RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 PRO0461Q9UI25 63 aa13.9□□□□□ -0.18
TM9SF1-206ENST00000528669 VPREB3Q9UKI3 123 aa13.9□□□□□ -0.18
TM9SF1-206ENST00000528669 CACNA1AO00555 2505 aa13.89□□□□□ -0.19
TM9SF1-206ENST00000528669 FAM208BQ5VWN6 2430 aa13.89□□□□□ -0.19
TM9SF1-206ENST00000528669 IGHV3-73A0A0B4J1V6 119 aa13.89□□□□□ -0.19
TM9SF1-206ENST00000528669 BEX4Q9NWD9 120 aaPredicted RBP13.89□□□□□ -0.19
TM9SF1-206ENST00000528669 TSPAN13O95857 204 aa13.89□□□□□ -0.19
TM9SF1-206ENST00000528669 PRM2P04554 102 aa13.89□□□□□ -0.19
TM9SF1-206ENST00000528669 NSUN5P1Q3KNT7 163 aa13.89□□□□□ -0.19
TM9SF1-206ENST00000528669 TCTEX1D4Q5JR98 221 aa13.89□□□□□ -0.19
TM9SF1-206ENST00000528669 ZNF702PQ9H963 129 aa13.89□□□□□ -0.19
TM9SF1-206ENST00000528669 SLURP1P55000 103 aa13.88□□□□□ -0.19
TM9SF1-206ENST00000528669 RHOHQ15669 191 aa13.88□□□□□ -0.19
TM9SF1-206ENST00000528669 IGHV3-64A0A075B6Q5 118 aa13.87□□□□□ -0.19
TM9SF1-206ENST00000528669 LOC107984156A0A0G2JMH3 177 aa13.87□□□□□ -0.19
TM9SF1-206ENST00000528669 J3QQQ9 107 aa13.87□□□□□ -0.19
TM9SF1-206ENST00000528669 ARL17AQ8IVW1 177 aa13.87□□□□□ -0.19
TM9SF1-206ENST00000528669 ELANEP08246 267 aa13.86□□□□□ -0.19
TM9SF1-206ENST00000528669 PROK1P58294 105 aa13.86□□□□□ -0.19
TM9SF1-206ENST00000528669 C20orf203Q8NBC4 194 aa13.86□□□□□ -0.19
TM9SF1-206ENST00000528669 AMELXQ99217 191 aa13.86□□□□□ -0.19
TM9SF1-206ENST00000528669 I3L3M4 83 aa13.86□□□□□ -0.19
TM9SF1-206ENST00000528669 LGALS3P17931 250 aaKnown RBP13.86□□□□□ -0.19
TM9SF1-206ENST00000528669 UBE2E2Q96LR5 201 aa13.86□□□□□ -0.19
TM9SF1-206ENST00000528669 TRGV11A0A075B6L2 103 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 J3QLI3 93 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 IGHV3-30P01768 117 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 IGHV3-30-5P0DP03 117 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 DEFB131AP59861 70 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 SPAG8Q99932 426 aaPredicted RBP13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 TSSC4Q9Y5U2 329 aaPredicted RBP13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 PSMB2P49721 201 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 INSL3P51460 131 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 NFE4Q86UQ8 179 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 NDUFA11Q86Y39 141 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 SLC25A29Q8N8R3 303 aa13.85□□□□□ -0.19
TM9SF1-206ENST00000528669 Q6YL49 198 aa13.84□□□□□ -0.19
TM9SF1-206ENST00000528669 DUX3Q96PT4 197 aa13.84□□□□□ -0.19
TM9SF1-206ENST00000528669 A0A0J9YXV3 536 aa13.83□□□□□ -0.19
TM9SF1-206ENST00000528669 HIST2H2BDQ6DRA6 164 aa13.83□□□□□ -0.19
TM9SF1-206ENST00000528669 IGLV4-3A0A075B6K6 122 aa13.83□□□□□ -0.2
TM9SF1-206ENST00000528669 TMEM223A0PJW6 202 aa13.83□□□□□ -0.2
TM9SF1-206ENST00000528669 CFC1BP0CG36 223 aa13.83□□□□□ -0.2
TM9SF1-206ENST00000528669 CFC1P0CG37 223 aa13.83□□□□□ -0.2
TM9SF1-206ENST00000528669 DLX4Q92988 240 aaPredicted RBP13.83□□□□□ -0.2
TM9SF1-206ENST00000528669 PRB1P04280 392 aa13.82□□□□□ -0.2
TM9SF1-206ENST00000528669 ZNF22P17026 224 aaPredicted RBP13.82□□□□□ -0.2
TM9SF1-206ENST00000528669 GTSF1LQ9H1H1 148 aa13.82□□□□□ -0.2
TM9SF1-206ENST00000528669 ZFYVE26Q68DK2 2539 aa13.82□□□□□ -0.2
TM9SF1-206ENST00000528669 RBMY1BA6NDE4 496 aaKnown RBP13.82□□□□□ -0.2
TM9SF1-206ENST00000528669 RBMY1EA6NEQ0 496 aaKnown RBP13.82□□□□□ -0.2
TM9SF1-206ENST00000528669 RBMY1DP0C7P1 496 aaKnown RBP13.82□□□□□ -0.2
TM9SF1-206ENST00000528669 VCX2Q9H322 139 aa13.82□□□□□ -0.2
TM9SF1-206ENST00000528669 SMCPP49901 116 aaPredicted RBP13.81□□□□□ -0.2
TM9SF1-206ENST00000528669 Q9UF83 564 aa13.81□□□□□ -0.2
TM9SF1-206ENST00000528669 J3QR89 54 aa13.81□□□□□ -0.2
TM9SF1-206ENST00000528669 RHODO00212 210 aa13.81□□□□□ -0.2
TM9SF1-206ENST00000528669 CR1P17927 2039 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 LEPROTO15243 131 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 IGHV4-31P0DP07 118 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 UBE2D3P61077 147 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 UBE2D2P62837 147 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 CFAP126Q5VTH2 177 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 CEMP1Q6PRD7 247 aaPredicted RBP13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 RNF152Q8N8N0 203 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 LRRK2Q5S007 2527 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 PTPN13Q12923 2485 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 NACAE9PAV3 2078 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 GAGE12HA6NDE8 117 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 TMEM238C9JI98 176 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 FSHBP01225 129 aa13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 ZNF418Q8TF45 676 aaPredicted RBP13.8□□□□□ -0.2
TM9SF1-206ENST00000528669 TEX15Q9BXT5 2789 aa13.79□□□□□ -0.2
TM9SF1-206ENST00000528669 H3BMM0 161 aa13.79□□□□□ -0.2
TM9SF1-206ENST00000528669 RNASE13Q5GAN3 156 aaKnown RBP13.79□□□□□ -0.2
TM9SF1-206ENST00000528669 AZU1P20160 251 aa13.78□□□□□ -0.2
TM9SF1-206ENST00000528669 TMEM61Q8N0U2 210 aa13.78□□□□□ -0.2
TM9SF1-206ENST00000528669 MYO9AB2RTY4 2548 aa13.78□□□□□ -0.2
TM9SF1-206ENST00000528669 ZNF462Q96JM2 2506 aa13.78□□□□□ -0.2
TM9SF1-206ENST00000528669 CD28P10747 220 aa13.78□□□□□ -0.2
TM9SF1-206ENST00000528669 KHDC1LQ5JSQ8 128 aa13.78□□□□□ -0.2
TM9SF1-206ENST00000528669 ABCA12Q86UK0 2595 aa13.77□□□□□ -0.2
TM9SF1-206ENST00000528669 TRAV2A0A0B4J234 112 aa13.77□□□□□ -0.21
TM9SF1-206ENST00000528669 TCL1BO95988 128 aa13.77□□□□□ -0.21
TM9SF1-206ENST00000528669 KRTAP10-9P60411 292 aa13.77□□□□□ -0.21
TM9SF1-206ENST00000528669 Q6ZSN1 163 aa13.77□□□□□ -0.21
TM9SF1-206ENST00000528669 FAM104AQ969W3 186 aa13.77□□□□□ -0.21
TM9SF1-206ENST00000528669 SPXQ9BT56 116 aa13.77□□□□□ -0.21
TM9SF1-206ENST00000528669 A4D1N5 150 aa13.76□□□□□ -0.21
TM9SF1-206ENST00000528669 C10orf126Q8N4M7 172 aa13.76□□□□□ -0.21
TM9SF1-206ENST00000528669 SIGMAR1Q99720 223 aa13.76□□□□□ -0.21
TM9SF1-206ENST00000528669 TNFRSF18Q9Y5U5 241 aa13.76□□□□□ -0.21
TM9SF1-206ENST00000528669 SMAGPQ0VAQ4 97 aa13.76□□□□□ -0.21
TM9SF1-206ENST00000528669 PTH2Q96A98 100 aa13.76□□□□□ -0.21
TM9SF1-206ENST00000528669 PRO1854Q9UHT4 67 aa13.76□□□□□ -0.21
TM9SF1-206ENST00000528669 ADARB2-AS1A8MUL3 147 aa13.75□□□□□ -0.21
TM9SF1-206ENST00000528669 EIF4EBP3O60516 100 aaPredicted RBP13.75□□□□□ -0.21
TM9SF1-206ENST00000528669 RAX2Q96IS3 184 aa13.75□□□□□ -0.21
TM9SF1-206ENST00000528669 M0R2P5 195 aa13.74□□□□□ -0.21
TM9SF1-206ENST00000528669 MUSTN1Q8IVN3 82 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms