.78□□□□□ -0.52
SSSCA1-206ENST00000531405 PFDN1O60925 122 aa11.77□□□□□ -0.53
SSSCA1-206ENST00000531405 REG3AQ06141 175 aa11.77□□□□□ -0.53
SSSCA1-206ENST00000531405 IQCJQ1A5X6 159 aa11.77□□□□□ -0.53
SSSCA1-206ENST00000531405 MBD3L1Q8WWY6 194 aa11.77□□□□□ -0.53
SSSCA1-206ENST00000531405 AP1S3Q96PC3 154 aa11.77□□□□□ -0.53
SSSCA1-206ENST00000531405 IGHV1-24A0A0C4DH33 117 aa11.76□□□□□ -0.53
SSSCA1-206ENST00000531405 MGPP08493 103 aa11.76□□□□□ -0.53
SSSCA1-206ENST00000531405 GZMBP10144 247 aa11.76□□□□□ -0.53
SSSCA1-206ENST00000531405 hDV102S1A0JD36 115 aa11.75□□□□□ -0.53
SSSCA1-206ENST00000531405 TMUB2Q71RG4 321 aa11.75□□□□□ -0.53
SSSCA1-206ENST00000531405 C20orf203Q8NBC4 194 aa11.75□□□□□ -0.53
SSSCA1-206ENST00000531405 CLRN3Q8NCR9 226 aa11.75□□□□□ -0.53
SSSCA1-206ENST00000531405 TPPP3Q9BW30 176 aa11.75□□□□□ -0.53
SSSCA1-206ENST00000531405 M0QY20 66 aa11.74□□□□□ -0.53
SSSCA1-206ENST00000531405 CHTF8P0CG12 524 aa11.74□□□□□ -0.53
SSSCA1-206ENST00000531405 RAB5CP51148 216 aa11.74□□□□□ -0.53
SSSCA1-206ENST00000531405 CNBPP62633 177 aaKnown RBP11.74□□□□□ -0.53
SSSCA1-206ENST00000531405 CIRBPQ14011 172 aaKnown RBP11.74□□□□□ -0.53
SSSCA1-206ENST00000531405 SUMO4Q6EEV6 95 aa11.74□□□□□ -0.53
SSSCA1-206ENST00000531405 GFRA4Q9GZZ7 299 aa11.74□□□□□ -0.53
SSSCA1-206ENST00000531405 TNXBP22105 4242 aa11.74□□□□□ -0.53
SSSCA1-206ENST00000531405 IGLV4-60A0A075B6I1 120 aa11.73□□□□□ -0.53
SSSCA1-206ENST00000531405 A0A0D9SG52 128 aa11.73□□□□□ -0.53
SSSCA1-206ENST00000531405 SLPIP03973 132 aa11.73□□□□□ -0.53
SSSCA1-206ENST00000531405 RPL35P42766 123 aaKnown RBP11.73□□□□□ -0.53
SSSCA1-206ENST00000531405 KCNRGQ8N5I3 272 aa11.73□□□□□ -0.53
SSSCA1-206ENST00000531405 NKX2-5P52952 324 aaPredicted RBP11.72□□□□□ -0.53
SSSCA1-206ENST00000531405 IGHV3-64A0A075B6Q5 118 aa11.71□□□□□ -0.53
SSSCA1-206ENST00000531405 UMAD1C9J7I0 102 aa11.71□□□□□ -0.53
SSSCA1-206ENST00000531405 IGLC6P0CF74 106 aa11.71□□□□□ -0.53
SSSCA1-206ENST00000531405 Q6ZRU5 148 aa11.71□□□□□ -0.53
SSSCA1-206ENST00000531405 FER1L6-AS1Q8NA97 138 aa11.71□□□□□ -0.53
SSSCA1-206ENST00000531405 DPH3Q96FX2 82 aa11.71□□□□□ -0.53
SSSCA1-206ENST00000531405 TMEM243Q9BU79 118 aa11.71□□□□□ -0.53
SSSCA1-206ENST00000531405 A0A087WYN8 130 aa11.7□□□□□ -0.54
SSSCA1-206ENST00000531405 TRAV8-4A0A0B4J246 113 aa11.7□□□□□ -0.54
SSSCA1-206ENST00000531405 H7C1H1 209 aa11.7□□□□□ -0.54
SSSCA1-206ENST00000531405 P01737 135 aa11.7□□□□□ -0.54
SSSCA1-206ENST00000531405 H2AFB1P0C5Y9 115 aa11.7□□□□□ -0.54
SSSCA1-206ENST00000531405 ZNF345Q14585 488 aa11.69□□□□□ -0.54
SSSCA1-206ENST00000531405 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
SSSCA1-206ENST00000531405 OR2D3Q8NGH3 330 aa11.69□□□□□ -0.54
SSSCA1-206ENST00000531405 AP5S1Q9NUS5 200 aa11.69□□□□□ -0.54
SSSCA1-206ENST00000531405 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
SSSCA1-206ENST00000531405 CCL20P78556 96 aa11.68□□□□□ -0.54
SSSCA1-206ENST00000531405 SPACA4Q8TDM5 124 aa11.68□□□□□ -0.54
SSSCA1-206ENST00000531405 LRP2P98164 4655 aa11.68□□□□□ -0.54
SSSCA1-206ENST00000531405 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.67□□□□□ -0.54
SSSCA1-206ENST00000531405 RGS21Q2M5E4 152 aa11.67□□□□□ -0.54
SSSCA1-206ENST00000531405 RASL11AQ6T310 242 aa11.67□□□□□ -0.54
SSSCA1-206ENST00000531405 C11orf52Q96A22 123 aa11.67□□□□□ -0.54
SSSCA1-206ENST00000531405 GNG13Q9P2W3 67 aa11.67□□□□□ -0.54
SSSCA1-206ENST00000531405 C19orf71A6NCJ1 209 aa11.66□□□□□ -0.54
SSSCA1-206ENST00000531405 BCL2L11O43521 198 aa11.66□□□□□ -0.54
SSSCA1-206ENST00000531405 CACNG7P62955 275 aa11.66□□□□□ -0.54
SSSCA1-206ENST00000531405 RNF185Q96GF1 192 aa11.66□□□□□ -0.54
SSSCA1-206ENST00000531405 RAB19A4D1S5 217 aa11.65□□□□□ -0.54
SSSCA1-206ENST00000531405 PHOX2AO14813 284 aa11.65□□□□□ -0.54
SSSCA1-206ENST00000531405 UBE2L6O14933 153 aa11.65□□□□□ -0.54
SSSCA1-206ENST00000531405 SULT1A2P50226 295 aa11.65□□□□□ -0.54
SSSCA1-206ENST00000531405 RPS20P60866 119 aaKnown RBP11.65□□□□□ -0.54
SSSCA1-206ENST00000531405 C15orf56Q8N910 161 aa11.65□□□□□ -0.54
SSSCA1-206ENST00000531405 PGLYRP4Q96LB8 373 aa11.65□□□□□ -0.54
SSSCA1-206ENST00000531405 MANBALQ9NQG1 85 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms