RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 C10orf128Q5T292 105 aa1.96□□□□□ -2.1
USP47-206ENST00000525367 COX7B2Q8TF08 81 aa1.96□□□□□ -2.1
USP47-206ENST00000525367 LINC00208Q96KT6 92 aa1.96□□□□□ -2.1
USP47-206ENST00000525367 CCL19Q99731 98 aa1.96□□□□□ -2.1
USP47-206ENST00000525367 BLMP54132 1417 aaPredicted RBP1.96□□□□□ -2.1
USP47-206ENST00000525367 PLXNA2O75051 1894 aa1.96□□□□□ -2.1
USP47-206ENST00000525367 CASKIN1Q8WXD9 1431 aa1.95□□□□□ -2.1
USP47-206ENST00000525367 KRTDAPP60985 99 aa1.95□□□□□ -2.1
USP47-206ENST00000525367 GNG11P61952 73 aa1.95□□□□□ -2.1
USP47-206ENST00000525367 KLKP1Q107X0 134 aa1.95□□□□□ -2.1
USP47-206ENST00000525367 Q86TA4 180 aa1.95□□□□□ -2.1
USP47-206ENST00000525367 SNHG12Q9BXW3 62 aa1.95□□□□□ -2.1
USP47-206ENST00000525367 Q9H521 79 aa1.95□□□□□ -2.1
USP47-206ENST00000525367 SCAPERQ9BY12 1400 aa1.94□□□□□ -2.1
USP47-206ENST00000525367 TRBV30A0A0K0K1B3 111 aa1.94□□□□□ -2.1
USP47-206ENST00000525367 UBA52P62987 128 aaKnown RBP1.94□□□□□ -2.1
USP47-206ENST00000525367 LINC00575Q6W349 94 aa1.94□□□□□ -2.1
USP47-206ENST00000525367 LAMB1P07942 1786 aa1.94□□□□□ -2.1
USP47-206ENST00000525367 SPAG17Q6Q759 2223 aa1.94□□□□□ -2.1
USP47-206ENST00000525367 SDK1Q7Z5N4 2213 aa1.94□□□□□ -2.1
USP47-206ENST00000525367 MCM3APO60318 1980 aa1.94□□□□□ -2.1
USP47-206ENST00000525367 PPIP5K1Q6PFW1 1433 aa1.93□□□□□ -2.1
USP47-206ENST00000525367 NAP1L6A6NFF2 107 aa1.93□□□□□ -2.1
USP47-206ENST00000525367 SCP2D1Q9UJQ7 156 aa1.93□□□□□ -2.1
USP47-206ENST00000525367 V9GYV3 84 aa1.93□□□□□ -2.1
USP47-206ENST00000525367 COL4A1P02462 1669 aa1.93□□□□□ -2.1
USP47-206ENST00000525367 NSD3Q9BZ95 1437 aa1.92□□□□□ -2.1
USP47-206ENST00000525367 ARHGAP5Q13017 1502 aa1.92□□□□□ -2.1
USP47-206ENST00000525367 A0A1W2PPM0 123 aa1.92□□□□□ -2.1
USP47-206ENST00000525367 ELOF1P60002 83 aaKnown RBP1.92□□□□□ -2.1
USP47-206ENST00000525367 CITO14578 2027 aa1.91□□□□□ -2.1
USP47-206ENST00000525367 MUC22E2RYF6 1773 aaPredicted RBP1.91□□□□□ -2.1
USP47-206ENST00000525367 ZNF142P52746 1687 aaPredicted RBP1.91□□□□□ -2.1
USP47-206ENST00000525367 TEX14Q8IWB6 1497 aa1.91□□□□□ -2.1
USP47-206ENST00000525367 PVALEFA0A1B0GWK0 134 aa1.91□□□□□ -2.1
USP47-206ENST00000525367 GNGT2O14610 69 aa1.91□□□□□ -2.1
USP47-206ENST00000525367 EFNA4P52798 201 aa1.91□□□□□ -2.1
USP47-206ENST00000525367 EDDM3BP56851 147 aa1.91□□□□□ -2.1
USP47-206ENST00000525367 TMEM14BQ9NUH8 114 aa1.91□□□□□ -2.1
USP47-206ENST00000525367 LINC00474Q9P2X8 69 aa1.91□□□□□ -2.1
USP47-206ENST00000525367 PHRF1Q9P1Y6 1649 aaKnown RBP1.91□□□□□ -2.1
USP47-206ENST00000525367 TET1Q8NFU7 2136 aa1.9□□□□□ -2.1
USP47-206ENST00000525367 TRBV7-3A0A075B6L6 115 aa1.9□□□□□ -2.11
USP47-206ENST00000525367 C10orf99Q6UWK7 81 aa1.9□□□□□ -2.11
USP47-206ENST00000525367 VAMP8Q9BV40 100 aa1.9□□□□□ -2.11
USP47-206ENST00000525367 V9GYS6 101 aa1.9□□□□□ -2.11
USP47-206ENST00000525367 DLEC1Q9Y238 1755 aa1.9□□□□□ -2.11
USP47-206ENST00000525367 CLPSL1A2RUU4 121 aa1.89□□□□□ -2.11
USP47-206ENST00000525367 MT-ATP8P03928 68 aa1.89□□□□□ -2.11
USP47-206ENST00000525367 TSLPQ969D9 159 aa1.89□□□□□ -2.11
USP47-206ENST00000525367 MGST2Q99735 147 aa1.89□□□□□ -2.11
USP47-206ENST00000525367 CASP8AP2Q9UKL3 1982 aa1.89□□□□□ -2.11
USP47-206ENST00000525367 SPHKAPQ2M3C7 1700 aa1.88□□□□□ -2.11
USP47-206ENST00000525367 ARAP2Q8WZ64 1704 aa1.88□□□□□ -2.11
USP47-206ENST00000525367 RREB1Q92766 1687 aa1.88□□□□□ -2.11
USP47-206ENST00000525367 ROBO1Q9Y6N7 1651 aa1.88□□□□□ -2.11
USP47-206ENST00000525367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.88□□□□□ -2.11
USP47-206ENST00000525367 PPP1R17O96001 155 aa1.88□□□□□ -2.11
USP47-206ENST00000525367 LYNX1P0DP58 116 aa1.88□□□□□ -2.11
USP47-206ENST00000525367 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
USP47-206ENST00000525367 UQCR10Q9UDW1 63 aa1.88□□□□□ -2.11
USP47-206ENST00000525367 LENEPQ9Y5L5 61 aa1.88□□□□□ -2.11
USP47-206ENST00000525367 ANGP03950 147 aaKnown RBP1.87□□□□□ -2.11
USP47-206ENST00000525367 DYNLRB1Q9NP97 96 aa1.87□□□□□ -2.11
USP47-206ENST00000525367 R4GMQ9 66 aa1.87□□□□□ -2.11
USP47-206ENST00000525367 FYCO1Q9BQS8 1478 aa1.87□□□□□ -2.11
USP47-206ENST00000525367 ZGRF1Q86YA3 2104 aa1.87□□□□□ -2.11
USP47-206ENST00000525367 E9PCH4 1651 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 TTC37Q6PGP7 1564 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 ABCC5O15440 1437 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 hADV29S1A0JD25 119 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 CRYM-AS1A6NIL9 109 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 SEC11AP67812 179 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 PMCHL2Q9BQD1 86 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 MANBALQ9NQG1 85 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 PXDNQ92626 1479 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 NWD2Q9ULI1 1742 aa1.86□□□□□ -2.11
USP47-206ENST00000525367 CACNA1BQ00975 2339 aa1.85□□□□□ -2.11
USP47-206ENST00000525367 KIAA0100Q14667 2235 aaKnown RBP1.85□□□□□ -2.11
USP47-206ENST00000525367 LOC285095A0A1B0GVY8 99 aa1.85□□□□□ -2.11
USP47-206ENST00000525367 SPAG11BQ08648 103 aa1.85□□□□□ -2.11
USP47-206ENST00000525367 SPINK13Q1W4C9 94 aa1.85□□□□□ -2.11
USP47-206ENST00000525367 SPAG11AQ6PDA7 123 aa1.85□□□□□ -2.11
USP47-206ENST00000525367 FAM213BQ8TBF2 198 aa1.85□□□□□ -2.11
USP47-206ENST00000525367 GAPVD1Q14C86 1478 aa1.85□□□□□ -2.11
USP47-206ENST00000525367 PEAK1Q9H792 1746 aa1.85□□□□□ -2.11
USP47-206ENST00000525367 TNS1Q9HBL0 1735 aaKnown RBP1.85□□□□□ -2.11
USP47-206ENST00000525367 TROQ12816 1431 aaPredicted RBP1.84□□□□□ -2.11
USP47-206ENST00000525367 TRIOBPQ9H2D6 2365 aa1.84□□□□□ -2.11
USP47-206ENST00000525367 FBN1P35555 2871 aaKnown RBP1.84□□□□□ -2.11
USP47-206ENST00000525367 NRXN2Q9P2S2 1712 aa1.84□□□□□ -2.11
USP47-206ENST00000525367 A0A087WTM6 91 aa1.84□□□□□ -2.11
USP47-206ENST00000525367 CHKB-CPT1BH3BT56 60 aa1.84□□□□□ -2.11
USP47-206ENST00000525367 Q0VG73 95 aa1.84□□□□□ -2.11
USP47-206ENST00000525367 KRTAP21-3Q3LHN1 58 aa1.84□□□□□ -2.11
USP47-206ENST00000525367 Q6ZSA8 131 aa1.84□□□□□ -2.11
USP47-206ENST00000525367 FAM167A-AS1Q96KT0 104 aa1.84□□□□□ -2.11
USP47-206ENST00000525367 LRRC37A3O60309 1634 aa1.84□□□□□ -2.12
USP47-206ENST00000525367 GOLGA3Q08378 1498 aa1.83□□□□□ -2.12
USP47-206ENST00000525367 ATOX1O00244 68 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms