RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PFDN5Q99471 154 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 TRGV9Q99603 122 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 TMEM208Q9BTX3 173 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 SEC11CQ9BY50 192 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 MRPL32Q9BYC8 188 aaKnown RBP1.76□□□□□ -2.13
SKP1-212ENST00000523966 REG4Q9BYZ8 158 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 NKX6-2Q9C056 277 aaPredicted RBP1.76□□□□□ -2.13
SKP1-212ENST00000523966 EIF5A2Q9GZV4 153 aaKnown RBP1.76□□□□□ -2.13
SKP1-212ENST00000523966 GTSF1LQ9H1H1 148 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 SLC35B3Q9H1N7 401 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 SH3BGRL3Q9H299 93 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 MANBALQ9NQG1 85 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 RPRMQ9NS64 109 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 PRELID1Q9Y255 219 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 ARL2-SNX15V9GYD0 113 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 FLNBO75369 2602 aaKnown RBP1.76□□□□□ -2.13
SKP1-212ENST00000523966 DCHS2Q6V1P9 2916 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 SMG1Q96Q15 3661 aaKnown RBP1.76□□□□□ -2.13
SKP1-212ENST00000523966 UBR5O95071 2799 aaPredicted RBP1.76□□□□□ -2.13
SKP1-212ENST00000523966 ABCA2Q9BZC7 2435 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 FN1P02751 2386 aaKnown RBP1.75□□□□□ -2.13
SKP1-212ENST00000523966 TRBV7-1A0A0A6YYK4 115 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 TCRBV4S1A1TA0A5B7 111 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 MAP1LC3B2A6NCE7 125 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 F6UZH7 168 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 F8W036 122 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 H3BUA1 57 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 PDE6DO43924 150 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 HYPMO75409 117 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 APOC3P02656 99 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 CRYGDP07320 174 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 RD3LP0DJH9 198 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 C8orf88P0DMB2 117 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 BCL2P10415 239 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 ORM2P19652 201 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 OR10J1P30954 320 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 FUSP35637 526 aaKnown RBP eCLIP1.75□□□□□ -2.13
SKP1-212ENST00000523966 YPEL3P61236 119 aaPredicted RBP1.75□□□□□ -2.13
SKP1-212ENST00000523966 DEFA6Q01524 100 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 PRB3Q04118 309 aaPredicted RBP1.75□□□□□ -2.13
SKP1-212ENST00000523966 KLRD1Q13241 179 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 GUK1Q16774 197 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 KLK9Q2XQG4 91 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 C10orf55Q5SWW7 151 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 MIC13Q5XKP0 118 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 LCN15Q6UWW0 184 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 SCGB1D4Q6XE38 83 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 CYP2G1PQ6ZSU1 146 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 RPP25LQ8N5L8 163 aaKnown RBP1.75□□□□□ -2.13
SKP1-212ENST00000523966 TTC9CQ8N5M4 171 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 C5orf56Q8N8D9 126 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 SGMS2Q8NHU3 365 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 ACY3Q96HD9 319 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 USMG5Q96IX5 58 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 MGST2Q99735 147 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 TCEAL7Q9BRU2 100 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 MAP1LC3BQ9GZQ8 125 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 TMEM167BQ9NRX6 74 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 GNG13Q9P2W3 67 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 LINC00527Q9UJ94 153 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 KLK9Q9UKQ9 250 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 PXMP4Q9Y6I8 212 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 KMT2BQ9UMN6 2715 aaPredicted RBP1.75□□□□□ -2.13
SKP1-212ENST00000523966 ITPR3Q14573 2671 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 CRYBG3Q68DQ2 2970 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 UNC79Q9P2D8 2635 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 TACC2O95359 2948 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 SORL1Q92673 2214 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 HRNRQ86YZ3 2850 aaPredicted RBP1.75□□□□□ -2.13
SKP1-212ENST00000523966 ITPR2Q14571 2701 aa1.75□□□□□ -2.13
SKP1-212ENST00000523966 SETD2Q9BYW2 2564 aaPredicted RBP1.74□□□□□ -2.13
SKP1-212ENST00000523966 SPENQ96T58 3664 aaKnown RBP1.74□□□□□ -2.13
SKP1-212ENST00000523966 UTP20O75691 2785 aaKnown RBP1.74□□□□□ -2.13
SKP1-212ENST00000523966 A0A096LNT2 108 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 A0A1W2PRE2 83 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 FAM223BA6NKX1 122 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 E7EUB6 86 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 H3BUX3 64 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 I3L2K1 104 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 K7EIM0 57 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 GNG7O60262 68 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 REG1AP05451 166 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 OR5G3P0C626 314 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 SFTA3P0C7M3 94 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 IGLC1P0CG04 106 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 ARL14EPLP0DKL9 152 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 CD24P25063 80 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 GCHFRP30047 84 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 DEFA5Q01523 94 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 RHEBQ15382 184 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 FAM78BQ5VT40 261 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 C10orf113Q5VZT2 155 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 UNQ5815/PRO19632Q6UWF5 114 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 FAM223AQ8IWN6 122 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 BOD1L2Q8IYS8 172 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 DYNAPQ8N1N2 210 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 TMEM86BQ8N661 226 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 Q8WTZ3 238 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 BTF3L4Q96K17 158 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 LINC00052Q96N35 136 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms