RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 J3QQQ9 107 aa9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 RPL39P62891 51 aaKnown RBP9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 BVES-AS1Q5T3Y7 98 aa9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 ZFP2Q6ZN57 461 aa9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 GATD1Q8NB37 220 aa9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 ANGP03950 147 aaKnown RBP9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 SPINK8P0C7L1 97 aa9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 ANKRD39Q53RE8 183 aa9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 TRAV8-2A0A0B4J237 113 aa9.88□□□□□ -0.83
PCDHGB1-201ENST00000523390 DEFB4AO15263 64 aa9.88□□□□□ -0.83
PCDHGB1-201ENST00000523390 DEFB135Q30KP9 77 aa9.88□□□□□ -0.83
PCDHGB1-201ENST00000523390 CRIP1P50238 77 aa9.87□□□□□ -0.83
PCDHGB1-201ENST00000523390 K7EMI3 77 aa9.87□□□□□ -0.83
PCDHGB1-201ENST00000523390 BBC3Q96PG8 261 aaPredicted RBP9.87□□□□□ -0.83
PCDHGB1-201ENST00000523390 C16orf74Q96GX8 76 aa9.87□□□□□ -0.83
PCDHGB1-201ENST00000523390 A0A0J9YXV3 536 aa9.87□□□□□ -0.83
PCDHGB1-201ENST00000523390 LEPROTO15243 131 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 SLC25A20O43772 301 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 CRLF1O75462 422 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 PSMB8P28062 276 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 ZNF702PQ9H963 129 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 Q6ZQT7 251 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 TTTY13Q9BZ97 58 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 NXPH4O95158 308 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 IGLC6P0CF74 106 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 DEFB114Q30KQ6 69 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 DEFB125Q8N687 156 aa9.86□□□□□ -0.83
PCDHGB1-201ENST00000523390 GYPEP15421 78 aa9.85□□□□□ -0.83
PCDHGB1-201ENST00000523390 PSCAO43653 123 aa9.85□□□□□ -0.83
PCDHGB1-201ENST00000523390 CENPEQ02224 2701 aa9.85□□□□□ -0.83
PCDHGB1-201ENST00000523390 LGALS9O00182 355 aa9.85□□□□□ -0.83
PCDHGB1-201ENST00000523390 MED14OSP0DP75 135 aa9.85□□□□□ -0.83
PCDHGB1-201ENST00000523390 SCGB1A1P11684 91 aa9.85□□□□□ -0.83
PCDHGB1-201ENST00000523390 HECTD1Q9ULT8 2610 aa9.85□□□□□ -0.83
PCDHGB1-201ENST00000523390 A0A1B0GV72 72 aa9.85□□□□□ -0.83
PCDHGB1-201ENST00000523390 C18orf65Q6ZTR6 163 aa9.85□□□□□ -0.83
PCDHGB1-201ENST00000523390 H3BMM0 161 aa9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 PLA2G2AP14555 144 aa9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 PCSK5Q92824 1860 aa9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 IGLV2-11P01706 119 aa9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 XCL1P47992 114 aa9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 ZFAND2AQ8N6M9 145 aa9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 K7EQD1 137 aa9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 HERVK_113P63121 156 aa9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 ATXN8Q156A1 80 aa9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 TNRC6BQ9UPQ9 1833 aaKnown RBP9.84□□□□□ -0.83
PCDHGB1-201ENST00000523390 MTURNQ8N3F0 131 aa9.83□□□□□ -0.84
PCDHGB1-201ENST00000523390 K7ERJ3 54 aa9.83□□□□□ -0.84
PCDHGB1-201ENST00000523390 PSMG3-AS1Q96PY0 264 aa9.83□□□□□ -0.84
PCDHGB1-201ENST00000523390 ZNF561-AS1K7EIQ3 104 aa9.83□□□□□ -0.84
PCDHGB1-201ENST00000523390 C5orf38Q86SI9 138 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 LY6G6DO95868 133 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 ATP6V0E2Q8NHE4 81 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 SPANXA1Q9NS26 97 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 PTPRBP23467 1997 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 TRAV8-3A0A0A6YYJ7 113 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 TAX1BP3O14907 124 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 ATP5G1P05496 136 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 LINC01006Q8NI28 216 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 DNAJC30Q96LL9 226 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 GTSF1LQ9H1H1 148 aa9.82□□□□□ -0.84
PCDHGB1-201ENST00000523390 IGLV1-40P01703 118 aa9.81□□□□□ -0.84
PCDHGB1-201ENST00000523390 P0DMU3 169 aa9.81□□□□□ -0.84
PCDHGB1-201ENST00000523390 FAM231AP0DMU4 169 aa9.81□□□□□ -0.84
PCDHGB1-201ENST00000523390 FAM231CP0DMU5 169 aa9.81□□□□□ -0.84
PCDHGB1-201ENST00000523390 TTC32Q5I0X7 151 aa9.81□□□□□ -0.84
PCDHGB1-201ENST00000523390 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
PCDHGB1-201ENST00000523390 TSPAN13O95857 204 aa9.81□□□□□ -0.84
PCDHGB1-201ENST00000523390 C9JAW5 83 aa9.8□□□□□ -0.84
PCDHGB1-201ENST00000523390 C2orf82Q6UX34 121 aa9.8□□□□□ -0.84
PCDHGB1-201ENST00000523390 Q6ZTI0 123 aa9.8□□□□□ -0.84
PCDHGB1-201ENST00000523390 SMR3AQ99954 134 aa9.8□□□□□ -0.84
PCDHGB1-201ENST00000523390 IGLV10-54A0A075B6I4 117 aa9.8□□□□□ -0.84
PCDHGB1-201ENST00000523390 CEND1Q8N111 149 aa9.8□□□□□ -0.84
PCDHGB1-201ENST00000523390 Q8N976 141 aa9.8□□□□□ -0.84
PCDHGB1-201ENST00000523390 UBE2WQ96B02 151 aa9.8□□□□□ -0.84
PCDHGB1-201ENST00000523390 OPRPNQ99935 248 aaPredicted RBP9.8□□□□□ -0.84
PCDHGB1-201ENST00000523390 C9orf118A6NHY6 69 aa9.79□□□□□ -0.84
PCDHGB1-201ENST00000523390 TMEM263Q8WUH6 116 aaKnown RBP9.79□□□□□ -0.84
PCDHGB1-201ENST00000523390 Q9H8V8 135 aa9.79□□□□□ -0.84
PCDHGB1-201ENST00000523390 FGF6P10767 208 aa9.79□□□□□ -0.84
PCDHGB1-201ENST00000523390 CELSR3Q9NYQ7 3312 aa9.79□□□□□ -0.84
PCDHGB1-201ENST00000523390 TET2Q6N021 2002 aaPredicted RBP9.79□□□□□ -0.84
PCDHGB1-201ENST00000523390 K7EP13 123 aa9.79□□□□□ -0.84
PCDHGB1-201ENST00000523390 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
PCDHGB1-201ENST00000523390 VPS13AQ96RL7 3174 aa9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 INSL3P51460 131 aa9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 PRR9Q5T870 116 aa9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 NDUFA11Q86Y39 141 aa9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 C11orf21Q9P2W6 132 aa9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 HHLA3Q9XRX5 114 aa9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 SPATA12Q7Z6I5 190 aa9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 ZMAT4Q9H898 229 aa9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 EDN2P20800 178 aa9.78□□□□□ -0.84
PCDHGB1-201ENST00000523390 ODF1Q14990 250 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms