RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 GAGE5Q13069 117 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 MRPL23Q16540 153 aaKnown RBP8.83□□□□□ -1
SCN3B-205ENST00000528267 GAGE13Q4V321 117 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 UBE2DNLQ8IWF7 75 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 NUP35Q8NFH5 326 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 AP1S3Q96PC3 154 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 KRTAP1-5Q9BYS1 174 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 MRPS16Q9Y3D3 137 aaKnown RBP8.83□□□□□ -1
SCN3B-205ENST00000528267 C1orf196B1AJZ1 125 aa8.82□□□□□ -1
SCN3B-205ENST00000528267 ZNF56Q15929 161 aa8.82□□□□□ -1
SCN3B-205ENST00000528267 WDR73Q6P4I2 378 aa8.82□□□□□ -1
SCN3B-205ENST00000528267 NEGR1Q7Z3B1 354 aa8.82□□□□□ -1
SCN3B-205ENST00000528267 UPK3BQ9BT76 320 aa8.82□□□□□ -1
SCN3B-205ENST00000528267 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
SCN3B-205ENST00000528267 M0R2N4 97 aa8.81□□□□□ -1
SCN3B-205ENST00000528267 CCL18P55774 89 aa8.81□□□□□ -1
SCN3B-205ENST00000528267 RAB4BP61018 213 aa8.81□□□□□ -1
SCN3B-205ENST00000528267 MRPL54Q6P161 138 aaKnown RBP8.81□□□□□ -1
SCN3B-205ENST00000528267 Q6ZR54 194 aa8.81□□□□□ -1
SCN3B-205ENST00000528267 NEXN-AS1Q8NBZ9 246 aa8.81□□□□□ -1
SCN3B-205ENST00000528267 PRADC1Q9BSG0 188 aa8.81□□□□□ -1
SCN3B-205ENST00000528267 MGPP08493 103 aa8.8□□□□□ -1
SCN3B-205ENST00000528267 TWIST1Q15672 202 aa8.8□□□□□ -1
SCN3B-205ENST00000528267 COX19Q49B96 90 aa8.8□□□□□ -1
SCN3B-205ENST00000528267 SUMO4Q6EEV6 95 aa8.8□□□□□ -1
SCN3B-205ENST00000528267 ATP5L2Q7Z4Y8 100 aa8.8□□□□□ -1
SCN3B-205ENST00000528267 WFDC10BQ8IUB3 73 aa8.8□□□□□ -1
SCN3B-205ENST00000528267 M0QY20 66 aa8.79□□□□□ -1
SCN3B-205ENST00000528267 TRGC2P03986 189 aa8.79□□□□□ -1
SCN3B-205ENST00000528267 RAB5BP61020 215 aa8.79□□□□□ -1
SCN3B-205ENST00000528267 RASL11AQ6T310 242 aa8.79□□□□□ -1
SCN3B-205ENST00000528267 BORCS7Q96B45 105 aa8.79□□□□□ -1
SCN3B-205ENST00000528267 DPH3P1Q9H4G8 78 aa8.79□□□□□ -1
SCN3B-205ENST00000528267 TRAV26-2A0A0B4J265 109 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 A0A1B0GUT8 65 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 A0A1B0GXF2 115 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 GAS8-AS1O95177 125 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 TRGC1P0CF51 173 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 UBE2D3P61077 147 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 UBE2D2P62837 147 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 HBBP68871 147 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 RIGQ13278 110 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 RNF185Q96GF1 192 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 GNB1LQ9BYB4 327 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 Q9H8V8 135 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 TRAPPC1Q9Y5R8 145 aa8.78□□□□□ -1
SCN3B-205ENST00000528267 PKD1P98161 4303 aa8.77□□□□□ -1
SCN3B-205ENST00000528267 TRBV10-1A0A0K0K1A3 114 aa8.77□□□□□ -1.01
SCN3B-205ENST00000528267 F5H697 171 aa8.77□□□□□ -1.01
SCN3B-205ENST00000528267 HLA-DQA1P01909 254 aa8.77□□□□□ -1.01
SCN3B-205ENST00000528267 MT-ND6P03923 174 aa8.77□□□□□ -1.01
SCN3B-205ENST00000528267 SMIM17P0DL12 118 aa8.77□□□□□ -1.01
SCN3B-205ENST00000528267 TIRAPP58753 221 aa8.77□□□□□ -1.01
SCN3B-205ENST00000528267 TMEM136Q6ZRR5 245 aa8.77□□□□□ -1.01
SCN3B-205ENST00000528267 Q8N3U1 123 aa8.77□□□□□ -1.01
SCN3B-205ENST00000528267 FRZBQ92765 325 aa8.77□□□□□ -1.01
SCN3B-205ENST00000528267 IGHV3-38A0A0C4DH36 116 aa8.76□□□□□ -1.01
SCN3B-205ENST00000528267 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
SCN3B-205ENST00000528267 A0A1B0GW15 77 aa8.76□□□□□ -1.01
SCN3B-205ENST00000528267 S100A8P05109 93 aa8.76□□□□□ -1.01
SCN3B-205ENST00000528267 CAMPP49913 170 aa8.76□□□□□ -1.01
SCN3B-205ENST00000528267 FABP9Q0Z7S8 132 aa8.76□□□□□ -1.01
SCN3B-205ENST00000528267 GATD1Q8NB37 220 aa8.76□□□□□ -1.01
SCN3B-205ENST00000528267 MRPL18Q9H0U6 180 aaKnown RBP8.76□□□□□ -1.01
SCN3B-205ENST00000528267 GTSF1LQ9H1H1 148 aa8.76□□□□□ -1.01
SCN3B-205ENST00000528267 DYNC1H1Q14204 4646 aaKnown RBP8.76□□□□□ -1.01
SCN3B-205ENST00000528267 HECTD4Q9Y4D8 3996 aa8.75□□□□□ -1.01
SCN3B-205ENST00000528267 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
SCN3B-205ENST00000528267 PHOX2AO14813 284 aa8.75□□□□□ -1.01
SCN3B-205ENST00000528267 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
SCN3B-205ENST00000528267 RTL8CO15255 209 aa8.74□□□□□ -1.01
SCN3B-205ENST00000528267 SIVA1O15304 175 aa8.74□□□□□ -1.01
SCN3B-205ENST00000528267 RPL36AP83881 106 aaKnown RBP8.74□□□□□ -1.01
SCN3B-205ENST00000528267 LELP1Q5T871 98 aa8.74□□□□□ -1.01
SCN3B-205ENST00000528267 NTM-AS1Q6ZSK4 140 aa8.74□□□□□ -1.01
SCN3B-205ENST00000528267 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
SCN3B-205ENST00000528267 AMN1Q8IY45 258 aa8.74□□□□□ -1.01
SCN3B-205ENST00000528267 RPL36ALQ969Q0 106 aaKnown RBP8.74□□□□□ -1.01
SCN3B-205ENST00000528267 TMEM191AQ9H0A3 160 aa8.74□□□□□ -1.01
SCN3B-205ENST00000528267 HIST1H2BKO60814 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 APCSP02743 223 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST1H2BJP06899 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 DNAH10OSP0CZ25 163 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 RAB4AP20338 218 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST1H2BOP23527 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST1H2BBP33778 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST1H2BDP58876 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST1H2BCP62807 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST2H2BEQ16778 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.73□□□□□ -1.01
SCN3B-205ENST00000528267 DEFB104AQ8WTQ1 72 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST1H2BHQ93079 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST1H2BNQ99877 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 HIST1H2BMQ99879 126 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 DNAH5Q8TE73 4624 aa8.73□□□□□ -1.01
SCN3B-205ENST00000528267 SMKR1H3BMG3 65 aa8.72□□□□□ -1.01
SCN3B-205ENST00000528267 TNFRSF18Q9Y5U5 241 aa8.72□□□□□ -1.01
SCN3B-205ENST00000528267 NCR2O95944 276 aa8.71□□□□□ -1.02
SCN3B-205ENST00000528267 S100A6P06703 90 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms