RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 SPANXN1Q5VSR9 72 aa12.2□□□□□ -0.46
PTP4A3-206ENST00000524028 TMUB2Q71RG4 321 aa12.2□□□□□ -0.46
PTP4A3-206ENST00000524028 F5H697 171 aa12.19□□□□□ -0.46
PTP4A3-206ENST00000524028 PFDN1O60925 122 aa12.19□□□□□ -0.46
PTP4A3-206ENST00000524028 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
PTP4A3-206ENST00000524028 LRP1Q07954 4544 aaKnown RBP12.18□□□□□ -0.46
PTP4A3-206ENST00000524028 CRPP02741 224 aa12.18□□□□□ -0.46
PTP4A3-206ENST00000524028 H2AFB1P0C5Y9 115 aa12.18□□□□□ -0.46
PTP4A3-206ENST00000524028 VAX2Q9UIW0 290 aa12.18□□□□□ -0.46
PTP4A3-206ENST00000524028 HMSDA8MTL9 139 aa12.17□□□□□ -0.46
PTP4A3-206ENST00000524028 USP17L23D6RBM5 183 aa12.17□□□□□ -0.46
PTP4A3-206ENST00000524028 BCL2L11O43521 198 aa12.17□□□□□ -0.46
PTP4A3-206ENST00000524028 RPL35P42766 123 aaKnown RBP12.17□□□□□ -0.46
PTP4A3-206ENST00000524028 CCL20P78556 96 aa12.17□□□□□ -0.46
PTP4A3-206ENST00000524028 C14orf177Q52M58 125 aa12.17□□□□□ -0.46
PTP4A3-206ENST00000524028 DERL1Q9BUN8 251 aa12.17□□□□□ -0.46
PTP4A3-206ENST00000524028 A0A0D9SG52 128 aa12.16□□□□□ -0.46
PTP4A3-206ENST00000524028 HLA-DQA1P01909 254 aa12.16□□□□□ -0.46
PTP4A3-206ENST00000524028 PRSS1P07477 247 aa12.16□□□□□ -0.46
PTP4A3-206ENST00000524028 KRTAP26-1Q6PEX3 210 aa12.16□□□□□ -0.46
PTP4A3-206ENST00000524028 PRR34Q9NV39 138 aa12.16□□□□□ -0.46
PTP4A3-206ENST00000524028 KANTRA0A1W2PQU2 76 aa12.15□□□□□ -0.46
PTP4A3-206ENST00000524028 GZMBP10144 247 aa12.15□□□□□ -0.46
PTP4A3-206ENST00000524028 RBX1P62877 108 aa12.15□□□□□ -0.46
PTP4A3-206ENST00000524028 GAGE6Q13070 117 aa12.15□□□□□ -0.46
PTP4A3-206ENST00000524028 MIAQ16674 131 aa12.15□□□□□ -0.46
PTP4A3-206ENST00000524028 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.15□□□□□ -0.46
PTP4A3-206ENST00000524028 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
PTP4A3-206ENST00000524028 CLPSL2Q6UWE3 100 aa12.14□□□□□ -0.47
PTP4A3-206ENST00000524028 C11orf52Q96A22 123 aa12.14□□□□□ -0.47
PTP4A3-206ENST00000524028 AP1S3Q96PC3 154 aa12.14□□□□□ -0.47
PTP4A3-206ENST00000524028 IGLC6P0CF74 106 aa12.13□□□□□ -0.47
PTP4A3-206ENST00000524028 SMIM17P0DL12 118 aa12.13□□□□□ -0.47
PTP4A3-206ENST00000524028 PKIAP61925 76 aa12.13□□□□□ -0.47
PTP4A3-206ENST00000524028 TMEM97Q5BJF2 176 aa12.13□□□□□ -0.47
PTP4A3-206ENST00000524028 LINC00269Q8N2A0 174 aa12.13□□□□□ -0.47
PTP4A3-206ENST00000524028 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
PTP4A3-206ENST00000524028 M0QY20 66 aa12.12□□□□□ -0.47
PTP4A3-206ENST00000524028 TRBV25-1A0A075B6N4 114 aa12.11□□□□□ -0.47
PTP4A3-206ENST00000524028 MGPP08493 103 aa12.11□□□□□ -0.47
PTP4A3-206ENST00000524028 IQCJQ1A5X6 159 aa12.11□□□□□ -0.47
PTP4A3-206ENST00000524028 CENPWQ5EE01 88 aa12.11□□□□□ -0.47
PTP4A3-206ENST00000524028 TPPP3Q9BW30 176 aa12.11□□□□□ -0.47
PTP4A3-206ENST00000524028 MANBALQ9NQG1 85 aa12.11□□□□□ -0.47
PTP4A3-206ENST00000524028 RAB19A4D1S5 217 aa12.1□□□□□ -0.47
PTP4A3-206ENST00000524028 C19orf71A6NCJ1 209 aa12.1□□□□□ -0.47
PTP4A3-206ENST00000524028 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
PTP4A3-206ENST00000524028 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
PTP4A3-206ENST00000524028 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
PTP4A3-206ENST00000524028 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
PTP4A3-206ENST00000524028 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
PTP4A3-206ENST00000524028 FAT3Q8TDW7 4589 aa12.1□□□□□ -0.47
PTP4A3-206ENST00000524028 TRAV1-1A0A0B4J248 108 aa12.09□□□□□ -0.47
PTP4A3-206ENST00000524028 IGHV1-24A0A0C4DH33 117 aa12.09□□□□□ -0.47
PTP4A3-206ENST00000524028 PANO1I0J062 215 aa12.09□□□□□ -0.47
PTP4A3-206ENST00000524028 EIF5AP63241 154 aaKnown RBP12.09□□□□□ -0.47
PTP4A3-206ENST00000524028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.09□□□□□ -0.47
PTP4A3-206ENST00000524028 OXTP01178 125 aa12.08□□□□□ -0.48
PTP4A3-206ENST00000524028 C20orf203Q8NBC4 194 aa12.08□□□□□ -0.48
PTP4A3-206ENST00000524028 HMCN2Q8NDA2 5059 aa12.08□□□□□ -0.48
PTP4A3-206ENST00000524028 IGLV10-54A0A075B6I4 117 aa12.07□□□□□ -0.48
PTP4A3-206ENST00000524028 HNRNPA3P51991 378 aaKnown RBP12.07□□□□□ -0.48
PTP4A3-206ENST00000524028 NKX2-5P52952 324 aaPredicted RBP12.07□□□□□ -0.48
PTP4A3-206ENST00000524028 RPS20P60866 119 aaKnown RBP12.07□□□□□ -0.48
PTP4A3-206ENST00000524028 RPL37AP61513 92 aaKnown RBP12.07□□□□□ -0.48
PTP4A3-206ENST00000524028 REG3AQ06141 175 aa12.07□□□□□ -0.48
PTP4A3-206ENST00000524028 SDIM1Q6ZPB5 146 aa12.07□□□□□ -0.48
PTP4A3-206ENST00000524028 DAZAP1Q96EP5 407 aaKnown RBP12.07□□□□□ -0.48
PTP4A3-206ENST00000524028 TRBV20OR9-2A0A075B6H5 130 aa12.06□□□□□ -0.48
PTP4A3-206ENST00000524028 IGLV4-60A0A075B6I1 120 aa12.06□□□□□ -0.48
PTP4A3-206ENST00000524028 CACNG7P62955 275 aa12.06□□□□□ -0.48
PTP4A3-206ENST00000524028 GFRA4Q9GZZ7 299 aa12.06□□□□□ -0.48
PTP4A3-206ENST00000524028 H7C1H1 209 aa12.05□□□□□ -0.48
PTP4A3-206ENST00000524028 GNG4P50150 75 aa12.05□□□□□ -0.48
PTP4A3-206ENST00000524028 RASL11AQ6T310 242 aa12.05□□□□□ -0.48
PTP4A3-206ENST00000524028 LYZL1Q6UWQ5 148 aa12.05□□□□□ -0.48
PTP4A3-206ENST00000524028 SMIM12Q96EX1 92 aa12.04□□□□□ -0.48
PTP4A3-206ENST00000524028 A0A1B0GUV1 79 aa12.03□□□□□ -0.48
PTP4A3-206ENST00000524028 F2Z2F3 143 aa12.03□□□□□ -0.48
PTP4A3-206ENST00000524028 P01737 135 aa12.03□□□□□ -0.48
PTP4A3-206ENST00000524028 NTF3P20783 257 aa12.03□□□□□ -0.48
PTP4A3-206ENST00000524028 RAB5CP51148 216 aa12.03□□□□□ -0.48
PTP4A3-206ENST00000524028 MEF2BQ02080 365 aaPredicted RBP12.03□□□□□ -0.48
PTP4A3-206ENST00000524028 SERTAD4-AS1Q5TG53 156 aa12.03□□□□□ -0.48
PTP4A3-206ENST00000524028 CLRN3Q8NCR9 226 aa12.03□□□□□ -0.48
PTP4A3-206ENST00000524028 TMEM243Q9BU79 118 aa12.03□□□□□ -0.48
PTP4A3-206ENST00000524028 PKHD1L1Q86WI1 4243 aa12.02□□□□□ -0.48
PTP4A3-206ENST00000524028 SULT1A2P50226 295 aa12.02□□□□□ -0.49
PTP4A3-206ENST00000524028 NIT2Q9NQR4 276 aa12.02□□□□□ -0.49
PTP4A3-206ENST00000524028 MED9Q9NWA0 146 aa12.02□□□□□ -0.49
PTP4A3-206ENST00000524028 TRAV8-4A0A0B4J246 113 aa12.01□□□□□ -0.49
PTP4A3-206ENST00000524028 PDE6DO43924 150 aa12.01□□□□□ -0.49
PTP4A3-206ENST00000524028 IFNA1P01562 189 aa12.01□□□□□ -0.49
PTP4A3-206ENST00000524028 SLPIP03973 132 aa12.01□□□□□ -0.49
PTP4A3-206ENST00000524028 CNBPP62633 177 aaKnown RBP12.01□□□□□ -0.49
PTP4A3-206ENST00000524028 C9orf62Q8N4C0 152 aa12.01□□□□□ -0.49
PTP4A3-206ENST00000524028 PGLYRP4Q96LB8 373 aa12.01□□□□□ -0.49
PTP4A3-206ENST00000524028 DPH3P1Q9H4G8 78 aa12.01□□□□□ -0.49
PTP4A3-206ENST00000524028 hDV102S1A0JD36 115 aa12□□□□□ -0.49
PTP4A3-206ENST00000524028 XKRY2A2RUG3 117 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms