RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 DERL1Q9BUN8 251 aa13.3□□□□□ -0.28
CHKA-206ENST00000531341 hDV102S1A0JD36 115 aa13.29□□□□□ -0.28
CHKA-206ENST00000531341 Q5BKY6 102 aa13.29□□□□□ -0.28
CHKA-206ENST00000531341 FMC1Q96HJ9 113 aa13.29□□□□□ -0.28
CHKA-206ENST00000531341 VAX2Q9UIW0 290 aa13.29□□□□□ -0.28
CHKA-206ENST00000531341 TRBV6-1A0A0K0K1D8 114 aa13.28□□□□□ -0.28
CHKA-206ENST00000531341 CTXND1A0A1B0GTU2 59 aa13.28□□□□□ -0.28
CHKA-206ENST00000531341 LTAP01374 205 aa13.28□□□□□ -0.28
CHKA-206ENST00000531341 PKIAP61925 76 aa13.28□□□□□ -0.28
CHKA-206ENST00000531341 UBE2G1P62253 170 aa13.28□□□□□ -0.28
CHKA-206ENST00000531341 RPL7L1Q6DKI1 246 aaKnown RBP13.28□□□□□ -0.28
CHKA-206ENST00000531341 LINC01600Q96MT4 127 aa13.28□□□□□ -0.28
CHKA-206ENST00000531341 IGHV3-64A0A075B6Q5 118 aa13.27□□□□□ -0.29
CHKA-206ENST00000531341 SSTP61278 116 aa13.27□□□□□ -0.29
CHKA-206ENST00000531341 REG3AQ06141 175 aa13.27□□□□□ -0.29
CHKA-206ENST00000531341 F5H697 171 aa13.26□□□□□ -0.29
CHKA-206ENST00000531341 RAB5CP51148 216 aa13.26□□□□□ -0.29
CHKA-206ENST00000531341 C20orf203Q8NBC4 194 aa13.26□□□□□ -0.29
CHKA-206ENST00000531341 RNF185Q96GF1 192 aa13.26□□□□□ -0.29
CHKA-206ENST00000531341 NKX6-2Q9C056 277 aaPredicted RBP13.26□□□□□ -0.29
CHKA-206ENST00000531341 KIF25-AS1Q9Y6Z4 181 aa13.26□□□□□ -0.29
CHKA-206ENST00000531341 GFRA4Q9GZZ7 299 aa13.25□□□□□ -0.29
CHKA-206ENST00000531341 DPH3P1Q9H4G8 78 aa13.25□□□□□ -0.29
CHKA-206ENST00000531341 PLAC8Q9NZF1 115 aa13.25□□□□□ -0.29
CHKA-206ENST00000531341 TRBV25-1A0A075B6N4 114 aa13.24□□□□□ -0.29
CHKA-206ENST00000531341 TMEM97Q5BJF2 176 aa13.24□□□□□ -0.29
CHKA-206ENST00000531341 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.24□□□□□ -0.29
CHKA-206ENST00000531341 ZNF471Q9BX82 626 aaPredicted RBP13.24□□□□□ -0.29
CHKA-206ENST00000531341 ALG5Q9Y673 324 aa13.24□□□□□ -0.29
CHKA-206ENST00000531341 IGLV4-60A0A075B6I1 120 aa13.23□□□□□ -0.29
CHKA-206ENST00000531341 SNAI2O43623 268 aa13.23□□□□□ -0.29
CHKA-206ENST00000531341 IQCJQ1A5X6 159 aa13.23□□□□□ -0.29
CHKA-206ENST00000531341 SSBP4Q9BWG4 385 aaPredicted RBP13.23□□□□□ -0.29
CHKA-206ENST00000531341 A6NHS1 94 aa13.21□□□□□ -0.29
CHKA-206ENST00000531341 SPANXN1Q5VSR9 72 aa13.21□□□□□ -0.29
CHKA-206ENST00000531341 AP5S1Q9NUS5 200 aa13.21□□□□□ -0.29
CHKA-206ENST00000531341 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.2□□□□□ -0.3
CHKA-206ENST00000531341 IGHV1-24A0A0C4DH33 117 aa13.2□□□□□ -0.3
CHKA-206ENST00000531341 KRTAP10-8P60410 259 aa13.2□□□□□ -0.3
CHKA-206ENST00000531341 COX6A2Q02221 97 aa13.2□□□□□ -0.3
CHKA-206ENST00000531341 CST9LP1Q5W188 147 aa13.2□□□□□ -0.3
CHKA-206ENST00000531341 GTSF1Q8WW33 167 aa13.2□□□□□ -0.3
CHKA-206ENST00000531341 TRAV8-4A0A0B4J246 113 aa13.19□□□□□ -0.3
CHKA-206ENST00000531341 MAP1LC3B2A6NCE7 125 aa13.19□□□□□ -0.3
CHKA-206ENST00000531341 P01737 135 aa13.19□□□□□ -0.3
CHKA-206ENST00000531341 CXCL1P09341 107 aa13.19□□□□□ -0.3
CHKA-206ENST00000531341 AKR1C3P42330 323 aa13.19□□□□□ -0.3
CHKA-206ENST00000531341 INO80EQ8NBZ0 244 aaPredicted RBP13.19□□□□□ -0.3
CHKA-206ENST00000531341 C7orf33Q8WU49 177 aa13.19□□□□□ -0.3
CHKA-206ENST00000531341 MAP1LC3BQ9GZQ8 125 aa13.19□□□□□ -0.3
CHKA-206ENST00000531341 OR5AL1P0C617 328 aa13.18□□□□□ -0.3
CHKA-206ENST00000531341 PRR3P79522 188 aaKnown RBP13.18□□□□□ -0.3
CHKA-206ENST00000531341 C15orf56Q8N910 161 aa13.18□□□□□ -0.3
CHKA-206ENST00000531341 PRSS3P2Q8NHM4 247 aa13.18□□□□□ -0.3
CHKA-206ENST00000531341 MLST8Q9BVC4 326 aa13.18□□□□□ -0.3
CHKA-206ENST00000531341 A0A0J9YXV3 536 aa13.17□□□□□ -0.3
CHKA-206ENST00000531341 M0QY20 66 aa13.17□□□□□ -0.3
CHKA-206ENST00000531341 FHITP49789 147 aa13.17□□□□□ -0.3
CHKA-206ENST00000531341 DEFA1P59665 94 aa13.17□□□□□ -0.3
CHKA-206ENST00000531341 AKR1C8PQ5T2L2 129 aa13.17□□□□□ -0.3
CHKA-206ENST00000531341 BORCS7-ASMTA0A0B4J1R7 106 aa13.16□□□□□ -0.3
CHKA-206ENST00000531341 MAJINQ3KP22 176 aa13.16□□□□□ -0.3
CHKA-206ENST00000531341 WDR73Q6P4I2 378 aa13.16□□□□□ -0.3
CHKA-206ENST00000531341 LYPD6BQ8NI32 183 aa13.16□□□□□ -0.3
CHKA-206ENST00000531341 IGKV2-24A0A0C4DH68 120 aa13.15□□□□□ -0.3
CHKA-206ENST00000531341 A0A1B0GUV1 79 aa13.15□□□□□ -0.3
CHKA-206ENST00000531341 PAGE4O60829 102 aa13.15□□□□□ -0.3
CHKA-206ENST00000531341 SMIM17P0DL12 118 aa13.15□□□□□ -0.3
CHKA-206ENST00000531341 STOML3Q8TAV4 291 aa13.15□□□□□ -0.3
CHKA-206ENST00000531341 TCEAL7Q9BRU2 100 aa13.15□□□□□ -0.3
CHKA-206ENST00000531341 GAS8-AS1O95177 125 aa13.14□□□□□ -0.31
CHKA-206ENST00000531341 HIGD2BQ4VC39 106 aa13.14□□□□□ -0.31
CHKA-206ENST00000531341 SUMO4Q6EEV6 95 aa13.14□□□□□ -0.31
CHKA-206ENST00000531341 SCO2A0A1W2PP80 73 aa13.13□□□□□ -0.31
CHKA-206ENST00000531341 MGPP08493 103 aa13.13□□□□□ -0.31
CHKA-206ENST00000531341 GZMBP10144 247 aa13.13□□□□□ -0.31
CHKA-206ENST00000531341 NKX2-5P52952 324 aaPredicted RBP13.13□□□□□ -0.31
CHKA-206ENST00000531341 BAGE2Q86Y30 109 aa13.13□□□□□ -0.31
CHKA-206ENST00000531341 STPG4Q8N801 248 aa13.13□□□□□ -0.31
CHKA-206ENST00000531341 AP1S3Q96PC3 154 aa13.13□□□□□ -0.31
CHKA-206ENST00000531341 TMEM243Q9BU79 118 aa13.13□□□□□ -0.31
CHKA-206ENST00000531341 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
CHKA-206ENST00000531341 GAGE12HA6NDE8 117 aa13.12□□□□□ -0.31
CHKA-206ENST00000531341 NDUFS6O75380 124 aaKnown RBP13.12□□□□□ -0.31
CHKA-206ENST00000531341 RPS10P46783 165 aaKnown RBP13.12□□□□□ -0.31
CHKA-206ENST00000531341 MED28Q9H204 178 aa13.12□□□□□ -0.31
CHKA-206ENST00000531341 CYTL1Q9NRR1 136 aa13.11□□□□□ -0.31
CHKA-206ENST00000531341 A0A096LNI7 61 aa13.09□□□□□ -0.31
CHKA-206ENST00000531341 IGKV3OR2-268A0A0C4DH90 116 aa13.09□□□□□ -0.31
CHKA-206ENST00000531341 A0A1B0GV50 99 aa13.08□□□□□ -0.32
CHKA-206ENST00000531341 S100A9P06702 114 aaKnown RBP13.08□□□□□ -0.32
CHKA-206ENST00000531341 GIPP09681 153 aaPredicted RBP13.08□□□□□ -0.32
CHKA-206ENST00000531341 SULT1A2P50226 295 aa13.08□□□□□ -0.32
CHKA-206ENST00000531341 SRSF9Q13242 221 aaKnown RBP eCLIP13.08□□□□□ -0.32
CHKA-206ENST00000531341 SPINK6Q6UWN8 80 aa13.08□□□□□ -0.32
CHKA-206ENST00000531341 TPPP3Q9BW30 176 aa13.08□□□□□ -0.32
CHKA-206ENST00000531341 MUC2Q02817 5179 aa13.06□□□□□ -0.32
CHKA-206ENST00000531341 G3V3Q6 166 aa13.06□□□□□ -0.32
CHKA-206ENST00000531341 H7C1H1 209 aa13.06□□□□□ -0.32
CHKA-206ENST00000531341 IGLC6P0CF74 106 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms