RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 IZUMO2Q6UXV1 221 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 C7orf65Q6ZTY9 151 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 SIGLECL1Q8N7X8 197 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 PRELID3AQ96N28 172 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 SCGB3A1Q96QR1 104 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 SPANXDQ9BXN6 97 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 TRAPPC1Q9Y5R8 145 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 U3KQK5 164 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 FREM1Q5H8C1 2179 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 NAV2Q8IVL1 2488 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 TANC2Q9HCD6 1990 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 CELSR2Q9HCU4 2923 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 IGLV3-9A0A075B6K5 115 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 IGHV1-18A0A0C4DH31 117 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 FNDC10F2Z333 226 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 TMEM258P61165 79 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 PCBD1P61457 104 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 PATE2Q6UY27 113 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 ZNF705AQ6ZN79 300 aaPredicted RBP3.38□□□□□ -1.87
PCF11-202ENST00000528336 BPIFA4PQ86YQ2 179 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 DYNAPQ8N1N2 210 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 OR10P1Q8NGE3 313 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 OR5H6Q8NGV6 325 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 MIEN1Q9BRT3 115 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 DUSP21Q9H596 190 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 ICOSQ9Y6W8 199 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 ABCA4P78363 2273 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 SETXQ7Z333 2677 aaKnown RBP3.38□□□□□ -1.87
PCF11-202ENST00000528336 DCHS2Q6V1P9 2916 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 CRYBG3Q68DQ2 2970 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 SPG11Q96JI7 2443 aa3.38□□□□□ -1.87
PCF11-202ENST00000528336 FBN2P35556 2912 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 IGLV4-60A0A075B6I1 120 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 IGKV1D-37A0A075B6S9 117 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 M0R129 80 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 SNAPC5O75971 98 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 GYPBP06028 91 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 PYYP10082 97 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 ZNF14P17017 642 aaPredicted RBP3.37□□□□□ -1.87
PCF11-202ENST00000528336 CD24P25063 80 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 SNRPGP62308 76 aaKnown RBP3.37□□□□□ -1.87
PCF11-202ENST00000528336 PABPC1L2AQ5JQF8 200 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 COL5A1-AS1Q5SY13 56 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 LINC01590Q5TEZ4 76 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 Q6ZR03 302 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 LYZL2Q7Z4W2 148 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 C9orf62Q8N4C0 152 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 CYB561D1Q8N8Q1 229 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 WFDC11Q8NEX6 87 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 RBPMSQ93062 196 aaKnown RBP3.37□□□□□ -1.87
PCF11-202ENST00000528336 RNF5Q99942 180 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 COMMD3Q9UBI1 195 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 LHFPL6Q9Y693 200 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 TACC2O95359 2948 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 ITPR2Q14571 2701 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 ROS1P08922 2347 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 POLQO75417 2590 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 APCP25054 2843 aa3.37□□□□□ -1.87
PCF11-202ENST00000528336 CADP27708 2225 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 IGHV3-73A0A0B4J1V6 119 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 C7orf71A4D174 169 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 RER1O15258 196 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 HBDP02042 147 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 TPPP2P59282 170 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 LINC00483Q53H64 154 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 EIF5AL1Q6IS14 154 aaKnown RBP3.36□□□□□ -1.87
PCF11-202ENST00000528336 Q6ZQT7 251 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 GTF2H5Q6ZYL4 71 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
PCF11-202ENST00000528336 Q8NDZ9 215 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 CIB3Q96Q77 187 aaPredicted RBP3.36□□□□□ -1.87
PCF11-202ENST00000528336 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 TXNL4BQ9NX01 149 aaKnown RBP3.36□□□□□ -1.87
PCF11-202ENST00000528336 TAS2R8Q9NYW2 309 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 HSPE1-MOB4S4R3N1 261 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 PRR14LQ5THK1 2151 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 PLCE1Q9P212 2302 aa3.36□□□□□ -1.87
PCF11-202ENST00000528336 HRNRQ86YZ3 2850 aaPredicted RBP3.35□□□□□ -1.87
PCF11-202ENST00000528336 AKAP6Q13023 2319 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 A0A0D9SG52 128 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 E7EQL1 145 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 MPC2O95563 127 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 TCL1BO95988 128 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 MSMBP08118 114 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 TRGC1P0CF51 173 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 BRS3P32247 399 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 FUSP35637 526 aaKnown RBP eCLIP3.35□□□□□ -1.87
PCF11-202ENST00000528336 RPS27P42677 84 aaKnown RBP3.35□□□□□ -1.87
PCF11-202ENST00000528336 XCL1P47992 114 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 EIF2B2P49770 351 aaKnown RBP3.35□□□□□ -1.87
PCF11-202ENST00000528336 ATOH7Q8N100 152 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 BPIFB6Q8NFQ5 453 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 OTOSQ8NHW6 89 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 SPTSSAQ969W0 71 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 RBMXL1Q96E39 390 aaKnown RBP3.35□□□□□ -1.87
PCF11-202ENST00000528336 CCDC168Q8NDH2 2452 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 MAST4O15021 2626 aa3.35□□□□□ -1.87
PCF11-202ENST00000528336 LRBAP50851 2863 aa3.34□□□□□ -1.87
PCF11-202ENST00000528336 TRBV20-1A0A075B6N2 111 aa3.34□□□□□ -1.87
PCF11-202ENST00000528336 TRAV12-2A0A075B6T6 113 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms