RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 TRBV6-8A0A0A6YYG3 113 aa12.52□□□□□ -0.41
PCNX3-203ENST00000530174 Q8N814 137 aa12.52□□□□□ -0.41
PCNX3-203ENST00000530174 NUDT10Q8NFP7 164 aa12.52□□□□□ -0.41
PCNX3-203ENST00000530174 LYPD6BQ8NI32 183 aa12.52□□□□□ -0.41
PCNX3-203ENST00000530174 NUDT11Q96G61 164 aa12.52□□□□□ -0.41
PCNX3-203ENST00000530174 A0A087WX48 190 aa12.51□□□□□ -0.41
PCNX3-203ENST00000530174 F2Z2F3 143 aa12.51□□□□□ -0.41
PCNX3-203ENST00000530174 K7EN84 100 aa12.51□□□□□ -0.41
PCNX3-203ENST00000530174 MGPP08493 103 aa12.51□□□□□ -0.41
PCNX3-203ENST00000530174 LYZL1Q6UWQ5 148 aa12.51□□□□□ -0.41
PCNX3-203ENST00000530174 Q8N1X5 172 aa12.51□□□□□ -0.41
PCNX3-203ENST00000530174 OCC1Q8TAD7 63 aa12.51□□□□□ -0.41
PCNX3-203ENST00000530174 CHCHD7Q9BUK0 85 aa12.51□□□□□ -0.41
PCNX3-203ENST00000530174 KLK12Q9UKR0 248 aa12.51□□□□□ -0.41
PCNX3-203ENST00000530174 IGLV5-52A0A0A0MRZ9 124 aa12.5□□□□□ -0.41
PCNX3-203ENST00000530174 TMEM250H0YL14 139 aa12.5□□□□□ -0.41
PCNX3-203ENST00000530174 GCSHP23434 173 aa12.5□□□□□ -0.41
PCNX3-203ENST00000530174 WFDC2Q14508 124 aa12.5□□□□□ -0.41
PCNX3-203ENST00000530174 NTN5Q8WTR8 489 aaPredicted RBP12.5□□□□□ -0.41
PCNX3-203ENST00000530174 DNAJC30Q96LL9 226 aa12.5□□□□□ -0.41
PCNX3-203ENST00000530174 RNASE7Q9H1E1 156 aaKnown RBP12.5□□□□□ -0.41
PCNX3-203ENST00000530174 KCNIP4Q6PIL6 250 aa12.49□□□□□ -0.41
PCNX3-203ENST00000530174 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.49□□□□□ -0.41
PCNX3-203ENST00000530174 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
PCNX3-203ENST00000530174 TMEM262E9PQX1 116 aa12.48□□□□□ -0.41
PCNX3-203ENST00000530174 M0QY20 66 aa12.48□□□□□ -0.41
PCNX3-203ENST00000530174 NTF3P20783 257 aa12.48□□□□□ -0.41
PCNX3-203ENST00000530174 CTRLP40313 264 aa12.48□□□□□ -0.41
PCNX3-203ENST00000530174 SUMO4Q6EEV6 95 aa12.48□□□□□ -0.41
PCNX3-203ENST00000530174 LECT2O14960 151 aa12.47□□□□□ -0.41
PCNX3-203ENST00000530174 TRGC1P0CF51 173 aa12.47□□□□□ -0.41
PCNX3-203ENST00000530174 XGP55808 180 aa12.47□□□□□ -0.41
PCNX3-203ENST00000530174 ELOBQ15370 118 aa12.47□□□□□ -0.41
PCNX3-203ENST00000530174 NTM-AS1Q6ZSK4 140 aa12.47□□□□□ -0.41
PCNX3-203ENST00000530174 UBE2WQ96B02 151 aa12.47□□□□□ -0.41
PCNX3-203ENST00000530174 RMI2Q96E14 147 aa12.47□□□□□ -0.41
PCNX3-203ENST00000530174 COX11Q9Y6N1 276 aa12.47□□□□□ -0.41
PCNX3-203ENST00000530174 H7C1H1 209 aa12.46□□□□□ -0.41
PCNX3-203ENST00000530174 CEBPGP53567 150 aa12.46□□□□□ -0.41
PCNX3-203ENST00000530174 MPV17L2Q567V2 206 aa12.46□□□□□ -0.41
PCNX3-203ENST00000530174 TMEM97Q5BJF2 176 aa12.46□□□□□ -0.41
PCNX3-203ENST00000530174 WDR73Q6P4I2 378 aa12.46□□□□□ -0.41
PCNX3-203ENST00000530174 CHCHD5Q9BSY4 110 aa12.46□□□□□ -0.41
PCNX3-203ENST00000530174 IGKV2D-24A0A075B6R9 120 aa12.45□□□□□ -0.42
PCNX3-203ENST00000530174 BAALCQ8WXS3 180 aa12.45□□□□□ -0.42
PCNX3-203ENST00000530174 CNFNQ9BYD5 112 aa12.45□□□□□ -0.42
PCNX3-203ENST00000530174 DPH3P1Q9H4G8 78 aa12.45□□□□□ -0.42
PCNX3-203ENST00000530174 C15orf54Q8N8G6 183 aa12.44□□□□□ -0.42
PCNX3-203ENST00000530174 EIF5A2Q9GZV4 153 aaKnown RBP12.44□□□□□ -0.42
PCNX3-203ENST00000530174 Q0VG73 95 aa12.43□□□□□ -0.42
PCNX3-203ENST00000530174 TWIST1Q15672 202 aa12.43□□□□□ -0.42
PCNX3-203ENST00000530174 RASL11AQ6T310 242 aa12.43□□□□□ -0.42
PCNX3-203ENST00000530174 ATRAIDQ6UW56 229 aa12.43□□□□□ -0.42
PCNX3-203ENST00000530174 GTSF1Q8WW33 167 aa12.43□□□□□ -0.42
PCNX3-203ENST00000530174 TRBV25-1A0A075B6N4 114 aa12.42□□□□□ -0.42
PCNX3-203ENST00000530174 GATCO43716 136 aaKnown RBP12.42□□□□□ -0.42
PCNX3-203ENST00000530174 PKIAP61925 76 aa12.42□□□□□ -0.42
PCNX3-203ENST00000530174 ENHOQ6UWT2 76 aa12.42□□□□□ -0.42
PCNX3-203ENST00000530174 FAM231DQ6ZW35 169 aa12.42□□□□□ -0.42
PCNX3-203ENST00000530174 Q8N976 141 aa12.42□□□□□ -0.42
PCNX3-203ENST00000530174 FAM210AQ96ND0 272 aa12.42□□□□□ -0.42
PCNX3-203ENST00000530174 CRPP02741 224 aa12.41□□□□□ -0.42
PCNX3-203ENST00000530174 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
PCNX3-203ENST00000530174 GAGE6Q13070 117 aa12.41□□□□□ -0.42
PCNX3-203ENST00000530174 IQCJQ1A5X6 159 aa12.41□□□□□ -0.42
PCNX3-203ENST00000530174 SMIM7Q9BQ49 75 aa12.41□□□□□ -0.42
PCNX3-203ENST00000530174 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.4□□□□□ -0.42
PCNX3-203ENST00000530174 IGHV1-24A0A0C4DH33 117 aa12.4□□□□□ -0.42
PCNX3-203ENST00000530174 NDUFS6O75380 124 aaKnown RBP12.4□□□□□ -0.42
PCNX3-203ENST00000530174 NIT2Q9NQR4 276 aa12.4□□□□□ -0.42
PCNX3-203ENST00000530174 RBX1P62877 108 aa12.39□□□□□ -0.43
PCNX3-203ENST00000530174 HAMPP81172 84 aa12.39□□□□□ -0.43
PCNX3-203ENST00000530174 TMEM70Q9BUB7 260 aa12.39□□□□□ -0.43
PCNX3-203ENST00000530174 C1orf43Q9BWL3 253 aa12.39□□□□□ -0.43
PCNX3-203ENST00000530174 A8MWL6 223 aa12.38□□□□□ -0.43
PCNX3-203ENST00000530174 SRP19P09132 144 aaKnown RBP12.38□□□□□ -0.43
PCNX3-203ENST00000530174 LINC01551Q86U37 167 aa12.38□□□□□ -0.43
PCNX3-203ENST00000530174 TRAV26-2A0A0B4J265 109 aa12.37□□□□□ -0.43
PCNX3-203ENST00000530174 ZNF727A8MUV8 499 aa12.37□□□□□ -0.43
PCNX3-203ENST00000530174 EPM2AB3EWF7 344 aa12.37□□□□□ -0.43
PCNX3-203ENST00000530174 CT83Q5H943 113 aa12.37□□□□□ -0.43
PCNX3-203ENST00000530174 GATD1Q8NB37 220 aa12.37□□□□□ -0.43
PCNX3-203ENST00000530174 PGLYRP4Q96LB8 373 aa12.37□□□□□ -0.43
PCNX3-203ENST00000530174 FOXA3P55318 350 aaPredicted RBP12.36□□□□□ -0.43
PCNX3-203ENST00000530174 MIAQ16674 131 aa12.36□□□□□ -0.43
PCNX3-203ENST00000530174 CLPSL2Q6UWE3 100 aa12.36□□□□□ -0.43
PCNX3-203ENST00000530174 SMIM15Q7Z3B0 74 aa12.36□□□□□ -0.43
PCNX3-203ENST00000530174 DEFB104AQ8WTQ1 72 aa12.36□□□□□ -0.43
PCNX3-203ENST00000530174 TMEM243Q9BU79 118 aa12.36□□□□□ -0.43
PCNX3-203ENST00000530174 PRR34Q9NV39 138 aa12.36□□□□□ -0.43
PCNX3-203ENST00000530174 FAM30AQ9NZY2 134 aa12.36□□□□□ -0.43
PCNX3-203ENST00000530174 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
PCNX3-203ENST00000530174 FRZBQ92765 325 aa12.35□□□□□ -0.43
PCNX3-203ENST00000530174 FAT1Q14517 4588 aa12.34□□□□□ -0.43
PCNX3-203ENST00000530174 HLA-DQA1P01909 254 aa12.33□□□□□ -0.44
PCNX3-203ENST00000530174 SMR3BP02814 79 aaPredicted RBP12.33□□□□□ -0.44
PCNX3-203ENST00000530174 COTL1Q14019 142 aa12.33□□□□□ -0.44
PCNX3-203ENST00000530174 LINC01620Q4KN68 170 aa12.33□□□□□ -0.44
PCNX3-203ENST00000530174 Q5VSD8 79 aa12.33□□□□□ -0.44
PCNX3-203ENST00000530174 TSKUQ8WUA8 353 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms