RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 NEXN-AS1Q8NBZ9 246 aa8.53□□□□□ -1.04
CPSF1-204ENST00000529288 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
CPSF1-204ENST00000529288 C1orf43Q9BWL3 253 aa8.53□□□□□ -1.04
CPSF1-204ENST00000529288 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.05
CPSF1-204ENST00000529288 ANGP03950 147 aaKnown RBP8.52□□□□□ -1.05
CPSF1-204ENST00000529288 SMIM17P0DL12 118 aa8.52□□□□□ -1.05
CPSF1-204ENST00000529288 Q0VG73 95 aa8.52□□□□□ -1.05
CPSF1-204ENST00000529288 Q6ZSA8 131 aa8.52□□□□□ -1.05
CPSF1-204ENST00000529288 SCXQ7RTU7 201 aa8.52□□□□□ -1.05
CPSF1-204ENST00000529288 C11orf52Q96A22 123 aa8.52□□□□□ -1.05
CPSF1-204ENST00000529288 CHCHD7Q9BUK0 85 aa8.52□□□□□ -1.05
CPSF1-204ENST00000529288 MLST8Q9BVC4 326 aa8.52□□□□□ -1.05
CPSF1-204ENST00000529288 OR10G8Q8NGN5 311 aa8.51□□□□□ -1.05
CPSF1-204ENST00000529288 TPPP3Q9BW30 176 aa8.51□□□□□ -1.05
CPSF1-204ENST00000529288 MANBALQ9NQG1 85 aa8.51□□□□□ -1.05
CPSF1-204ENST00000529288 GNG13Q9P2W3 67 aa8.51□□□□□ -1.05
CPSF1-204ENST00000529288 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
CPSF1-204ENST00000529288 HLA-DQA1P01909 254 aa8.5□□□□□ -1.05
CPSF1-204ENST00000529288 MPV17L2Q567V2 206 aa8.5□□□□□ -1.05
CPSF1-204ENST00000529288 CLPSL2Q6UWE3 100 aa8.5□□□□□ -1.05
CPSF1-204ENST00000529288 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
CPSF1-204ENST00000529288 DERL1Q9BUN8 251 aa8.5□□□□□ -1.05
CPSF1-204ENST00000529288 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
CPSF1-204ENST00000529288 SNAI2O43623 268 aa8.49□□□□□ -1.05
CPSF1-204ENST00000529288 MGPP08493 103 aa8.49□□□□□ -1.05
CPSF1-204ENST00000529288 CXCL1P09341 107 aa8.49□□□□□ -1.05
CPSF1-204ENST00000529288 GZMBP10144 247 aa8.49□□□□□ -1.05
CPSF1-204ENST00000529288 GAGE6Q13070 117 aa8.49□□□□□ -1.05
CPSF1-204ENST00000529288 C14orf177Q52M58 125 aa8.49□□□□□ -1.05
CPSF1-204ENST00000529288 ALKAL2Q6UX46 152 aa8.49□□□□□ -1.05
CPSF1-204ENST00000529288 DEFB104AQ8WTQ1 72 aa8.49□□□□□ -1.05
CPSF1-204ENST00000529288 CHAC1Q9BUX1 264 aa8.49□□□□□ -1.05
CPSF1-204ENST00000529288 OR5AL1P0C617 328 aa8.48□□□□□ -1.05
CPSF1-204ENST00000529288 BCL2P10415 239 aa8.48□□□□□ -1.05
CPSF1-204ENST00000529288 RPL35P42766 123 aaKnown RBP8.48□□□□□ -1.05
CPSF1-204ENST00000529288 ATRAIDQ6UW56 229 aa8.48□□□□□ -1.05
CPSF1-204ENST00000529288 LYPD6BQ8NI32 183 aa8.48□□□□□ -1.05
CPSF1-204ENST00000529288 CIRBP-AS1Q8TBR5 109 aa8.48□□□□□ -1.05
CPSF1-204ENST00000529288 DAZAP1Q96EP5 407 aaKnown RBP8.48□□□□□ -1.05
CPSF1-204ENST00000529288 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
CPSF1-204ENST00000529288 USP17L23D6RBM5 183 aa8.47□□□□□ -1.05
CPSF1-204ENST00000529288 IGLV2-8P01709 118 aa8.47□□□□□ -1.05
CPSF1-204ENST00000529288 PKIAP61925 76 aa8.47□□□□□ -1.05
CPSF1-204ENST00000529288 MEF2BQ02080 365 aaPredicted RBP8.47□□□□□ -1.05
CPSF1-204ENST00000529288 AP1S3Q96PC3 154 aa8.47□□□□□ -1.05
CPSF1-204ENST00000529288 TRBV20OR9-2A0A075B6H5 130 aa8.46□□□□□ -1.06
CPSF1-204ENST00000529288 RBX1P62877 108 aa8.46□□□□□ -1.06
CPSF1-204ENST00000529288 TMEM97Q5BJF2 176 aa8.46□□□□□ -1.06
CPSF1-204ENST00000529288 NTM-AS1Q6ZSK4 140 aa8.46□□□□□ -1.06
CPSF1-204ENST00000529288 LINC00269Q8N2A0 174 aa8.46□□□□□ -1.06
CPSF1-204ENST00000529288 OR2D3Q8NGH3 330 aa8.46□□□□□ -1.06
CPSF1-204ENST00000529288 TRBV25-1A0A075B6N4 114 aa8.45□□□□□ -1.06
CPSF1-204ENST00000529288 RAB19A4D1S5 217 aa8.45□□□□□ -1.06
CPSF1-204ENST00000529288 TEX46H3BTG2 121 aa8.45□□□□□ -1.06
CPSF1-204ENST00000529288 MIAQ16674 131 aa8.45□□□□□ -1.06
CPSF1-204ENST00000529288 CENPWQ5EE01 88 aa8.45□□□□□ -1.06
CPSF1-204ENST00000529288 FER1L6-AS1Q8NA97 138 aa8.45□□□□□ -1.06
CPSF1-204ENST00000529288 KIF25-AS1Q9Y6Z4 181 aa8.45□□□□□ -1.06
CPSF1-204ENST00000529288 IGHV1-24A0A0C4DH33 117 aa8.44□□□□□ -1.06
CPSF1-204ENST00000529288 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
CPSF1-204ENST00000529288 PDE6DO43924 150 aa8.44□□□□□ -1.06
CPSF1-204ENST00000529288 RPS20P60866 119 aaKnown RBP8.44□□□□□ -1.06
CPSF1-204ENST00000529288 VAX2Q9UIW0 290 aa8.44□□□□□ -1.06
CPSF1-204ENST00000529288 IGLV10-54A0A075B6I4 117 aa8.43□□□□□ -1.06
CPSF1-204ENST00000529288 H7C1H1 209 aa8.43□□□□□ -1.06
CPSF1-204ENST00000529288 IFNA1P01562 189 aa8.43□□□□□ -1.06
CPSF1-204ENST00000529288 PRSS1P07477 247 aa8.43□□□□□ -1.06
CPSF1-204ENST00000529288 GNG4P50150 75 aa8.43□□□□□ -1.06
CPSF1-204ENST00000529288 SUMO4Q6EEV6 95 aa8.43□□□□□ -1.06
CPSF1-204ENST00000529288 C19orf71A6NCJ1 209 aa8.42□□□□□ -1.06
CPSF1-204ENST00000529288 M0QY20 66 aa8.42□□□□□ -1.06
CPSF1-204ENST00000529288 P01737 135 aa8.42□□□□□ -1.06
CPSF1-204ENST00000529288 TAGLN2P37802 199 aaKnown RBP8.42□□□□□ -1.06
CPSF1-204ENST00000529288 CACNG7P62955 275 aa8.42□□□□□ -1.06
CPSF1-204ENST00000529288 BLOC1S1P78537 153 aa8.42□□□□□ -1.06
CPSF1-204ENST00000529288 MED9Q9NWA0 146 aa8.42□□□□□ -1.06
CPSF1-204ENST00000529288 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
CPSF1-204ENST00000529288 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
CPSF1-204ENST00000529288 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
CPSF1-204ENST00000529288 REG3AQ06141 175 aa8.41□□□□□ -1.06
CPSF1-204ENST00000529288 IQCJQ1A5X6 159 aa8.41□□□□□ -1.06
CPSF1-204ENST00000529288 SMIM12Q96EX1 92 aa8.41□□□□□ -1.06
CPSF1-204ENST00000529288 DGAT2L7PQ6IED9 249 aa8.4□□□□□ -1.06
CPSF1-204ENST00000529288 RASL11AQ6T310 242 aa8.4□□□□□ -1.06
CPSF1-204ENST00000529288 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.06
CPSF1-204ENST00000529288 DPH3Q96FX2 82 aa8.4□□□□□ -1.06
CPSF1-204ENST00000529288 TMEM243Q9BU79 118 aa8.4□□□□□ -1.06
CPSF1-204ENST00000529288 PRR34Q9NV39 138 aa8.4□□□□□ -1.06
CPSF1-204ENST00000529288 F2Z2F3 143 aa8.39□□□□□ -1.07
CPSF1-204ENST00000529288 K7EN84 100 aa8.39□□□□□ -1.07
CPSF1-204ENST00000529288 UBE2L6O14933 153 aa8.39□□□□□ -1.07
CPSF1-204ENST00000529288 TRGC1P0CF51 173 aa8.39□□□□□ -1.07
CPSF1-204ENST00000529288 IGLV4-60A0A075B6I1 120 aa8.38□□□□□ -1.07
CPSF1-204ENST00000529288 hDV102S1A0JD36 115 aa8.38□□□□□ -1.07
CPSF1-204ENST00000529288 TMEM250H0YL14 139 aa8.38□□□□□ -1.07
CPSF1-204ENST00000529288 NTF3P20783 257 aa8.38□□□□□ -1.07
CPSF1-204ENST00000529288 KRTAP10-4P60372 401 aaPredicted RBP8.38□□□□□ -1.07
CPSF1-204ENST00000529288 TWIST1Q15672 202 aa8.38□□□□□ -1.07
CPSF1-204ENST00000529288 KRTAP26-1Q6PEX3 210 aa8.38□□□□□ -1.07
CPSF1-204ENST00000529288 C9orf163Q8N9P6 203 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms