RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 F5H697 171 aa10.29□□□□□ -0.76
SF3B2-202ENST00000524475 M0QY20 66 aa10.29□□□□□ -0.76
SF3B2-202ENST00000524475 PNRC1Q12796 327 aaPredicted RBP10.29□□□□□ -0.76
SF3B2-202ENST00000524475 WFDC10BQ8IUB3 73 aa10.29□□□□□ -0.76
SF3B2-202ENST00000524475 FRZBQ92765 325 aa10.29□□□□□ -0.76
SF3B2-202ENST00000524475 DNAJC30Q96LL9 226 aa10.29□□□□□ -0.76
SF3B2-202ENST00000524475 IGHV3-38A0A0C4DH36 116 aa10.28□□□□□ -0.76
SF3B2-202ENST00000524475 A0A1B0GUT8 65 aa10.28□□□□□ -0.76
SF3B2-202ENST00000524475 LINC01556Q5JQF7 62 aa10.28□□□□□ -0.76
SF3B2-202ENST00000524475 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
SF3B2-202ENST00000524475 SMIM15Q7Z3B0 74 aa10.28□□□□□ -0.76
SF3B2-202ENST00000524475 C10orf126Q8N4M7 172 aa10.28□□□□□ -0.76
SF3B2-202ENST00000524475 BORCS7Q96B45 105 aa10.28□□□□□ -0.76
SF3B2-202ENST00000524475 PGLYRP4Q96LB8 373 aa10.28□□□□□ -0.76
SF3B2-202ENST00000524475 DNAH11Q96DT5 4516 aa10.27□□□□□ -0.77
SF3B2-202ENST00000524475 SMIM27A0A1W2PRY6 76 aa10.27□□□□□ -0.77
SF3B2-202ENST00000524475 MGPP08493 103 aa10.27□□□□□ -0.77
SF3B2-202ENST00000524475 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
SF3B2-202ENST00000524475 NAT8BQ9UHF3 227 aa10.27□□□□□ -0.77
SF3B2-202ENST00000524475 BIRC6Q9NR09 4857 aa10.27□□□□□ -0.77
SF3B2-202ENST00000524475 PKHD1P08F94 4074 aa10.26□□□□□ -0.77
SF3B2-202ENST00000524475 TMEM97Q5BJF2 176 aa10.26□□□□□ -0.77
SF3B2-202ENST00000524475 RASL11AQ6T310 242 aa10.26□□□□□ -0.77
SF3B2-202ENST00000524475 DAZ4Q86SG3 579 aaKnown RBP10.26□□□□□ -0.77
SF3B2-202ENST00000524475 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.26□□□□□ -0.77
SF3B2-202ENST00000524475 NUP35Q8NFH5 326 aa10.26□□□□□ -0.77
SF3B2-202ENST00000524475 DAZ3Q9NR90 486 aaKnown RBP10.26□□□□□ -0.77
SF3B2-202ENST00000524475 PPP1R2P9O14990 202 aa10.25□□□□□ -0.77
SF3B2-202ENST00000524475 TMEM191AQ9H0A3 160 aa10.25□□□□□ -0.77
SF3B2-202ENST00000524475 RIGQ13278 110 aa10.24□□□□□ -0.77
SF3B2-202ENST00000524475 CHCHD7Q9BUK0 85 aa10.24□□□□□ -0.77
SF3B2-202ENST00000524475 NIT2Q9NQR4 276 aa10.24□□□□□ -0.77
SF3B2-202ENST00000524475 TNFRSF18Q9Y5U5 241 aa10.24□□□□□ -0.77
SF3B2-202ENST00000524475 A0A1B0GW15 77 aa10.23□□□□□ -0.77
SF3B2-202ENST00000524475 LINC00862A6NCI5 91 aa10.23□□□□□ -0.77
SF3B2-202ENST00000524475 PRSS29PA6NIE9 313 aa10.23□□□□□ -0.77
SF3B2-202ENST00000524475 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
SF3B2-202ENST00000524475 TRBV6-8A0A0A6YYG3 113 aa10.22□□□□□ -0.77
SF3B2-202ENST00000524475 A0A1B0GVY2 172 aa10.22□□□□□ -0.77
SF3B2-202ENST00000524475 TMEM218A2RU14 115 aa10.22□□□□□ -0.77
SF3B2-202ENST00000524475 LAGE3Q14657 143 aa10.22□□□□□ -0.77
SF3B2-202ENST00000524475 Q6ZRN7 208 aaPredicted RBP10.22□□□□□ -0.77
SF3B2-202ENST00000524475 GATD1Q8NB37 220 aa10.22□□□□□ -0.77
SF3B2-202ENST00000524475 ANAPC16Q96DE5 110 aa10.22□□□□□ -0.77
SF3B2-202ENST00000524475 IBA57-AS1B1ANH7 110 aa10.21□□□□□ -0.77
SF3B2-202ENST00000524475 PKIAP61925 76 aa10.21□□□□□ -0.77
SF3B2-202ENST00000524475 NIT1Q86X76 327 aa10.21□□□□□ -0.77
SF3B2-202ENST00000524475 MT-ND4LP03901 98 aa10.2□□□□□ -0.78
SF3B2-202ENST00000524475 ADCYAP1P18509 176 aa10.2□□□□□ -0.78
SF3B2-202ENST00000524475 DYNC1H1Q14204 4646 aaKnown RBP10.2□□□□□ -0.78
SF3B2-202ENST00000524475 COMMD7Q86VX2 200 aa10.2□□□□□ -0.78
SF3B2-202ENST00000524475 SEC11CQ9BY50 192 aa10.2□□□□□ -0.78
SF3B2-202ENST00000524475 IQCJQ1A5X6 159 aa10.19□□□□□ -0.78
SF3B2-202ENST00000524475 KCNIP4Q6PIL6 250 aa10.19□□□□□ -0.78
SF3B2-202ENST00000524475 NTM-AS1Q6ZSK4 140 aa10.19□□□□□ -0.78
SF3B2-202ENST00000524475 ATP5L2Q7Z4Y8 100 aa10.19□□□□□ -0.78
SF3B2-202ENST00000524475 MRAP2Q96G30 205 aa10.19□□□□□ -0.78
SF3B2-202ENST00000524475 RNF185Q96GF1 192 aa10.19□□□□□ -0.78
SF3B2-202ENST00000524475 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
SF3B2-202ENST00000524475 TRBV6-5A0A0K0K1A5 114 aa10.18□□□□□ -0.78
SF3B2-202ENST00000524475 A0A1B0GXF2 115 aa10.18□□□□□ -0.78
SF3B2-202ENST00000524475 F8W036 122 aa10.18□□□□□ -0.78
SF3B2-202ENST00000524475 S100A8P05109 93 aa10.18□□□□□ -0.78
SF3B2-202ENST00000524475 RAB4AP20338 218 aa10.18□□□□□ -0.78
SF3B2-202ENST00000524475 URGCP-MRPS24S4R325 110 aa10.18□□□□□ -0.78
SF3B2-202ENST00000524475 TRBV25-1A0A075B6N4 114 aa10.17□□□□□ -0.78
SF3B2-202ENST00000524475 IGHV3-30P01768 117 aa10.17□□□□□ -0.78
SF3B2-202ENST00000524475 IGHV3-33P01772 117 aa10.17□□□□□ -0.78
SF3B2-202ENST00000524475 IGHV3-30-3P0DP02 117 aa10.17□□□□□ -0.78
SF3B2-202ENST00000524475 IGHV3-30-5P0DP03 117 aa10.17□□□□□ -0.78
SF3B2-202ENST00000524475 HBBP68871 147 aa10.17□□□□□ -0.78
SF3B2-202ENST00000524475 TNP2Q05952 138 aa10.17□□□□□ -0.78
SF3B2-202ENST00000524475 A0A087WX48 190 aa10.16□□□□□ -0.78
SF3B2-202ENST00000524475 IGHV1-24A0A0C4DH33 117 aa10.16□□□□□ -0.78
SF3B2-202ENST00000524475 PPP1R17O96001 155 aa10.16□□□□□ -0.78
SF3B2-202ENST00000524475 ELOBQ15370 118 aa10.16□□□□□ -0.78
SF3B2-202ENST00000524475 C10orf91Q5T1B1 145 aa10.16□□□□□ -0.78
SF3B2-202ENST00000524475 FAM104BQ5XKR9 115 aa10.16□□□□□ -0.78
SF3B2-202ENST00000524475 AMN1Q8IY45 258 aa10.16□□□□□ -0.78
SF3B2-202ENST00000524475 DNAH5Q8TE73 4624 aa10.16□□□□□ -0.78
SF3B2-202ENST00000524475 TRAV8-3A0A0A6YYJ7 113 aa10.15□□□□□ -0.78
SF3B2-202ENST00000524475 NCR2O95944 276 aa10.15□□□□□ -0.78
SF3B2-202ENST00000524475 Q8N3U1 123 aa10.15□□□□□ -0.78
SF3B2-202ENST00000524475 RPL39LQ96EH5 51 aaKnown RBP10.15□□□□□ -0.78
SF3B2-202ENST00000524475 IMMP2LQ96T52 175 aa10.15□□□□□ -0.78
SF3B2-202ENST00000524475 CTDSP1Q9GZU7 261 aa10.15□□□□□ -0.78
SF3B2-202ENST00000524475 SDHAF1A6NFY7 115 aa10.14□□□□□ -0.79
SF3B2-202ENST00000524475 COTL1Q14019 142 aa10.14□□□□□ -0.79
SF3B2-202ENST00000524475 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
SF3B2-202ENST00000524475 CARHSP1Q9Y2V2 147 aaKnown RBP10.14□□□□□ -0.79
SF3B2-202ENST00000524475 CAMPP49913 170 aa10.13□□□□□ -0.79
SF3B2-202ENST00000524475 MRPL54Q6P161 138 aaKnown RBP10.13□□□□□ -0.79
SF3B2-202ENST00000524475 TMEM243Q9BU79 118 aa10.13□□□□□ -0.79
SF3B2-202ENST00000524475 TRBV27A0A0K0K1C4 114 aa10.12□□□□□ -0.79
SF3B2-202ENST00000524475 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
SF3B2-202ENST00000524475 MRPL51Q4U2R6 128 aaKnown RBP10.12□□□□□ -0.79
SF3B2-202ENST00000524475 MPV17L2Q567V2 206 aa10.12□□□□□ -0.79
SF3B2-202ENST00000524475 NRACQ8N912 160 aa10.12□□□□□ -0.79
SF3B2-202ENST00000524475 TMEM70Q9BUB7 260 aa10.12□□□□□ -0.79
SF3B2-202ENST00000524475 TM2D2Q9BX73 214 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms