RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 DEFB135Q30KP9 77 aa13.55□□□□□ -0.24
SMPD1-203ENST00000527275 SUMO4Q6EEV6 95 aa13.55□□□□□ -0.24
SMPD1-203ENST00000527275 TRAV9-2A0A087WT02 112 aa13.55□□□□□ -0.24
SMPD1-203ENST00000527275 MAJINQ3KP22 176 aa13.55□□□□□ -0.24
SMPD1-203ENST00000527275 LBHQ53QV2 105 aaPredicted RBP13.55□□□□□ -0.24
SMPD1-203ENST00000527275 LINC01545Q5VT33 79 aa13.55□□□□□ -0.24
SMPD1-203ENST00000527275 IFI27L1Q96BM0 104 aa13.55□□□□□ -0.24
SMPD1-203ENST00000527275 GOLT1BQ9Y3E0 138 aa13.55□□□□□ -0.24
SMPD1-203ENST00000527275 ZNF415Q09FC8 603 aa13.54□□□□□ -0.24
SMPD1-203ENST00000527275 EREGO14944 169 aa13.53□□□□□ -0.24
SMPD1-203ENST00000527275 DEFB121Q5J5C9 76 aa13.53□□□□□ -0.24
SMPD1-203ENST00000527275 AZU1P20160 251 aa13.52□□□□□ -0.24
SMPD1-203ENST00000527275 C18orf15Q96N68 181 aa13.52□□□□□ -0.24
SMPD1-203ENST00000527275 PMCHL2Q9BQD1 86 aa13.52□□□□□ -0.24
SMPD1-203ENST00000527275 M0R2P5 195 aa13.52□□□□□ -0.25
SMPD1-203ENST00000527275 ZNF56Q15929 161 aa13.52□□□□□ -0.25
SMPD1-203ENST00000527275 ST20Q9HBF5 79 aa13.52□□□□□ -0.25
SMPD1-203ENST00000527275 C11orf72Q8NBR9 251 aa13.51□□□□□ -0.25
SMPD1-203ENST00000527275 MIEN1Q9BRT3 115 aa13.51□□□□□ -0.25
SMPD1-203ENST00000527275 SNHG12Q9BXW3 62 aa13.51□□□□□ -0.25
SMPD1-203ENST00000527275 NUDT3O95989 172 aa13.51□□□□□ -0.25
SMPD1-203ENST00000527275 ORMDL2Q53FV1 153 aa13.51□□□□□ -0.25
SMPD1-203ENST00000527275 K7EMI3 77 aa13.5□□□□□ -0.25
SMPD1-203ENST00000527275 PTH2Q96A98 100 aa13.5□□□□□ -0.25
SMPD1-203ENST00000527275 M0QY20 66 aa13.49□□□□□ -0.25
SMPD1-203ENST00000527275 RPL32P62910 135 aaKnown RBP13.49□□□□□ -0.25
SMPD1-203ENST00000527275 LGALS9BQ3B8N2 356 aa13.49□□□□□ -0.25
SMPD1-203ENST00000527275 PIK3CD-AS1Q5SR53 167 aa13.49□□□□□ -0.25
SMPD1-203ENST00000527275 LGALS9CQ6DKI2 356 aa13.49□□□□□ -0.25
SMPD1-203ENST00000527275 SPXQ9BT56 116 aa13.49□□□□□ -0.25
SMPD1-203ENST00000527275 POLR2KP53803 58 aaKnown RBP13.48□□□□□ -0.25
SMPD1-203ENST00000527275 RNASE8Q8TDE3 154 aaKnown RBP13.48□□□□□ -0.25
SMPD1-203ENST00000527275 X6R8D5 127 aa13.48□□□□□ -0.25
SMPD1-203ENST00000527275 hDV102S1A0JD36 115 aa13.48□□□□□ -0.25
SMPD1-203ENST00000527275 A8MWV9 139 aa13.48□□□□□ -0.25
SMPD1-203ENST00000527275 IGLC3P0DOY3 106 aa13.48□□□□□ -0.25
SMPD1-203ENST00000527275 RRN3P1Q2M238 152 aa13.48□□□□□ -0.25
SMPD1-203ENST00000527275 RNF183Q96D59 192 aa13.48□□□□□ -0.25
SMPD1-203ENST00000527275 TRBV6-5A0A0K0K1A5 114 aa13.47□□□□□ -0.25
SMPD1-203ENST00000527275 SBSPONQ8IVN8 264 aa13.47□□□□□ -0.25
SMPD1-203ENST00000527275 OR11H2Q8NH07 326 aa13.47□□□□□ -0.25
SMPD1-203ENST00000527275 TMEM263Q8WUH6 116 aaKnown RBP13.47□□□□□ -0.25
SMPD1-203ENST00000527275 HSBP1L1C9JCN9 74 aa13.47□□□□□ -0.25
SMPD1-203ENST00000527275 VCYO14598 125 aa13.47□□□□□ -0.25
SMPD1-203ENST00000527275 ATP5LO75964 103 aa13.47□□□□□ -0.25
SMPD1-203ENST00000527275 NEGR1Q7Z3B1 354 aa13.47□□□□□ -0.25
SMPD1-203ENST00000527275 MRAPQ8TCY5 172 aa13.47□□□□□ -0.25
SMPD1-203ENST00000527275 SDHAF1A6NFY7 115 aa13.46□□□□□ -0.25
SMPD1-203ENST00000527275 M0R143 59 aa13.46□□□□□ -0.25
SMPD1-203ENST00000527275 PRSS1P07477 247 aa13.46□□□□□ -0.25
SMPD1-203ENST00000527275 UQCR10Q9UDW1 63 aa13.46□□□□□ -0.25
SMPD1-203ENST00000527275 IGHV3-73A0A0B4J1V6 119 aa13.45□□□□□ -0.26
SMPD1-203ENST00000527275 RETNQ9HD89 108 aa13.45□□□□□ -0.26
SMPD1-203ENST00000527275 MRPL16Q9NX20 251 aaKnown RBP13.45□□□□□ -0.26
SMPD1-203ENST00000527275 PLAC8L1A1L4L8 177 aa13.44□□□□□ -0.26
SMPD1-203ENST00000527275 UFSP1Q6NVU6 142 aa13.44□□□□□ -0.26
SMPD1-203ENST00000527275 TOMM6Q96B49 74 aa13.44□□□□□ -0.26
SMPD1-203ENST00000527275 C16orf74Q96GX8 76 aa13.44□□□□□ -0.26
SMPD1-203ENST00000527275 OVOL2Q9BRP0 275 aa13.44□□□□□ -0.26
SMPD1-203ENST00000527275 SMIM9A6NGZ8 99 aa13.44□□□□□ -0.26
SMPD1-203ENST00000527275 CFAP126Q5VTH2 177 aa13.44□□□□□ -0.26
SMPD1-203ENST00000527275 KIR2DL4Q99706 377 aa13.44□□□□□ -0.26
SMPD1-203ENST00000527275 TRBV27A0A0K0K1C4 114 aa13.43□□□□□ -0.26
SMPD1-203ENST00000527275 TENM3Q9P273 2699 aa13.43□□□□□ -0.26
SMPD1-203ENST00000527275 H7C1H1 209 aa13.42□□□□□ -0.26
SMPD1-203ENST00000527275 EMP1P54849 157 aa13.42□□□□□ -0.26
SMPD1-203ENST00000527275 C2orf66Q6UXQ4 117 aa13.42□□□□□ -0.26
SMPD1-203ENST00000527275 DKK2Q9UBU2 259 aa13.42□□□□□ -0.26
SMPD1-203ENST00000527275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.42□□□□□ -0.26
SMPD1-203ENST00000527275 SCGB3A1Q96QR1 104 aa13.42□□□□□ -0.26
SMPD1-203ENST00000527275 EDA2RQ9HAV5 297 aa13.42□□□□□ -0.26
SMPD1-203ENST00000527275 TP53TG1Q9Y2A0 90 aa13.42□□□□□ -0.26
SMPD1-203ENST00000527275 MEGF8Q7Z7M0 2845 aa13.41□□□□□ -0.26
SMPD1-203ENST00000527275 ODF1Q14990 250 aa13.41□□□□□ -0.26
SMPD1-203ENST00000527275 ZFP2Q6ZN57 461 aa13.41□□□□□ -0.26
SMPD1-203ENST00000527275 IL17DQ8TAD2 202 aa13.41□□□□□ -0.26
SMPD1-203ENST00000527275 DEFB104AQ8WTQ1 72 aa13.41□□□□□ -0.26
SMPD1-203ENST00000527275 DEFB4AO15263 64 aa13.41□□□□□ -0.26
SMPD1-203ENST00000527275 G0S2P27469 103 aa13.41□□□□□ -0.26
SMPD1-203ENST00000527275 Q6ZN92 141 aa13.41□□□□□ -0.26
SMPD1-203ENST00000527275 NOP10Q9NPE3 64 aaKnown RBP13.41□□□□□ -0.26
SMPD1-203ENST00000527275 RS1O15537 224 aa13.4□□□□□ -0.26
SMPD1-203ENST00000527275 IGHV4-28A0A0C4DH34 117 aa13.39□□□□□ -0.27
SMPD1-203ENST00000527275 RHODO00212 210 aa13.39□□□□□ -0.27
SMPD1-203ENST00000527275 MIFP14174 115 aa13.39□□□□□ -0.27
SMPD1-203ENST00000527275 Q8NAQ8 132 aa13.39□□□□□ -0.27
SMPD1-203ENST00000527275 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
SMPD1-203ENST00000527275 DAZ2Q13117 558 aaKnown RBP13.39□□□□□ -0.27
SMPD1-203ENST00000527275 Q6ZSN1 163 aa13.39□□□□□ -0.27
SMPD1-203ENST00000527275 P0DMU3 169 aa13.38□□□□□ -0.27
SMPD1-203ENST00000527275 FAM231AP0DMU4 169 aa13.38□□□□□ -0.27
SMPD1-203ENST00000527275 FAM231CP0DMU5 169 aa13.38□□□□□ -0.27
SMPD1-203ENST00000527275 TM2D3Q9BRN9 247 aa13.38□□□□□ -0.27
SMPD1-203ENST00000527275 ZMAT4Q9H898 229 aa13.38□□□□□ -0.27
SMPD1-203ENST00000527275 CYSLTR1Q9Y271 337 aa13.38□□□□□ -0.27
SMPD1-203ENST00000527275 I3L3M4 83 aa13.37□□□□□ -0.27
SMPD1-203ENST00000527275 HNRNPA3P51991 378 aaKnown RBP13.37□□□□□ -0.27
SMPD1-203ENST00000527275 Q6ZTI0 123 aa13.37□□□□□ -0.27
SMPD1-203ENST00000527275 ERASQ7Z444 233 aa13.37□□□□□ -0.27
SMPD1-203ENST00000527275 MRPL52Q86TS9 123 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms