RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 PRR34Q9NV39 138 aa5.04□□□□□ -1.6
CD44-232ENST00000531118 PSORS1C2Q9UIG4 136 aa5.04□□□□□ -1.6
CD44-232ENST00000531118 HSPB11Q9Y547 144 aa5.04□□□□□ -1.6
CD44-232ENST00000531118 ALG5Q9Y673 324 aa5.04□□□□□ -1.6
CD44-232ENST00000531118 RHODO00212 210 aa5.03□□□□□ -1.6
CD44-232ENST00000531118 NDUFS6O75380 124 aaKnown RBP5.03□□□□□ -1.6
CD44-232ENST00000531118 TAS2R45P59539 299 aa5.03□□□□□ -1.6
CD44-232ENST00000531118 UBE2D3P61077 147 aa5.03□□□□□ -1.6
CD44-232ENST00000531118 RANP62826 216 aaKnown RBP5.03□□□□□ -1.6
CD44-232ENST00000531118 UBE2D2P62837 147 aa5.03□□□□□ -1.6
CD44-232ENST00000531118 CACNG7P62955 275 aa5.03□□□□□ -1.6
CD44-232ENST00000531118 UBE2L3P68036 154 aaKnown RBP5.03□□□□□ -1.6
CD44-232ENST00000531118 COX6A2Q02221 97 aa5.03□□□□□ -1.6
CD44-232ENST00000531118 RGS21Q2M5E4 152 aa5.03□□□□□ -1.6
CD44-232ENST00000531118 LGALSLQ3ZCW2 172 aaPredicted RBP5.03□□□□□ -1.6
CD44-232ENST00000531118 Q6ZRP5 223 aa5.03□□□□□ -1.6
CD44-232ENST00000531118 MBD2Q9UBB5 411 aa5.03□□□□□ -1.6
CD44-232ENST00000531118 TRBV6-8A0A0A6YYG3 113 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 A0A1W2PPV4 95 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 OR7C2O60412 319 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 ZNF80P51504 273 aaPredicted RBP5.02□□□□□ -1.61
CD44-232ENST00000531118 PKIAP61925 76 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 KHDC3LQ587J8 217 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 FAM74A1Q5RGS3 127 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 PIK3CD-AS1Q5SR53 167 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 GOLT1AQ6ZVE7 132 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 PRR26Q8N8Z3 221 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 INO80EQ8NBZ0 244 aaPredicted RBP5.02□□□□□ -1.61
CD44-232ENST00000531118 SMIM3Q9BZL3 60 aa5.02□□□□□ -1.61
CD44-232ENST00000531118 IGLV10-54A0A075B6I4 117 aa5.01□□□□□ -1.61
CD44-232ENST00000531118 A0A096LNI7 61 aa5.01□□□□□ -1.61
CD44-232ENST00000531118 GIPP09681 153 aaPredicted RBP5.01□□□□□ -1.61
CD44-232ENST00000531118 RPL36AP83881 106 aaKnown RBP5.01□□□□□ -1.61
CD44-232ENST00000531118 FAM74A4Q5TZK3 123 aa5.01□□□□□ -1.61
CD44-232ENST00000531118 PRSS3P2Q8NHM4 247 aa5.01□□□□□ -1.61
CD44-232ENST00000531118 RPL36ALQ969Q0 106 aaKnown RBP5.01□□□□□ -1.61
CD44-232ENST00000531118 HYLS1Q96M11 299 aa5.01□□□□□ -1.61
CD44-232ENST00000531118 CHCHD5Q9BSY4 110 aa5.01□□□□□ -1.61
CD44-232ENST00000531118 BORCS7-ASMTA0A0B4J1R7 106 aa5□□□□□ -1.61
CD44-232ENST00000531118 TRBV10-1A0A0K0K1A3 114 aa5□□□□□ -1.61
CD44-232ENST00000531118 GCGP01275 180 aa5□□□□□ -1.61
CD44-232ENST00000531118 MBP02144 154 aa5□□□□□ -1.61
CD44-232ENST00000531118 RBX1P62877 108 aa5□□□□□ -1.61
CD44-232ENST00000531118 PQLC2Q6ZP29 291 aa5□□□□□ -1.61
CD44-232ENST00000531118 LINC00269Q8N2A0 174 aa5□□□□□ -1.61
CD44-232ENST00000531118 SVIPQ8NHG7 77 aa5□□□□□ -1.61
CD44-232ENST00000531118 CMTM2Q8TAZ6 248 aa5□□□□□ -1.61
CD44-232ENST00000531118 AQP10Q96PS8 301 aa5□□□□□ -1.61
CD44-232ENST00000531118 NDFIP1Q9BT67 221 aa5□□□□□ -1.61
CD44-232ENST00000531118 OTORQ9NRC9 128 aa5□□□□□ -1.61
CD44-232ENST00000531118 GNG5P63218 68 aa4.99□□□□□ -1.61
CD44-232ENST00000531118 SERF2P84101 59 aa4.99□□□□□ -1.61
CD44-232ENST00000531118 C15orf56Q8N910 161 aa4.99□□□□□ -1.61
CD44-232ENST00000531118 OR10G8Q8NGN5 311 aa4.99□□□□□ -1.61
CD44-232ENST00000531118 TRBV7-3A0A075B6L6 115 aa4.98□□□□□ -1.61
CD44-232ENST00000531118 FXYD6-FXYD2A0A087WZ82 144 aa4.98□□□□□ -1.61
CD44-232ENST00000531118 H3BVH4 76 aa4.98□□□□□ -1.61
CD44-232ENST00000531118 IFNA7P01567 189 aa4.98□□□□□ -1.61
CD44-232ENST00000531118 S100A4P26447 101 aaKnown RBP4.98□□□□□ -1.61
CD44-232ENST00000531118 REG3AQ06141 175 aa4.98□□□□□ -1.61
CD44-232ENST00000531118 ARL6IP6Q8N6S5 226 aa4.98□□□□□ -1.61
CD44-232ENST00000531118 SGK494Q96LW2 274 aa4.98□□□□□ -1.61
CD44-232ENST00000531118 PSMG3Q9BT73 122 aaPredicted RBP4.98□□□□□ -1.61
CD44-232ENST00000531118 IGKV3D-20A0A0C4DH25 116 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 K7EQM0 130 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 RPS10P46783 165 aaKnown RBP4.97□□□□□ -1.61
CD44-232ENST00000531118 CDC34P49427 236 aaPredicted RBP4.97□□□□□ -1.61
CD44-232ENST00000531118 GAGE6Q13070 117 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 ZFP69Q49AA0 526 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 HIGD2BQ4VC39 106 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 NEXN-AS1Q8NBZ9 246 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 OR11H4Q8NGC9 324 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 ACTR3CQ9C0K3 210 aaPredicted RBP4.97□□□□□ -1.61
CD44-232ENST00000531118 WFDC1Q9HC57 220 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 IL36BQ9NZH7 164 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 TNFSF18Q9UNG2 199 aa4.97□□□□□ -1.61
CD44-232ENST00000531118 TRAV8-4A0A0B4J246 113 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 SERTM2A0A1B0GWG4 89 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 CXorf1O96002 111 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 P01737 135 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 ATP6V0CP27449 155 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 RAB2AP61019 212 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 SMUG1Q53HV7 270 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 NTM-AS1Q6ZSK4 140 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 SFRP2Q96HF1 295 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 GFRA4Q9GZZ7 299 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 TMEM167BQ9NRX6 74 aa4.96□□□□□ -1.62
CD44-232ENST00000531118 IGLV1-50A0A075B6I6 118 aa4.95□□□□□ -1.62
CD44-232ENST00000531118 HMGB3O15347 200 aaKnown RBP4.95□□□□□ -1.62
CD44-232ENST00000531118 ARPC5O15511 151 aa4.95□□□□□ -1.62
CD44-232ENST00000531118 EIF3GO75821 320 aaKnown RBP eCLIP4.95□□□□□ -1.62
CD44-232ENST00000531118 ARL14EPLP0DKL9 152 aa4.95□□□□□ -1.62
CD44-232ENST00000531118 GZMBP10144 247 aa4.95□□□□□ -1.62
CD44-232ENST00000531118 AKR1C8PQ5T2L2 129 aa4.95□□□□□ -1.62
CD44-232ENST00000531118 C20orf203Q8NBC4 194 aa4.95□□□□□ -1.62
CD44-232ENST00000531118 LINC00474Q9P2X8 69 aa4.95□□□□□ -1.62
CD44-232ENST00000531118 PKIGQ9Y2B9 76 aa4.95□□□□□ -1.62
CD44-232ENST00000531118 TRBV25-1A0A075B6N4 114 aa4.94□□□□□ -1.62
CD44-232ENST00000531118 STAG3L2P0CL84 134 aa4.94□□□□□ -1.62
CD44-232ENST00000531118 STAG3L3P0CL85 134 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms