RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ZNF22P17026 224 aaPredicted RBP6.8□□□□□ -1.32
CSMD1-212ENST00000523387 RPL32P62910 135 aaKnown RBP6.8□□□□□ -1.32
CSMD1-212ENST00000523387 C19orf54Q5BKX5 351 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 GAGE2AQ6NT46 116 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 EDA2RQ9HAV5 297 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 IGHV3OR16-12A0A075B7B8 117 aa6.8□□□□□ -1.32
CSMD1-212ENST00000523387 TMEM223A0PJW6 202 aa6.79□□□□□ -1.32
CSMD1-212ENST00000523387 C20orf203Q8NBC4 194 aa6.79□□□□□ -1.32
CSMD1-212ENST00000523387 TMEM263Q8WUH6 116 aaKnown RBP6.79□□□□□ -1.32
CSMD1-212ENST00000523387 AJUBAQ96IF1 538 aa6.79□□□□□ -1.32
CSMD1-212ENST00000523387 CUL9Q8IWT3 2517 aa6.79□□□□□ -1.32
CSMD1-212ENST00000523387 IGKV3OR2-268A0A0C4DH90 116 aa6.79□□□□□ -1.32
CSMD1-212ENST00000523387 LGALS9O00182 355 aa6.79□□□□□ -1.32
CSMD1-212ENST00000523387 CRYGDP07320 174 aa6.79□□□□□ -1.32
CSMD1-212ENST00000523387 POLR2KP53803 58 aaKnown RBP6.79□□□□□ -1.32
CSMD1-212ENST00000523387 Q8N6K4 173 aa6.79□□□□□ -1.32
CSMD1-212ENST00000523387 MDFICQ9P1T7 246 aa6.79□□□□□ -1.32
CSMD1-212ENST00000523387 IGHV3-38A0A0C4DH36 116 aa6.78□□□□□ -1.32
CSMD1-212ENST00000523387 IGHV1-69P01742 117 aa6.78□□□□□ -1.32
CSMD1-212ENST00000523387 EBI3Q14213 229 aa6.78□□□□□ -1.32
CSMD1-212ENST00000523387 CEMP1Q6PRD7 247 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-212ENST00000523387 CFAP161Q6P656 301 aa6.78□□□□□ -1.32
CSMD1-212ENST00000523387 GPHB5Q86YW7 130 aa6.78□□□□□ -1.32
CSMD1-212ENST00000523387 TOMM7Q9P0U1 55 aa6.78□□□□□ -1.32
CSMD1-212ENST00000523387 PRIMA1Q86XR5 153 aa6.78□□□□□ -1.32
CSMD1-212ENST00000523387 C5orf56Q8N8D9 126 aa6.78□□□□□ -1.32
CSMD1-212ENST00000523387 TRBV30A0A0K0K1B3 111 aa6.77□□□□□ -1.32
CSMD1-212ENST00000523387 PTPRQQ9UMZ3 2332 aa6.77□□□□□ -1.33
CSMD1-212ENST00000523387 IGHV4OR15-8A0A075B7B6 117 aa6.77□□□□□ -1.33
CSMD1-212ENST00000523387 A0A087WW49 117 aa6.77□□□□□ -1.33
CSMD1-212ENST00000523387 TSHBP01222 138 aa6.77□□□□□ -1.33
CSMD1-212ENST00000523387 OR13C6PQ8NH95 151 aa6.77□□□□□ -1.33
CSMD1-212ENST00000523387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-212ENST00000523387 TRAV13-1A0A0B4J241 112 aa6.77□□□□□ -1.33
CSMD1-212ENST00000523387 TRBV27A0A0K0K1C4 114 aa6.77□□□□□ -1.33
CSMD1-212ENST00000523387 IGKV2-29A2NJV5 120 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-212ENST00000523387 RS1O15537 224 aa6.77□□□□□ -1.33
CSMD1-212ENST00000523387 LINC01587Q99440 93 aa6.77□□□□□ -1.33
CSMD1-212ENST00000523387 ATRXP46100 2492 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 ITLN2Q8WWU7 325 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-212ENST00000523387 IGLV4-3A0A075B6K6 122 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 SIRPDQ9H106 197 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 ANKRD11Q6UB99 2663 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-212ENST00000523387 CEP295Q9C0D2 2601 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 IGHV3-16A0A0C4DH30 117 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 CITED1Q99966 193 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 IGHV1-58A0A0C4DH39 117 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 Q8NA96 180 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 ZNF580Q9UK33 172 aa6.76□□□□□ -1.33
CSMD1-212ENST00000523387 UBE2L6O14933 153 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 MIAQ16674 131 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 H7C423 109 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 BAALC-AS2P0C853 105 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 Q6Q795 121 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 DYNLRB2Q8TF09 96 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 Q9H8V8 135 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 WNK1Q9H4A3 2382 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 A8MZ25 164 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 M0QY20 66 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 SYNJ2BPP57105 145 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 NSUN5P1Q3KNT7 163 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 SBSPONQ8IVN8 264 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 U3KQE9 123 aa6.75□□□□□ -1.33
CSMD1-212ENST00000523387 CRPP02741 224 aa6.74□□□□□ -1.33
CSMD1-212ENST00000523387 ACYP1P07311 99 aa6.74□□□□□ -1.33
CSMD1-212ENST00000523387 INAFM2P0DMQ5 153 aa6.74□□□□□ -1.33
CSMD1-212ENST00000523387 Q6ZSV7 163 aa6.74□□□□□ -1.33
CSMD1-212ENST00000523387 PIMREGQ9BSJ6 248 aa6.74□□□□□ -1.33
CSMD1-212ENST00000523387 MRPL23Q16540 153 aaKnown RBP6.74□□□□□ -1.33
CSMD1-212ENST00000523387 SHISA2Q6UWI4 295 aa6.74□□□□□ -1.33
CSMD1-212ENST00000523387 PRRC2AP48634 2157 aaKnown RBP6.73□□□□□ -1.33
CSMD1-212ENST00000523387 TRBV6-5A0A0K0K1A5 114 aa6.73□□□□□ -1.33
CSMD1-212ENST00000523387 RNASE1P07998 156 aaKnown RBP6.73□□□□□ -1.33
CSMD1-212ENST00000523387 ELANEP08246 267 aa6.73□□□□□ -1.33
CSMD1-212ENST00000523387 BLCAPP62952 87 aa6.73□□□□□ -1.33
CSMD1-212ENST00000523387 ZNF575Q86XF7 245 aa6.73□□□□□ -1.33
CSMD1-212ENST00000523387 ZNF415Q09FC8 603 aa6.73□□□□□ -1.33
CSMD1-212ENST00000523387 ODF3Q96PU9 254 aa6.73□□□□□ -1.33
CSMD1-212ENST00000523387 LINC00158P58513 81 aa6.72□□□□□ -1.33
CSMD1-212ENST00000523387 DEFB131AP59861 70 aa6.72□□□□□ -1.33
CSMD1-212ENST00000523387 IGF2-ASQ6U949 168 aa6.72□□□□□ -1.33
CSMD1-212ENST00000523387 LST1O00453 97 aa6.72□□□□□ -1.33
CSMD1-212ENST00000523387 HOXD3P31249 432 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-212ENST00000523387 HIST1H4AP62805 103 aaKnown RBP6.72□□□□□ -1.33
CSMD1-212ENST00000523387 ATP5J2P56134 94 aa6.71□□□□□ -1.33
CSMD1-212ENST00000523387 TMEM61Q8N0U2 210 aa6.71□□□□□ -1.33
CSMD1-212ENST00000523387 FAM110AQ9BQ89 295 aa6.71□□□□□ -1.33
CSMD1-212ENST00000523387 NHLRC4P0CG21 123 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-212ENST00000523387 LINC00643Q86TS7 51 aa6.71□□□□□ -1.34
CSMD1-212ENST00000523387 VSIG2Q96IQ7 327 aa6.71□□□□□ -1.34
CSMD1-212ENST00000523387 KLLNB2CW77 178 aa6.71□□□□□ -1.34
CSMD1-212ENST00000523387 IGHV3-53P01767 116 aa6.71□□□□□ -1.34
CSMD1-212ENST00000523387 IGF2RP11717 2491 aa6.71□□□□□ -1.34
CSMD1-212ENST00000523387 M0QXV9 152 aa6.7□□□□□ -1.34
CSMD1-212ENST00000523387 KIF25-AS1Q9Y6Z4 181 aa6.7□□□□□ -1.34
CSMD1-212ENST00000523387 H3BUA1 57 aa6.7□□□□□ -1.34
CSMD1-212ENST00000523387 ADAMTSL4-AS1Q5T5F5 129 aa6.7□□□□□ -1.34
CSMD1-212ENST00000523387 SPANXDQ9BXN6 97 aa6.7□□□□□ -1.34
CSMD1-212ENST00000523387 PRO3102Q9H379 93 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms