RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TIMM21Q9BVV7 248 aa9.38□□□□□ -0.91
SCN3B-206ENST00000530277 C12orf74Q32Q52 190 aa9.38□□□□□ -0.91
SCN3B-206ENST00000530277 ATRQ13535 2644 aa9.38□□□□□ -0.91
SCN3B-206ENST00000530277 IGLC6P0CF74 106 aa9.38□□□□□ -0.91
SCN3B-206ENST00000530277 TTC32Q5I0X7 151 aa9.38□□□□□ -0.91
SCN3B-206ENST00000530277 DAND5Q8N907 189 aa9.38□□□□□ -0.91
SCN3B-206ENST00000530277 F8W735 103 aaPredicted RBP9.37□□□□□ -0.91
SCN3B-206ENST00000530277 ZNF415Q09FC8 603 aa9.37□□□□□ -0.91
SCN3B-206ENST00000530277 MUC4Q99102 2169 aa9.37□□□□□ -0.91
SCN3B-206ENST00000530277 IGHG2P01859 326 aa9.37□□□□□ -0.91
SCN3B-206ENST00000530277 FGF6P10767 208 aa9.37□□□□□ -0.91
SCN3B-206ENST00000530277 ATP6V0BQ99437 205 aa9.37□□□□□ -0.91
SCN3B-206ENST00000530277 ITPR1Q14643 2758 aa9.37□□□□□ -0.91
SCN3B-206ENST00000530277 SRSF2Q01130 221 aaKnown RBP9.36□□□□□ -0.91
SCN3B-206ENST00000530277 TMEM101Q96IK0 257 aa9.36□□□□□ -0.91
SCN3B-206ENST00000530277 CLPSL2Q6UWE3 100 aa9.36□□□□□ -0.91
SCN3B-206ENST00000530277 C9orf47Q6ZRZ4 202 aa9.36□□□□□ -0.91
SCN3B-206ENST00000530277 TRPT1Q86TN4 253 aaKnown RBP9.36□□□□□ -0.91
SCN3B-206ENST00000530277 VPREB3Q9UKI3 123 aa9.36□□□□□ -0.91
SCN3B-206ENST00000530277 DSCR9P59020 149 aa9.36□□□□□ -0.91
SCN3B-206ENST00000530277 BOD1L2Q8IYS8 172 aa9.36□□□□□ -0.91
SCN3B-206ENST00000530277 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
SCN3B-206ENST00000530277 RNF185Q96GF1 192 aa9.36□□□□□ -0.91
SCN3B-206ENST00000530277 ESM1Q9NQ30 184 aa9.36□□□□□ -0.91
SCN3B-206ENST00000530277 C11orf86A6NJI1 115 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 A8MWV9 139 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 J3QQQ9 107 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 MAPKAPK5-AS1Q8N8E1 139 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 ITPR3Q14573 2671 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 LINC01619G3V211 115 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 INSP01308 110 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 ZFP2Q6ZN57 461 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 ZNF493Q6ZR52 646 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 TRBV20-1A0A075B6N2 111 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 PRIMA1Q86XR5 153 aa9.35□□□□□ -0.91
SCN3B-206ENST00000530277 DLX4Q92988 240 aaPredicted RBP9.35□□□□□ -0.91
SCN3B-206ENST00000530277 B5MCH6 92 aa9.34□□□□□ -0.91
SCN3B-206ENST00000530277 PROK1P58294 105 aa9.34□□□□□ -0.91
SCN3B-206ENST00000530277 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
SCN3B-206ENST00000530277 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
SCN3B-206ENST00000530277 TRAV8-3A0A0A6YYJ7 113 aa9.34□□□□□ -0.91
SCN3B-206ENST00000530277 TRBV7-9A0A0J9YWB2 115 aa9.34□□□□□ -0.91
SCN3B-206ENST00000530277 LINC00158P58513 81 aa9.34□□□□□ -0.91
SCN3B-206ENST00000530277 C18orf65Q6ZTR6 163 aa9.34□□□□□ -0.91
SCN3B-206ENST00000530277 I3L3M4 83 aa9.34□□□□□ -0.91
SCN3B-206ENST00000530277 RASL10AQ92737 203 aa9.34□□□□□ -0.91
SCN3B-206ENST00000530277 CLPSL1A2RUU4 121 aa9.33□□□□□ -0.92
SCN3B-206ENST00000530277 BAALCQ8WXS3 180 aa9.33□□□□□ -0.92
SCN3B-206ENST00000530277 U3KQE9 123 aa9.33□□□□□ -0.92
SCN3B-206ENST00000530277 TNRC6BQ9UPQ9 1833 aaKnown RBP9.33□□□□□ -0.92
SCN3B-206ENST00000530277 CRYBA4P53673 196 aa9.33□□□□□ -0.92
SCN3B-206ENST00000530277 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
SCN3B-206ENST00000530277 PTH2Q96A98 100 aa9.33□□□□□ -0.92
SCN3B-206ENST00000530277 M0R2P5 195 aa9.33□□□□□ -0.92
SCN3B-206ENST00000530277 Q8N6K4 173 aa9.33□□□□□ -0.92
SCN3B-206ENST00000530277 MRPL53Q96EL3 112 aaKnown RBP9.33□□□□□ -0.92
SCN3B-206ENST00000530277 MRPS12O15235 138 aaKnown RBP9.32□□□□□ -0.92
SCN3B-206ENST00000530277 PFN2P35080 140 aa9.32□□□□□ -0.92
SCN3B-206ENST00000530277 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
SCN3B-206ENST00000530277 NOP10Q9NPE3 64 aaKnown RBP9.32□□□□□ -0.92
SCN3B-206ENST00000530277 A6NDX4 124 aa9.32□□□□□ -0.92
SCN3B-206ENST00000530277 NDUFA12Q9UI09 145 aa9.32□□□□□ -0.92
SCN3B-206ENST00000530277 G3V4G9 280 aa9.32□□□□□ -0.92
SCN3B-206ENST00000530277 GAGE6Q13070 117 aa9.32□□□□□ -0.92
SCN3B-206ENST00000530277 LGALS1P09382 135 aaKnown RBP9.31□□□□□ -0.92
SCN3B-206ENST00000530277 EBI3Q14213 229 aa9.31□□□□□ -0.92
SCN3B-206ENST00000530277 SNCGO76070 127 aa9.31□□□□□ -0.92
SCN3B-206ENST00000530277 DNAL4O96015 105 aa9.31□□□□□ -0.92
SCN3B-206ENST00000530277 TEX29Q8N6K0 151 aa9.31□□□□□ -0.92
SCN3B-206ENST00000530277 IGLL5B9A064 214 aa9.31□□□□□ -0.92
SCN3B-206ENST00000530277 GATA3P23771 443 aa9.31□□□□□ -0.92
SCN3B-206ENST00000530277 C2orf91Q6ZV80 131 aa9.31□□□□□ -0.92
SCN3B-206ENST00000530277 ZNF48Q96MX3 618 aaPredicted RBP9.31□□□□□ -0.92
SCN3B-206ENST00000530277 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
SCN3B-206ENST00000530277 DEFB4AO15263 64 aa9.3□□□□□ -0.92
SCN3B-206ENST00000530277 ELANEP08246 267 aa9.29□□□□□ -0.92
SCN3B-206ENST00000530277 KRTAP10-9P60411 292 aa9.29□□□□□ -0.92
SCN3B-206ENST00000530277 LENEPQ9Y5L5 61 aa9.29□□□□□ -0.92
SCN3B-206ENST00000530277 MGAM2Q2M2H8 2515 aa9.29□□□□□ -0.92
SCN3B-206ENST00000530277 PAX4O43316 350 aa9.29□□□□□ -0.92
SCN3B-206ENST00000530277 INSL3P51460 131 aa9.29□□□□□ -0.92
SCN3B-206ENST00000530277 TEP1Q99973 2627 aaKnown RBP9.29□□□□□ -0.92
SCN3B-206ENST00000530277 A0A096LNJ9 63 aa9.29□□□□□ -0.92
SCN3B-206ENST00000530277 TRBV6-1A0A0K0K1D8 114 aa9.29□□□□□ -0.92
SCN3B-206ENST00000530277 A4D1N5 150 aa9.28□□□□□ -0.92
SCN3B-206ENST00000530277 NXPH4O95158 308 aa9.28□□□□□ -0.92
SCN3B-206ENST00000530277 A0A0J9YX75 114 aa9.28□□□□□ -0.92
SCN3B-206ENST00000530277 A8MZ25 164 aa9.28□□□□□ -0.92
SCN3B-206ENST00000530277 WFDC11Q8NEX6 87 aa9.28□□□□□ -0.92
SCN3B-206ENST00000530277 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
SCN3B-206ENST00000530277 SMIM20Q8N5G0 67 aa9.27□□□□□ -0.92
SCN3B-206ENST00000530277 PRO1854Q9UHT4 67 aa9.27□□□□□ -0.92
SCN3B-206ENST00000530277 CCL24O00175 119 aa9.27□□□□□ -0.93
SCN3B-206ENST00000530277 IGHG4P01861 327 aa9.27□□□□□ -0.93
SCN3B-206ENST00000530277 FOXI2Q6ZQN5 318 aa9.27□□□□□ -0.93
SCN3B-206ENST00000530277 TMEM141Q96I45 108 aa9.27□□□□□ -0.93
SCN3B-206ENST00000530277 HELZ2Q9BYK8 2649 aaKnown RBP9.27□□□□□ -0.93
SCN3B-206ENST00000530277 MAST4O15021 2626 aa9.26□□□□□ -0.93
SCN3B-206ENST00000530277 RS1O15537 224 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms