RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 SSTP61278 116 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 PKIAP61925 76 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 SMAGPQ0VAQ4 97 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 TMEM97Q5BJF2 176 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 MRPL54Q6P161 138 aaKnown RBP3.41□□□□□ -1.86
SSBP3-213ENST00000530618 Q6ZTI0 123 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 NUP35Q8NFH5 326 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 OR10AG1Q8NH19 301 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 MRAP2Q96G30 205 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 TMEM191AQ9H0A3 160 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 C11orf21Q9P2W6 132 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 LAMTOR2Q9Y2Q5 125 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 TNFRSF18Q9Y5U5 241 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 ICOSQ9Y6W8 199 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 URGCP-MRPS24S4R325 110 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 PLAC8L1A1L4L8 177 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 K7EQD1 137 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 IGHV3-53P01767 116 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 G0S2P27469 103 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 SRIP30626 198 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 CKS2P33552 79 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 NANOS2P60321 138 aaKnown RBP3.4□□□□□ -1.87
SSBP3-213ENST00000530618 MRPL23Q16540 153 aaKnown RBP3.4□□□□□ -1.87
SSBP3-213ENST00000530618 CFAP126Q5VTH2 177 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 Q6ZTC4 211 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 LINC00612Q8N6U2 182 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 C14orf178Q8N769 122 aaPredicted RBP3.4□□□□□ -1.87
SSBP3-213ENST00000530618 PHLDA1Q8WV24 401 aaPredicted RBP3.4□□□□□ -1.87
SSBP3-213ENST00000530618 GTSF1Q8WW33 167 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 DNAJC30Q96LL9 226 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 GNB1LQ9BYB4 327 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 HHLA3Q9XRX5 114 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 VPS13BQ7Z7G8 4022 aa3.4□□□□□ -1.87
SSBP3-213ENST00000530618 TRBV24-1A0A075B6N3 115 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 TRAV26-1A0A087WT03 109 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 A0A087WWL8 130 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 MUC21A0A0G2JKD1 596 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 MUC21A0A140T8X8 626 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 IGLL5B9A064 214 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 PHOX2AO14813 284 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 APCSP02743 223 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 SMCPP49901 116 aaPredicted RBP3.39□□□□□ -1.87
SSBP3-213ENST00000530618 CCL18P55774 89 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 C12orf74Q32Q52 190 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 OR10J3Q5JRS4 329 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 CEMP1Q6PRD7 247 aaPredicted RBP3.39□□□□□ -1.87
SSBP3-213ENST00000530618 Q6ZQT7 251 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 DAZ4Q86SG3 579 aaKnown RBP3.39□□□□□ -1.87
SSBP3-213ENST00000530618 ORMDL3Q8N138 153 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 TMEM18Q96B42 140 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 KIR2DL4Q99706 377 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 DAZ3Q9NR90 486 aaKnown RBP3.39□□□□□ -1.87
SSBP3-213ENST00000530618 CELA1Q9UNI1 258 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 TRAPPC1Q9Y5R8 145 aa3.39□□□□□ -1.87
SSBP3-213ENST00000530618 TRBV7-3A0A075B6L6 115 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 IGHV3-73A0A0B4J1V6 119 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 TRAV8-6A0A0B4J262 113 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 LINC01549A6NIU2 74 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 NUDT3O95989 172 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 PRM2P04554 102 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 P0DMU3 169 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 FAM231AP0DMU4 169 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 FAM231CP0DMU5 169 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 GYPEP15421 78 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 GATA1P15976 413 aaPredicted RBP3.38□□□□□ -1.87
SSBP3-213ENST00000530618 RAB5AP20339 215 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 PMCHP20382 165 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 EVI2AP22794 236 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 FCER1GP30273 86 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 CRYBA4P53673 196 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 RAB5BP61020 215 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 FABP9Q0Z7S8 132 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 COTL1Q14019 142 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 FAM104BQ5XKR9 115 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 NEGR1Q7Z3B1 354 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 UBE2DNLQ8IWF7 75 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 ZNF479Q96JC4 524 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 MAP1LC3AQ9H492 121 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 ST20Q9HBF5 79 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 NIT2Q9NQR4 276 aa3.38□□□□□ -1.87
SSBP3-213ENST00000530618 NACAE9PAV3 2078 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 TRBV25-1A0A075B6N4 114 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 TRAV9-2A0A087WT02 112 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 A0A0J9YY99 117 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 A0A1B0GXF2 115 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 K7EMI3 77 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 UBE2L6O14933 153 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 NCR2O95944 276 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 CRYGDP07320 174 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 RPS10P46783 165 aaKnown RBP3.37□□□□□ -1.87
SSBP3-213ENST00000530618 ELOBQ15370 118 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 TMEM88Q6PEY1 159 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 TMEM136Q6ZRR5 245 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 CBLN2Q8IUK8 224 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 AMN1Q8IY45 258 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 SLC25A29Q8N8R3 303 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 GATD1Q8NB37 220 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 ATP6V0E2Q8NHE4 81 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 PRELID3AQ96N28 172 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms