RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 COX11Q9Y6N1 276 aa8.15□□□□□ -1.1
VEGFA-223ENST00000523125 F5H697 171 aa8.14□□□□□ -1.11
VEGFA-223ENST00000523125 BCL2P10415 239 aa8.14□□□□□ -1.11
VEGFA-223ENST00000523125 GNG4P50150 75 aa8.14□□□□□ -1.11
VEGFA-223ENST00000523125 FER1L6-AS1Q8NA97 138 aa8.14□□□□□ -1.11
VEGFA-223ENST00000523125 OR2D3Q8NGH3 330 aa8.14□□□□□ -1.11
VEGFA-223ENST00000523125 UBE2WQ96B02 151 aa8.14□□□□□ -1.11
VEGFA-223ENST00000523125 AP1S3Q96PC3 154 aa8.14□□□□□ -1.11
VEGFA-223ENST00000523125 VAX2Q9UIW0 290 aa8.14□□□□□ -1.11
VEGFA-223ENST00000523125 IGKV2D-24A0A075B6R9 120 aa8.13□□□□□ -1.11
VEGFA-223ENST00000523125 RPS20P60866 119 aaKnown RBP8.13□□□□□ -1.11
VEGFA-223ENST00000523125 ELOBQ15370 118 aa8.13□□□□□ -1.11
VEGFA-223ENST00000523125 MPV17L2Q567V2 206 aa8.13□□□□□ -1.11
VEGFA-223ENST00000523125 ENHOQ6UWT2 76 aa8.13□□□□□ -1.11
VEGFA-223ENST00000523125 Q6ZSA8 131 aa8.13□□□□□ -1.11
VEGFA-223ENST00000523125 FRZBQ92765 325 aa8.13□□□□□ -1.11
VEGFA-223ENST00000523125 RMI2Q96E14 147 aa8.13□□□□□ -1.11
VEGFA-223ENST00000523125 DAZAP1Q96EP5 407 aaKnown RBP8.13□□□□□ -1.11
VEGFA-223ENST00000523125 MED9Q9NWA0 146 aa8.13□□□□□ -1.11
VEGFA-223ENST00000523125 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.12□□□□□ -1.11
VEGFA-223ENST00000523125 TMEM262E9PQX1 116 aa8.12□□□□□ -1.11
VEGFA-223ENST00000523125 M0QY20 66 aa8.12□□□□□ -1.11
VEGFA-223ENST00000523125 IFNA1P01562 189 aa8.12□□□□□ -1.11
VEGFA-223ENST00000523125 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
VEGFA-223ENST00000523125 INAFM2P0DMQ5 153 aa8.12□□□□□ -1.11
VEGFA-223ENST00000523125 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
VEGFA-223ENST00000523125 TPPP3Q9BW30 176 aa8.12□□□□□ -1.11
VEGFA-223ENST00000523125 P01737 135 aa8.11□□□□□ -1.11
VEGFA-223ENST00000523125 CACNG7P62955 275 aa8.11□□□□□ -1.11
VEGFA-223ENST00000523125 Q0VG73 95 aa8.11□□□□□ -1.11
VEGFA-223ENST00000523125 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
VEGFA-223ENST00000523125 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
VEGFA-223ENST00000523125 C15orf54Q8N8G6 183 aa8.11□□□□□ -1.11
VEGFA-223ENST00000523125 F2Z2F3 143 aa8.1□□□□□ -1.11
VEGFA-223ENST00000523125 K7EN84 100 aa8.1□□□□□ -1.11
VEGFA-223ENST00000523125 SUMO4Q6EEV6 95 aa8.1□□□□□ -1.11
VEGFA-223ENST00000523125 KCNIP4Q6PIL6 250 aa8.1□□□□□ -1.11
VEGFA-223ENST00000523125 Q8N976 141 aa8.1□□□□□ -1.11
VEGFA-223ENST00000523125 NUDT10Q8NFP7 164 aa8.1□□□□□ -1.11
VEGFA-223ENST00000523125 NUDT11Q96G61 164 aa8.1□□□□□ -1.11
VEGFA-223ENST00000523125 CHCHD5Q9BSY4 110 aa8.1□□□□□ -1.11
VEGFA-223ENST00000523125 XKRY2A2RUG3 117 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 ANGP03950 147 aaKnown RBP8.09□□□□□ -1.11
VEGFA-223ENST00000523125 MGPP08493 103 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 NTF3P20783 257 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 TAGLN2P37802 199 aaKnown RBP8.09□□□□□ -1.11
VEGFA-223ENST00000523125 CTRLP40313 264 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 IQCJQ1A5X6 159 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 TMEM97Q5BJF2 176 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 AKAP14Q86UN6 197 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.09□□□□□ -1.11
VEGFA-223ENST00000523125 OCC1Q8TAD7 63 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 BIN3Q9NQY0 253 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 MYCBP2O75592 4640 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 HERC1Q15751 4861 aa8.09□□□□□ -1.11
VEGFA-223ENST00000523125 FLG2Q5D862 2391 aaPredicted RBP8.08□□□□□ -1.12
VEGFA-223ENST00000523125 RBX1P62877 108 aa8.08□□□□□ -1.12
VEGFA-223ENST00000523125 GAGE6Q13070 117 aa8.08□□□□□ -1.12
VEGFA-223ENST00000523125 WDR73Q6P4I2 378 aa8.08□□□□□ -1.12
VEGFA-223ENST00000523125 ALKAL2Q6UX46 152 aa8.08□□□□□ -1.12
VEGFA-223ENST00000523125 LYPD6BQ8NI32 183 aa8.08□□□□□ -1.12
VEGFA-223ENST00000523125 C1orf43Q9BWL3 253 aa8.08□□□□□ -1.12
VEGFA-223ENST00000523125 CNFNQ9BYD5 112 aa8.08□□□□□ -1.12
VEGFA-223ENST00000523125 RNASE7Q9H1E1 156 aaKnown RBP8.08□□□□□ -1.12
VEGFA-223ENST00000523125 PRR34Q9NV39 138 aa8.08□□□□□ -1.12
VEGFA-223ENST00000523125 hCG_2014768A0A024R1R8 64 aa8.07□□□□□ -1.12
VEGFA-223ENST00000523125 TRBV25-1A0A075B6N4 114 aa8.07□□□□□ -1.12
VEGFA-223ENST00000523125 H7C1H1 209 aa8.07□□□□□ -1.12
VEGFA-223ENST00000523125 TRGC1P0CF51 173 aa8.07□□□□□ -1.12
VEGFA-223ENST00000523125 NKX2-5P52952 324 aaPredicted RBP8.07□□□□□ -1.12
VEGFA-223ENST00000523125 PKIAP61925 76 aa8.07□□□□□ -1.12
VEGFA-223ENST00000523125 KRTAP26-1Q6PEX3 210 aa8.07□□□□□ -1.12
VEGFA-223ENST00000523125 RASL11AQ6T310 242 aa8.07□□□□□ -1.12
VEGFA-223ENST00000523125 DPH3P1Q9H4G8 78 aa8.07□□□□□ -1.12
VEGFA-223ENST00000523125 IGHV1-24A0A0C4DH33 117 aa8.06□□□□□ -1.12
VEGFA-223ENST00000523125 CRPP02741 224 aa8.06□□□□□ -1.12
VEGFA-223ENST00000523125 MIAQ16674 131 aa8.06□□□□□ -1.12
VEGFA-223ENST00000523125 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
VEGFA-223ENST00000523125 GTSF1Q8WW33 167 aa8.06□□□□□ -1.12
VEGFA-223ENST00000523125 RPP21Q9H633 154 aaKnown RBP8.06□□□□□ -1.12
VEGFA-223ENST00000523125 NIT2Q9NQR4 276 aa8.06□□□□□ -1.12
VEGFA-223ENST00000523125 TMEM250H0YL14 139 aa8.05□□□□□ -1.12
VEGFA-223ENST00000523125 BLOC1S1P78537 153 aa8.05□□□□□ -1.12
VEGFA-223ENST00000523125 CLPSL2Q6UWE3 100 aa8.05□□□□□ -1.12
VEGFA-223ENST00000523125 DMBT1Q9UGM3 2413 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-223ENST00000523125 USP17L23D6RBM5 183 aa8.04□□□□□ -1.12
VEGFA-223ENST00000523125 TWIST1Q15672 202 aa8.04□□□□□ -1.12
VEGFA-223ENST00000523125 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
VEGFA-223ENST00000523125 C20orf203Q8NBC4 194 aa8.04□□□□□ -1.12
VEGFA-223ENST00000523125 DEFB104AQ8WTQ1 72 aa8.04□□□□□ -1.12
VEGFA-223ENST00000523125 PGLYRP4Q96LB8 373 aa8.04□□□□□ -1.12
VEGFA-223ENST00000523125 IGLV4-60A0A075B6I1 120 aa8.03□□□□□ -1.12
VEGFA-223ENST00000523125 A0A1B0GUV1 79 aa8.03□□□□□ -1.12
VEGFA-223ENST00000523125 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
VEGFA-223ENST00000523125 PRSS1P07477 247 aa8.03□□□□□ -1.12
VEGFA-223ENST00000523125 FOXA3P55318 350 aaPredicted RBP8.03□□□□□ -1.12
VEGFA-223ENST00000523125 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
VEGFA-223ENST00000523125 GATD1Q8NB37 220 aa8.03□□□□□ -1.12
VEGFA-223ENST00000523125 TMEM243Q9BU79 118 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms