RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 F5H697 171 aa11.75□□□□□ -0.53
LMX1B-203ENST00000526117 LINC01556Q5JQF7 62 aa11.75□□□□□ -0.53
LMX1B-203ENST00000526117 FRZBQ92765 325 aa11.75□□□□□ -0.53
LMX1B-203ENST00000526117 BORCS7Q96B45 105 aa11.75□□□□□ -0.53
LMX1B-203ENST00000526117 DNAJC30Q96LL9 226 aa11.75□□□□□ -0.53
LMX1B-203ENST00000526117 IGHV3-38A0A0C4DH36 116 aa11.74□□□□□ -0.53
LMX1B-203ENST00000526117 SMIM15Q7Z3B0 74 aa11.74□□□□□ -0.53
LMX1B-203ENST00000526117 C10orf126Q8N4M7 172 aa11.74□□□□□ -0.53
LMX1B-203ENST00000526117 PGLYRP4Q96LB8 373 aa11.74□□□□□ -0.53
LMX1B-203ENST00000526117 SMIM27A0A1W2PRY6 76 aa11.73□□□□□ -0.53
LMX1B-203ENST00000526117 OR10J3Q5JRS4 329 aa11.73□□□□□ -0.53
LMX1B-203ENST00000526117 SUMO4Q6EEV6 95 aa11.73□□□□□ -0.53
LMX1B-203ENST00000526117 NAT8BQ9UHF3 227 aa11.73□□□□□ -0.53
LMX1B-203ENST00000526117 MGPP08493 103 aa11.72□□□□□ -0.53
LMX1B-203ENST00000526117 TMEM97Q5BJF2 176 aa11.72□□□□□ -0.53
LMX1B-203ENST00000526117 RASL11AQ6T310 242 aa11.72□□□□□ -0.53
LMX1B-203ENST00000526117 DAZ4Q86SG3 579 aaKnown RBP11.72□□□□□ -0.53
LMX1B-203ENST00000526117 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
LMX1B-203ENST00000526117 NUP35Q8NFH5 326 aa11.72□□□□□ -0.53
LMX1B-203ENST00000526117 DAZ3Q9NR90 486 aaKnown RBP11.72□□□□□ -0.53
LMX1B-203ENST00000526117 FAT2Q9NYQ8 4349 aa11.71□□□□□ -0.53
LMX1B-203ENST00000526117 DNAH17Q9UFH2 4485 aa11.71□□□□□ -0.53
LMX1B-203ENST00000526117 PPP1R2P9O14990 202 aa11.71□□□□□ -0.53
LMX1B-203ENST00000526117 TMEM191AQ9H0A3 160 aa11.71□□□□□ -0.53
LMX1B-203ENST00000526117 NIT2Q9NQR4 276 aa11.71□□□□□ -0.53
LMX1B-203ENST00000526117 HECTD4Q9Y4D8 3996 aa11.71□□□□□ -0.54
LMX1B-203ENST00000526117 CHCHD7Q9BUK0 85 aa11.7□□□□□ -0.54
LMX1B-203ENST00000526117 A0A1B0GW15 77 aa11.69□□□□□ -0.54
LMX1B-203ENST00000526117 LINC00862A6NCI5 91 aa11.69□□□□□ -0.54
LMX1B-203ENST00000526117 RIGQ13278 110 aa11.69□□□□□ -0.54
LMX1B-203ENST00000526117 NFE4Q86UQ8 179 aa11.69□□□□□ -0.54
LMX1B-203ENST00000526117 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
LMX1B-203ENST00000526117 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
LMX1B-203ENST00000526117 A0A1B0GVY2 172 aa11.68□□□□□ -0.54
LMX1B-203ENST00000526117 TMEM218A2RU14 115 aa11.68□□□□□ -0.54
LMX1B-203ENST00000526117 PRSS29PA6NIE9 313 aa11.68□□□□□ -0.54
LMX1B-203ENST00000526117 LAGE3Q14657 143 aa11.68□□□□□ -0.54
LMX1B-203ENST00000526117 Q6ZRN7 208 aaPredicted RBP11.68□□□□□ -0.54
LMX1B-203ENST00000526117 GATD1Q8NB37 220 aa11.68□□□□□ -0.54
LMX1B-203ENST00000526117 ANAPC16Q96DE5 110 aa11.68□□□□□ -0.54
LMX1B-203ENST00000526117 IBA57-AS1B1ANH7 110 aa11.67□□□□□ -0.54
LMX1B-203ENST00000526117 PKIAP61925 76 aa11.66□□□□□ -0.54
LMX1B-203ENST00000526117 NIT1Q86X76 327 aa11.66□□□□□ -0.54
LMX1B-203ENST00000526117 SEC11CQ9BY50 192 aa11.66□□□□□ -0.54
LMX1B-203ENST00000526117 MT-ND4LP03901 98 aa11.65□□□□□ -0.54
LMX1B-203ENST00000526117 ADCYAP1P18509 176 aa11.65□□□□□ -0.54
LMX1B-203ENST00000526117 IQCJQ1A5X6 159 aa11.65□□□□□ -0.54
LMX1B-203ENST00000526117 COMMD7Q86VX2 200 aa11.65□□□□□ -0.54
LMX1B-203ENST00000526117 MRAP2Q96G30 205 aa11.65□□□□□ -0.54
LMX1B-203ENST00000526117 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
LMX1B-203ENST00000526117 NTM-AS1Q6ZSK4 140 aa11.64□□□□□ -0.55
LMX1B-203ENST00000526117 ATP5L2Q7Z4Y8 100 aa11.64□□□□□ -0.55
LMX1B-203ENST00000526117 RNF185Q96GF1 192 aa11.64□□□□□ -0.55
LMX1B-203ENST00000526117 TRAV26-2A0A0B4J265 109 aa11.63□□□□□ -0.55
LMX1B-203ENST00000526117 A0A1B0GXF2 115 aa11.63□□□□□ -0.55
LMX1B-203ENST00000526117 S100A8P05109 93 aa11.63□□□□□ -0.55
LMX1B-203ENST00000526117 RAB4AP20338 218 aa11.63□□□□□ -0.55
LMX1B-203ENST00000526117 KCNIP4Q6PIL6 250 aa11.63□□□□□ -0.55
LMX1B-203ENST00000526117 PKD1P98161 4303 aa11.62□□□□□ -0.55
LMX1B-203ENST00000526117 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
LMX1B-203ENST00000526117 F8W036 122 aa11.62□□□□□ -0.55
LMX1B-203ENST00000526117 C10orf91Q5T1B1 145 aa11.62□□□□□ -0.55
LMX1B-203ENST00000526117 URGCP-MRPS24S4R325 110 aa11.62□□□□□ -0.55
LMX1B-203ENST00000526117 IGHV1-24A0A0C4DH33 117 aa11.61□□□□□ -0.55
LMX1B-203ENST00000526117 IGHV3-30P01768 117 aa11.61□□□□□ -0.55
LMX1B-203ENST00000526117 IGHV3-33P01772 117 aa11.61□□□□□ -0.55
LMX1B-203ENST00000526117 IGHV3-30-3P0DP02 117 aa11.61□□□□□ -0.55
LMX1B-203ENST00000526117 IGHV3-30-5P0DP03 117 aa11.61□□□□□ -0.55
LMX1B-203ENST00000526117 HBBP68871 147 aa11.61□□□□□ -0.55
LMX1B-203ENST00000526117 TNP2Q05952 138 aa11.61□□□□□ -0.55
LMX1B-203ENST00000526117 ELOBQ15370 118 aa11.61□□□□□ -0.55
LMX1B-203ENST00000526117 AMN1Q8IY45 258 aa11.61□□□□□ -0.55
LMX1B-203ENST00000526117 A0A087WX48 190 aa11.6□□□□□ -0.55
LMX1B-203ENST00000526117 NCR2O95944 276 aa11.6□□□□□ -0.55
LMX1B-203ENST00000526117 PPP1R17O96001 155 aa11.6□□□□□ -0.55
LMX1B-203ENST00000526117 FAM104BQ5XKR9 115 aa11.6□□□□□ -0.55
LMX1B-203ENST00000526117 RPL39LQ96EH5 51 aaKnown RBP11.6□□□□□ -0.55
LMX1B-203ENST00000526117 IMMP2LQ96T52 175 aa11.6□□□□□ -0.55
LMX1B-203ENST00000526117 TRAV8-3A0A0A6YYJ7 113 aa11.59□□□□□ -0.55
LMX1B-203ENST00000526117 Q8N3U1 123 aa11.59□□□□□ -0.55
LMX1B-203ENST00000526117 CTDSP1Q9GZU7 261 aa11.59□□□□□ -0.55
LMX1B-203ENST00000526117 CARHSP1Q9Y2V2 147 aaKnown RBP11.59□□□□□ -0.55
LMX1B-203ENST00000526117 SDHAF1A6NFY7 115 aa11.58□□□□□ -0.56
LMX1B-203ENST00000526117 COTL1Q14019 142 aa11.58□□□□□ -0.56
LMX1B-203ENST00000526117 CHCHD5Q9BSY4 110 aa11.58□□□□□ -0.56
LMX1B-203ENST00000526117 CAMPP49913 170 aa11.57□□□□□ -0.56
LMX1B-203ENST00000526117 TMEM243Q9BU79 118 aa11.57□□□□□ -0.56
LMX1B-203ENST00000526117 TMEM242Q9NWH2 141 aa11.57□□□□□ -0.56
LMX1B-203ENST00000526117 TRBV27A0A0K0K1C4 114 aa11.56□□□□□ -0.56
LMX1B-203ENST00000526117 A0A1B0GUV1 79 aa11.56□□□□□ -0.56
LMX1B-203ENST00000526117 POLR2KP53803 58 aaKnown RBP11.56□□□□□ -0.56
LMX1B-203ENST00000526117 MRPL51Q4U2R6 128 aaKnown RBP11.56□□□□□ -0.56
LMX1B-203ENST00000526117 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
LMX1B-203ENST00000526117 MRPL54Q6P161 138 aaKnown RBP11.56□□□□□ -0.56
LMX1B-203ENST00000526117 ATRAIDQ6UW56 229 aa11.56□□□□□ -0.56
LMX1B-203ENST00000526117 TMEM70Q9BUB7 260 aa11.56□□□□□ -0.56
LMX1B-203ENST00000526117 ST20Q9HBF5 79 aa11.56□□□□□ -0.56
LMX1B-203ENST00000526117 COX11Q9Y6N1 276 aa11.56□□□□□ -0.56
LMX1B-203ENST00000526117 PKHD1P08F94 4074 aa11.56□□□□□ -0.56
LMX1B-203ENST00000526117 TRBV24-1A0A075B6N3 115 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms