RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 Q86TA4 180 aa7.25□□□□□ -1.25
SDCBP-211ENST00000523441 PPP1R1CQ8WVI7 109 aa7.25□□□□□ -1.25
SDCBP-211ENST00000523441 RAB24Q969Q5 203 aa7.25□□□□□ -1.25
SDCBP-211ENST00000523441 KRTAP9-6A0A140TA67 174 aa7.24□□□□□ -1.25
SDCBP-211ENST00000523441 H7C1H1 209 aa7.24□□□□□ -1.25
SDCBP-211ENST00000523441 STAG3L2P0CL84 134 aa7.24□□□□□ -1.25
SDCBP-211ENST00000523441 STAG3L3P0CL85 134 aa7.24□□□□□ -1.25
SDCBP-211ENST00000523441 RAB4BP61018 213 aa7.24□□□□□ -1.25
SDCBP-211ENST00000523441 OR10G8Q8NGN5 311 aa7.24□□□□□ -1.25
SDCBP-211ENST00000523441 NDUFS6O75380 124 aaKnown RBP7.23□□□□□ -1.25
SDCBP-211ENST00000523441 GFRA4Q9GZZ7 299 aa7.23□□□□□ -1.25
SDCBP-211ENST00000523441 MUC2Q02817 5179 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 IGLV4-60A0A075B6I1 120 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 A0A096LNI7 61 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 TRBV6-1A0A0K0K1D8 114 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 PEX7O00628 323 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 RPS10P46783 165 aaKnown RBP7.22□□□□□ -1.25
SDCBP-211ENST00000523441 SULT1A2P50226 295 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 FAM162BQ5T6X4 162 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 C20orf203Q8NBC4 194 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 OR10AG1Q8NH19 301 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 TMEM167BQ9NRX6 74 aa7.22□□□□□ -1.25
SDCBP-211ENST00000523441 IGHV1-24A0A0C4DH33 117 aa7.21□□□□□ -1.26
SDCBP-211ENST00000523441 A6NHS1 94 aa7.21□□□□□ -1.26
SDCBP-211ENST00000523441 MPC2O95563 127 aa7.21□□□□□ -1.26
SDCBP-211ENST00000523441 CXorf1O96002 111 aa7.21□□□□□ -1.26
SDCBP-211ENST00000523441 H2BFSP57053 126 aa7.21□□□□□ -1.26
SDCBP-211ENST00000523441 CYCSP99999 105 aaKnown RBP7.21□□□□□ -1.26
SDCBP-211ENST00000523441 DNLZQ5SXM8 178 aa7.21□□□□□ -1.26
SDCBP-211ENST00000523441 C15orf56Q8N910 161 aa7.21□□□□□ -1.26
SDCBP-211ENST00000523441 RBM38Q9H0Z9 239 aaKnown RBP7.21□□□□□ -1.26
SDCBP-211ENST00000523441 TRAV8-4A0A0B4J246 113 aa7.2□□□□□ -1.26
SDCBP-211ENST00000523441 P01737 135 aa7.2□□□□□ -1.26
SDCBP-211ENST00000523441 MGPP08493 103 aa7.2□□□□□ -1.26
SDCBP-211ENST00000523441 UBE2G1P62253 170 aa7.2□□□□□ -1.26
SDCBP-211ENST00000523441 TMEM97Q5BJF2 176 aa7.2□□□□□ -1.26
SDCBP-211ENST00000523441 FAM231BA6NCW3 169 aa7.19□□□□□ -1.26
SDCBP-211ENST00000523441 PET100P0DJ07 73 aa7.19□□□□□ -1.26
SDCBP-211ENST00000523441 SPANXN1Q5VSR9 72 aa7.19□□□□□ -1.26
SDCBP-211ENST00000523441 PRR27Q6MZM9 219 aa7.19□□□□□ -1.26
SDCBP-211ENST00000523441 MZT2BQ6NZ67 158 aa7.19□□□□□ -1.26
SDCBP-211ENST00000523441 Q6ZRP5 223 aa7.19□□□□□ -1.26
SDCBP-211ENST00000523441 INO80EQ8NBZ0 244 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-211ENST00000523441 ENKURQ8TC29 256 aa7.19□□□□□ -1.26
SDCBP-211ENST00000523441 SUN5Q8TC36 379 aa7.19□□□□□ -1.26
SDCBP-211ENST00000523441 LINC00526Q96FQ7 95 aa7.19□□□□□ -1.26
SDCBP-211ENST00000523441 ZNF471Q9BX82 626 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-211ENST00000523441 ACTR3CQ9C0K3 210 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-211ENST00000523441 UBE2L6O14933 153 aa7.18□□□□□ -1.26
SDCBP-211ENST00000523441 SSNA1O43805 119 aa7.18□□□□□ -1.26
SDCBP-211ENST00000523441 SMIM17P0DL12 118 aa7.18□□□□□ -1.26
SDCBP-211ENST00000523441 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
SDCBP-211ENST00000523441 PRR4Q16378 134 aa7.18□□□□□ -1.26
SDCBP-211ENST00000523441 AQP10Q96PS8 301 aa7.18□□□□□ -1.26
SDCBP-211ENST00000523441 TMEM243Q9BU79 118 aa7.18□□□□□ -1.26
SDCBP-211ENST00000523441 A0A0U1RQV1 116 aa7.17□□□□□ -1.26
SDCBP-211ENST00000523441 A0A1W2PRE2 83 aa7.17□□□□□ -1.26
SDCBP-211ENST00000523441 ATP6V0CP27449 155 aa7.17□□□□□ -1.26
SDCBP-211ENST00000523441 IQCJQ1A5X6 159 aa7.17□□□□□ -1.26
SDCBP-211ENST00000523441 CFAP161Q6P656 301 aa7.17□□□□□ -1.26
SDCBP-211ENST00000523441 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
SDCBP-211ENST00000523441 VAX2Q9UIW0 290 aa7.17□□□□□ -1.26
SDCBP-211ENST00000523441 TRAV26-2A0A0B4J265 109 aa7.16□□□□□ -1.26
SDCBP-211ENST00000523441 NKX2-5P52952 324 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-211ENST00000523441 CACNG7P62955 275 aa7.16□□□□□ -1.26
SDCBP-211ENST00000523441 ZNF674Q2M3X9 581 aa7.16□□□□□ -1.26
SDCBP-211ENST00000523441 GZMBP10144 247 aa7.15□□□□□ -1.26
SDCBP-211ENST00000523441 FMC1Q96HJ9 113 aa7.15□□□□□ -1.26
SDCBP-211ENST00000523441 TPPP3Q9BW30 176 aa7.15□□□□□ -1.26
SDCBP-211ENST00000523441 ZFP30Q9Y2G7 519 aa7.15□□□□□ -1.26
SDCBP-211ENST00000523441 FAM74A7A6NL05 159 aa7.14□□□□□ -1.27
SDCBP-211ENST00000523441 INMT-MINDY4F8WBC2 141 aa7.14□□□□□ -1.27
SDCBP-211ENST00000523441 MBP02144 154 aa7.14□□□□□ -1.27
SDCBP-211ENST00000523441 DEFA1P59665 94 aa7.14□□□□□ -1.27
SDCBP-211ENST00000523441 CHCHD10Q8WYQ3 142 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-211ENST00000523441 HIST1H2BAQ96A08 127 aa7.14□□□□□ -1.27
SDCBP-211ENST00000523441 MT-ND6P03923 174 aa7.13□□□□□ -1.27
SDCBP-211ENST00000523441 AKR1C3P42330 323 aa7.13□□□□□ -1.27
SDCBP-211ENST00000523441 AMTP48728 403 aa7.13□□□□□ -1.27
SDCBP-211ENST00000523441 GAGE2BQ13066 116 aa7.13□□□□□ -1.27
SDCBP-211ENST00000523441 ZNF726P1Q15940 193 aa7.13□□□□□ -1.27
SDCBP-211ENST00000523441 CST9LP1Q5W188 147 aa7.13□□□□□ -1.27
SDCBP-211ENST00000523441 AP1S3Q96PC3 154 aa7.13□□□□□ -1.27
SDCBP-211ENST00000523441 PSMG3Q9BT73 122 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-211ENST00000523441 CCDC32Q9BV29 185 aa7.13□□□□□ -1.27
SDCBP-211ENST00000523441 A0A1B0GUV1 79 aa7.12□□□□□ -1.27
SDCBP-211ENST00000523441 C1orf137Q5JT78 98 aa7.12□□□□□ -1.27
SDCBP-211ENST00000523441 SUMO4Q6EEV6 95 aa7.12□□□□□ -1.27
SDCBP-211ENST00000523441 ZNF664Q8N3J9 261 aa7.12□□□□□ -1.27
SDCBP-211ENST00000523441 STOML3Q8TAV4 291 aa7.12□□□□□ -1.27
SDCBP-211ENST00000523441 FAT4Q6V0I7 4981 aa7.11□□□□□ -1.27
SDCBP-211ENST00000523441 GVQW2A0A096LPI5 108 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-211ENST00000523441 M0QY20 66 aa7.11□□□□□ -1.27
SDCBP-211ENST00000523441 LTAP01374 205 aa7.11□□□□□ -1.27
SDCBP-211ENST00000523441 AMMECR1LQ6DCA0 310 aa7.11□□□□□ -1.27
SDCBP-211ENST00000523441 RNASEKQ6P5S7 137 aaKnown RBP7.11□□□□□ -1.27
SDCBP-211ENST00000523441 CARD19Q96LW7 228 aa7.11□□□□□ -1.27
SDCBP-211ENST00000523441 LINC00474Q9P2X8 69 aa7.11□□□□□ -1.27
SDCBP-211ENST00000523441 PSORS1C2Q9UIG4 136 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms