RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CEBPGP53567 150 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 RPS20P60866 119 aaKnown RBP6.49□□□□□ -1.37
CHD7-208ENST00000528280 RAB4BP61018 213 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 GAGE1Q13065 139 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 GAGE4Q13068 117 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 GAGE5Q13069 117 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 LAGE3Q14657 143 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 GAGE13Q4V321 117 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 Q6ZSN1 163 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 ISOC2Q96AB3 205 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 IMMP2LQ96T52 175 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 TNFRSF18Q9Y5U5 241 aa6.49□□□□□ -1.37
CHD7-208ENST00000528280 A0A087WTM6 91 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 TRAV8-3A0A0A6YYJ7 113 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 XKRY2A2RUG3 117 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 OR5AL1P0C617 328 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 RPL36AP83881 106 aaKnown RBP6.48□□□□□ -1.37
CHD7-208ENST00000528280 FAM74A4Q5TZK3 123 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 SPANXN1Q5VSR9 72 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 KCNIP4Q6PIL6 250 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 RPL36ALQ969Q0 106 aaKnown RBP6.48□□□□□ -1.37
CHD7-208ENST00000528280 C11orf52Q96A22 123 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 SSBP4Q9BWG4 385 aaPredicted RBP6.48□□□□□ -1.37
CHD7-208ENST00000528280 SAMD10Q9BYL1 202 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 JPT2Q9H910 190 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 COX11Q9Y6N1 276 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 URGCP-MRPS24S4R325 110 aa6.48□□□□□ -1.37
CHD7-208ENST00000528280 TRBV7-3A0A075B6L6 115 aa6.47□□□□□ -1.37
CHD7-208ENST00000528280 A0A087WWL8 130 aa6.47□□□□□ -1.37
CHD7-208ENST00000528280 SMIM17P0DL12 118 aa6.47□□□□□ -1.37
CHD7-208ENST00000528280 RPS10P46783 165 aaKnown RBP6.47□□□□□ -1.37
CHD7-208ENST00000528280 AKR1D1P51857 326 aa6.47□□□□□ -1.37
CHD7-208ENST00000528280 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
CHD7-208ENST00000528280 SNRPEP62304 92 aaKnown RBP6.47□□□□□ -1.37
CHD7-208ENST00000528280 RPL23P62829 140 aaKnown RBP6.47□□□□□ -1.37
CHD7-208ENST00000528280 Q8N1X5 172 aa6.47□□□□□ -1.37
CHD7-208ENST00000528280 C14orf178Q8N769 122 aaPredicted RBP6.47□□□□□ -1.37
CHD7-208ENST00000528280 TRAV9-1A0A075B6T8 112 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 F2Z2F3 143 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 SNAI2O43623 268 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 IGHV3-30P01768 117 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 IGHV3-33P01772 117 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 LINC00694P0DN24 101 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 IGHV3-30-3P0DP02 117 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 IGHV3-30-5P0DP03 117 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 GNG4P50150 75 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 PKIAP61925 76 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 ADIRFQ15847 76 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 TMEM97Q5BJF2 176 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 PRR27Q6MZM9 219 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 NTN5Q8WTR8 489 aaPredicted RBP6.46□□□□□ -1.38
CHD7-208ENST00000528280 RMI2Q96E14 147 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 CHCHD7Q9BUK0 85 aa6.46□□□□□ -1.38
CHD7-208ENST00000528280 F5H697 171 aa6.45□□□□□ -1.38
CHD7-208ENST00000528280 CACNG7P62955 275 aa6.45□□□□□ -1.38
CHD7-208ENST00000528280 FABP9Q0Z7S8 132 aa6.45□□□□□ -1.38
CHD7-208ENST00000528280 CENPWQ5EE01 88 aa6.45□□□□□ -1.38
CHD7-208ENST00000528280 OR10G8Q8NGN5 311 aa6.45□□□□□ -1.38
CHD7-208ENST00000528280 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
CHD7-208ENST00000528280 A0A087WX48 190 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 GATCO43716 136 aaKnown RBP6.44□□□□□ -1.38
CHD7-208ENST00000528280 P01737 135 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 UBE2D3P61077 147 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 UBE2D2P62837 147 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 RPL19P84098 196 aaKnown RBP6.44□□□□□ -1.38
CHD7-208ENST00000528280 WDR73Q6P4I2 378 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 LINC01551Q86U37 167 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 OR2D3Q8NGH3 330 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 OR10AG1Q8NH19 301 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 C12orf57Q99622 126 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 Q9HAA7 133 aa6.44□□□□□ -1.38
CHD7-208ENST00000528280 TGIF2-C20orf24A0A0A6YYL0 155 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 LRCOL1A6NCL2 159 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 H7C1H1 209 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 GCSHP23434 173 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 Q0VG73 95 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 ZNF56Q15929 161 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 COA6Q5JTJ3 125 aaKnown RBP6.43□□□□□ -1.38
CHD7-208ENST00000528280 DAZ4Q86SG3 579 aaKnown RBP6.43□□□□□ -1.38
CHD7-208ENST00000528280 FER1L6-AS1Q8NA97 138 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 DNAJC30Q96LL9 226 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 AP1S3Q96PC3 154 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 DERL1Q9BUN8 251 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 DAZ3Q9NR90 486 aaKnown RBP6.43□□□□□ -1.38
CHD7-208ENST00000528280 Q9UF83 564 aa6.43□□□□□ -1.38
CHD7-208ENST00000528280 TRBV6-8A0A0A6YYG3 113 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 C19orf71A6NCJ1 209 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 TMEM262E9PQX1 116 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST1H2BKO60814 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 IGLV2-8P01709 118 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST1H2BJP06899 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST1H2BOP23527 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 S100A2P29034 98 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST1H2BBP33778 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST1H2BDP58876 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST1H2BCP62807 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST2H2BEQ16778 126 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 COX19Q49B96 90 aa6.42□□□□□ -1.38
CHD7-208ENST00000528280 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.42□□□□□ -1.38
CHD7-208ENST00000528280 NIT1Q86X76 327 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms