RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 UTF1Q5T230 341 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 SPANXN1Q5VSR9 72 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 TIMM8BQ9Y5J9 83 aaPredicted RBP3.61□□□□□ -1.83
CD44-230ENST00000528922 CELSR2Q9HCU4 2923 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 PKDREJQ9NTG1 2253 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 HIVEP1P15822 2718 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 NBEAL1Q6ZS30 2694 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 TRAV21A0A0B4J279 112 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 IGHV1-69DA0A0B4J2H0 117 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 LOC389332A0A1B0GUA5 103 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 A0A1W2PPM0 123 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 H7C1H1 209 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 SNAI2O43623 268 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 CTSGP08311 255 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 ROS1P08922 2347 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 LEPP41159 167 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 NMUP48645 174 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 RPL32P62910 135 aaKnown RBP3.6□□□□□ -1.83
CD44-230ENST00000528922 ATP5G2Q06055 141 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 KLRB1Q12918 225 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 SCGB2A2Q13296 93 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 MAJINQ3KP22 176 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 VMO1Q7Z5L0 202 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 Q8N6K4 173 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 OR10J6PQ8NGY7 276 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 ZNF502Q8TBZ5 544 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 USMG5Q96IX5 58 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 SPAG8Q99932 426 aaPredicted RBP3.6□□□□□ -1.83
CD44-230ENST00000528922 DPH3P1Q9H4G8 78 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 SPANXA1Q9NS26 97 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 DHRS4-AS1Q9P1J3 65 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 ZNRD1Q9P1U0 126 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 SPCS1Q9Y6A9 102 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 WNK2Q9Y3S1 2297 aa3.6□□□□□ -1.83
CD44-230ENST00000528922 ATRQ13535 2644 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 A0A087WX48 190 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 IGHV3-21A0A0B4J1V1 117 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 CENPVL3A0A0U1RRI6 287 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 A0A1W2PRD5 423 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 A0A1W2PRF3 423 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 A0A1W2PRM7 423 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 OR11H12B2RN74 326 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 F8VRH5 84 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 G3V4G9 280 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 H3BUT2 72 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 K7ENP7 123 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 NDUFA4O00483 81 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 NPYP01303 97 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 FGF6P10767 208 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 COL8A2P25067 703 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 S100A4P26447 101 aaKnown RBP3.59□□□□□ -1.83
CD44-230ENST00000528922 CNTFRP26992 372 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 CRIP1P50238 77 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 KRTAP10-3P60369 221 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 UFSP1Q6NVU6 142 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 ADAMTSL5Q6ZMM2 481 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 C2orf91Q6ZV80 131 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 CEND1Q8N111 149 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 OR11H1Q8NG94 326 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 OR11H2Q8NH07 326 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 Q9HAA7 133 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 HILPDAQ9Y5L2 63 aa3.59□□□□□ -1.83
CD44-230ENST00000528922 HIVEP3Q5T1R4 2406 aa3.59□□□□□ -1.84
CD44-230ENST00000528922 TRBV20-1A0A075B6N2 111 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 TRAV8-6A0A0B4J262 113 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 TMEM213A2RRL7 107 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 H3BTX0 84 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 M0R3E3 92 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 NDUFS8O00217 210 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 CCL21O00585 134 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 APELAP0DMC3 54 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 ASIPP42127 132 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 LINC00173Q6ZV60 143 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 ATP6V0E2Q8NHE4 81 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 TMEM141Q96I45 108 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 FOXC2Q99958 501 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 CHAC1Q9BUX1 264 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 SPANXDQ9BXN6 97 aa3.58□□□□□ -1.84
CD44-230ENST00000528922 TRBV25-1A0A075B6N4 114 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 IGKV2-40A0A087WW87 121 aaPredicted RBP3.57□□□□□ -1.84
CD44-230ENST00000528922 TMSB15BA0A087X1C1 80 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 A0A096LNJ9 63 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 IGHV7-81A0A0B4J1V7 117 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 A0A1B0GV72 72 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 TMEM262E9PQX1 116 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 IGKV2D-40P01614 121 aaPredicted RBP3.57□□□□□ -1.84
CD44-230ENST00000528922 EFNA4P52798 201 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 FOXI2Q6ZQN5 318 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 NEGR1Q7Z3B1 354 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 Q8N9W7 124 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 TMEM158Q8WZ71 300 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 TOMM6Q96B49 74 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 RNF185Q96GF1 192 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 HIST1H4GQ99525 98 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 KIR2DL4Q99706 377 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 SIGMAR1Q99720 223 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 SMIM2Q9BVW6 85 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 PRR34Q9NV39 138 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 SH3BGRL2Q9UJC5 107 aa3.57□□□□□ -1.84
CD44-230ENST00000528922 CHTOPQ9Y3Y2 248 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms