RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CIRBP-AS1Q8TBR5 109 aa14.6□□□□□ -0.07
TRAPPC4-208ENST00000527680 KRTAP29-1A8MX34 341 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-208ENST00000527680 H2AFB1P0C5Y9 115 aa14.59□□□□□ -0.07
TRAPPC4-208ENST00000527680 PKIAP61925 76 aa14.59□□□□□ -0.07
TRAPPC4-208ENST00000527680 MLST8Q9BVC4 326 aa14.59□□□□□ -0.07
TRAPPC4-208ENST00000527680 SSBP4Q9BWG4 385 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-208ENST00000527680 SNAI2O43623 268 aa14.58□□□□□ -0.08
TRAPPC4-208ENST00000527680 HLA-DQA1P01909 254 aa14.58□□□□□ -0.08
TRAPPC4-208ENST00000527680 OR5AL1P0C617 328 aa14.58□□□□□ -0.08
TRAPPC4-208ENST00000527680 ZNF345Q14585 488 aa14.58□□□□□ -0.08
TRAPPC4-208ENST00000527680 TMEM97Q5BJF2 176 aa14.58□□□□□ -0.08
TRAPPC4-208ENST00000527680 KANTRA0A1W2PQU2 76 aa14.57□□□□□ -0.08
TRAPPC4-208ENST00000527680 DERL1Q9BUN8 251 aa14.57□□□□□ -0.08
TRAPPC4-208ENST00000527680 A0A0D9SG52 128 aa14.56□□□□□ -0.08
TRAPPC4-208ENST00000527680 USP17L23D6RBM5 183 aa14.56□□□□□ -0.08
TRAPPC4-208ENST00000527680 MIAQ16674 131 aa14.56□□□□□ -0.08
TRAPPC4-208ENST00000527680 TPPP3Q9BW30 176 aa14.55□□□□□ -0.08
TRAPPC4-208ENST00000527680 RPL35P42766 123 aaKnown RBP14.54□□□□□ -0.08
TRAPPC4-208ENST00000527680 EIF5AP63241 154 aaKnown RBP14.54□□□□□ -0.08
TRAPPC4-208ENST00000527680 GAGE6Q13070 117 aa14.54□□□□□ -0.08
TRAPPC4-208ENST00000527680 CLPSL2Q6UWE3 100 aa14.54□□□□□ -0.08
TRAPPC4-208ENST00000527680 NTM-AS1Q6ZSK4 140 aa14.54□□□□□ -0.08
TRAPPC4-208ENST00000527680 DAZAP1Q96EP5 407 aaKnown RBP14.54□□□□□ -0.08
TRAPPC4-208ENST00000527680 AP1S3Q96PC3 154 aa14.54□□□□□ -0.08
TRAPPC4-208ENST00000527680 TRBV25-1A0A075B6N4 114 aa14.53□□□□□ -0.08
TRAPPC4-208ENST00000527680 HMSDA8MTL9 139 aa14.53□□□□□ -0.08
TRAPPC4-208ENST00000527680 BCL2L11O43521 198 aa14.53□□□□□ -0.08
TRAPPC4-208ENST00000527680 IGLV2-8P01709 118 aa14.53□□□□□ -0.08
TRAPPC4-208ENST00000527680 LINC00269Q8N2A0 174 aa14.53□□□□□ -0.08
TRAPPC4-208ENST00000527680 VAX2Q9UIW0 290 aa14.53□□□□□ -0.08
TRAPPC4-208ENST00000527680 MGPP08493 103 aa14.52□□□□□ -0.09
TRAPPC4-208ENST00000527680 RBX1P62877 108 aa14.52□□□□□ -0.09
TRAPPC4-208ENST00000527680 GNG13Q9P2W3 67 aa14.52□□□□□ -0.09
TRAPPC4-208ENST00000527680 GZMBP10144 247 aa14.51□□□□□ -0.09
TRAPPC4-208ENST00000527680 KIF25-AS1Q9Y6Z4 181 aa14.51□□□□□ -0.09
TRAPPC4-208ENST00000527680 PRSS1P07477 247 aa14.5□□□□□ -0.09
TRAPPC4-208ENST00000527680 DGAT2L7PQ6IED9 249 aa14.5□□□□□ -0.09
TRAPPC4-208ENST00000527680 MANBALQ9NQG1 85 aa14.5□□□□□ -0.09
TRAPPC4-208ENST00000527680 H7C1H1 209 aa14.49□□□□□ -0.09
TRAPPC4-208ENST00000527680 CCL20P78556 96 aa14.49□□□□□ -0.09
TRAPPC4-208ENST00000527680 FER1L6-AS1Q8NA97 138 aa14.49□□□□□ -0.09
TRAPPC4-208ENST00000527680 OR2D3Q8NGH3 330 aa14.49□□□□□ -0.09
TRAPPC4-208ENST00000527680 IGHV1-24A0A0C4DH33 117 aa14.48□□□□□ -0.09
TRAPPC4-208ENST00000527680 RPS20P60866 119 aaKnown RBP14.48□□□□□ -0.09
TRAPPC4-208ENST00000527680 PRR34Q9NV39 138 aa14.48□□□□□ -0.09
TRAPPC4-208ENST00000527680 KRTAP10-4P60372 401 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC4-208ENST00000527680 CENPWQ5EE01 88 aa14.47□□□□□ -0.09
TRAPPC4-208ENST00000527680 IGLV10-54A0A075B6I4 117 aa14.46□□□□□ -0.09
TRAPPC4-208ENST00000527680 TEX46H3BTG2 121 aa14.46□□□□□ -0.09
TRAPPC4-208ENST00000527680 M0QY20 66 aa14.46□□□□□ -0.09
TRAPPC4-208ENST00000527680 OXTP01178 125 aa14.46□□□□□ -0.09
TRAPPC4-208ENST00000527680 RPL37AP61513 92 aaKnown RBP14.46□□□□□ -0.09
TRAPPC4-208ENST00000527680 CACNG7P62955 275 aa14.46□□□□□ -0.09
TRAPPC4-208ENST00000527680 IQCJQ1A5X6 159 aa14.46□□□□□ -0.09
TRAPPC4-208ENST00000527680 C9orf163Q8N9P6 203 aa14.46□□□□□ -0.09
TRAPPC4-208ENST00000527680 XKRY2A2RUG3 117 aa14.45□□□□□ -0.1
TRAPPC4-208ENST00000527680 RAB19A4D1S5 217 aa14.45□□□□□ -0.1
TRAPPC4-208ENST00000527680 REG3AQ06141 175 aa14.45□□□□□ -0.1
TRAPPC4-208ENST00000527680 SERTAD4-AS1Q5TG53 156 aa14.45□□□□□ -0.1
TRAPPC4-208ENST00000527680 SUMO4Q6EEV6 95 aa14.45□□□□□ -0.1
TRAPPC4-208ENST00000527680 C11orf52Q96A22 123 aa14.45□□□□□ -0.1
TRAPPC4-208ENST00000527680 IGLC6P0CF74 106 aa14.44□□□□□ -0.1
TRAPPC4-208ENST00000527680 GNG4P50150 75 aa14.44□□□□□ -0.1
TRAPPC4-208ENST00000527680 NKX2-5P52952 324 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-208ENST00000527680 CLRN3Q8NCR9 226 aa14.44□□□□□ -0.1
TRAPPC4-208ENST00000527680 F2Z2F3 143 aa14.43□□□□□ -0.1
TRAPPC4-208ENST00000527680 P01737 135 aa14.43□□□□□ -0.1
TRAPPC4-208ENST00000527680 DPH3Q96FX2 82 aa14.43□□□□□ -0.1
TRAPPC4-208ENST00000527680 TMEM243Q9BU79 118 aa14.43□□□□□ -0.1
TRAPPC4-208ENST00000527680 TRAV1-1A0A0B4J248 108 aa14.42□□□□□ -0.1
TRAPPC4-208ENST00000527680 IFNA1P01562 189 aa14.42□□□□□ -0.1
TRAPPC4-208ENST00000527680 RAB5CP51148 216 aa14.42□□□□□ -0.1
TRAPPC4-208ENST00000527680 EIF5AL1Q6IS14 154 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-208ENST00000527680 KRTAP26-1Q6PEX3 210 aa14.42□□□□□ -0.1
TRAPPC4-208ENST00000527680 RASL11AQ6T310 242 aa14.42□□□□□ -0.1
TRAPPC4-208ENST00000527680 hDV102S1A0JD36 115 aa14.41□□□□□ -0.1
TRAPPC4-208ENST00000527680 TRGC1P0CF51 173 aa14.41□□□□□ -0.1
TRAPPC4-208ENST00000527680 MED9Q9NWA0 146 aa14.41□□□□□ -0.1
TRAPPC4-208ENST00000527680 TRAV8-4A0A0B4J246 113 aa14.4□□□□□ -0.1
TRAPPC4-208ENST00000527680 C19orf71A6NCJ1 209 aa14.4□□□□□ -0.1
TRAPPC4-208ENST00000527680 UBE2L6O14933 153 aa14.4□□□□□ -0.1
TRAPPC4-208ENST00000527680 LYZL1Q6UWQ5 148 aa14.4□□□□□ -0.1
TRAPPC4-208ENST00000527680 NIT2Q9NQR4 276 aa14.4□□□□□ -0.1
TRAPPC4-208ENST00000527680 BIN3Q9NQY0 253 aa14.4□□□□□ -0.1
TRAPPC4-208ENST00000527680 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-208ENST00000527680 NTF3P20783 257 aa14.39□□□□□ -0.11
TRAPPC4-208ENST00000527680 SDIM1Q6ZPB5 146 aa14.39□□□□□ -0.11
TRAPPC4-208ENST00000527680 C20orf203Q8NBC4 194 aa14.39□□□□□ -0.11
TRAPPC4-208ENST00000527680 SMIM12Q96EX1 92 aa14.39□□□□□ -0.11
TRAPPC4-208ENST00000527680 DPH3P1Q9H4G8 78 aa14.39□□□□□ -0.11
TRAPPC4-208ENST00000527680 AP5S1Q9NUS5 200 aa14.39□□□□□ -0.11
TRAPPC4-208ENST00000527680 IGLV4-60A0A075B6I1 120 aa14.38□□□□□ -0.11
TRAPPC4-208ENST00000527680 A0A1B0GUV1 79 aa14.38□□□□□ -0.11
TRAPPC4-208ENST00000527680 PDE6DO43924 150 aa14.38□□□□□ -0.11
TRAPPC4-208ENST00000527680 MEF2BQ02080 365 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC4-208ENST00000527680 COTL1Q14019 142 aa14.36□□□□□ -0.11
TRAPPC4-208ENST00000527680 LRP1Q07954 4544 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-208ENST00000527680 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-208ENST00000527680 PANO1I0J062 215 aa14.35□□□□□ -0.11
TRAPPC4-208ENST00000527680 AMTP48728 403 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms