RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 FER1L6-AS1Q8NA97 138 aa12.35□□□□□ -0.43
SPIDR-220ENST00000522900 VAX2Q9UIW0 290 aa12.35□□□□□ -0.43
SPIDR-220ENST00000522900 TMEM262E9PQX1 116 aa12.34□□□□□ -0.43
SPIDR-220ENST00000522900 RPS20P60866 119 aaKnown RBP12.34□□□□□ -0.43
SPIDR-220ENST00000522900 NTM-AS1Q6ZSK4 140 aa12.34□□□□□ -0.43
SPIDR-220ENST00000522900 UBE2WQ96B02 151 aa12.34□□□□□ -0.43
SPIDR-220ENST00000522900 FAM30AQ9NZY2 134 aa12.34□□□□□ -0.43
SPIDR-220ENST00000522900 IGKV2D-24A0A075B6R9 120 aa12.33□□□□□ -0.44
SPIDR-220ENST00000522900 SMIM17P0DL12 118 aa12.33□□□□□ -0.44
SPIDR-220ENST00000522900 AKAP14Q86UN6 197 aa12.33□□□□□ -0.44
SPIDR-220ENST00000522900 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
SPIDR-220ENST00000522900 AP1S3Q96PC3 154 aa12.33□□□□□ -0.44
SPIDR-220ENST00000522900 P01737 135 aa12.32□□□□□ -0.44
SPIDR-220ENST00000522900 CHCHD7Q9BUK0 85 aa12.32□□□□□ -0.44
SPIDR-220ENST00000522900 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-220ENST00000522900 ELOBQ15370 118 aa12.31□□□□□ -0.44
SPIDR-220ENST00000522900 MPV17L2Q567V2 206 aa12.31□□□□□ -0.44
SPIDR-220ENST00000522900 Q5VSD8 79 aa12.31□□□□□ -0.44
SPIDR-220ENST00000522900 LYZL1Q6UWQ5 148 aa12.31□□□□□ -0.44
SPIDR-220ENST00000522900 ENHOQ6UWT2 76 aa12.31□□□□□ -0.44
SPIDR-220ENST00000522900 NUDT10Q8NFP7 164 aa12.31□□□□□ -0.44
SPIDR-220ENST00000522900 NUDT11Q96G61 164 aa12.31□□□□□ -0.44
SPIDR-220ENST00000522900 TMEM70Q9BUB7 260 aa12.31□□□□□ -0.44
SPIDR-220ENST00000522900 COX11Q9Y6N1 276 aa12.31□□□□□ -0.44
SPIDR-220ENST00000522900 M0QY20 66 aa12.3□□□□□ -0.44
SPIDR-220ENST00000522900 MGPP08493 103 aa12.3□□□□□ -0.44
SPIDR-220ENST00000522900 KCNIP4Q6PIL6 250 aa12.3□□□□□ -0.44
SPIDR-220ENST00000522900 ALKAL2Q6UX46 152 aa12.3□□□□□ -0.44
SPIDR-220ENST00000522900 C15orf54Q8N8G6 183 aa12.3□□□□□ -0.44
SPIDR-220ENST00000522900 RMI2Q96E14 147 aa12.3□□□□□ -0.44
SPIDR-220ENST00000522900 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
SPIDR-220ENST00000522900 FAT1Q14517 4588 aa12.3□□□□□ -0.44
SPIDR-220ENST00000522900 K7EN84 100 aa12.29□□□□□ -0.44
SPIDR-220ENST00000522900 CACNG7P62955 275 aa12.29□□□□□ -0.44
SPIDR-220ENST00000522900 SUMO4Q6EEV6 95 aa12.29□□□□□ -0.44
SPIDR-220ENST00000522900 ATRAIDQ6UW56 229 aa12.29□□□□□ -0.44
SPIDR-220ENST00000522900 OCC1Q8TAD7 63 aa12.29□□□□□ -0.44
SPIDR-220ENST00000522900 XKRY2A2RUG3 117 aa12.28□□□□□ -0.44
SPIDR-220ENST00000522900 F2Z2F3 143 aa12.28□□□□□ -0.44
SPIDR-220ENST00000522900 NTF3P20783 257 aa12.28□□□□□ -0.44
SPIDR-220ENST00000522900 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
SPIDR-220ENST00000522900 Q8N976 141 aa12.28□□□□□ -0.44
SPIDR-220ENST00000522900 BIN3Q9NQY0 253 aa12.28□□□□□ -0.44
SPIDR-220ENST00000522900 TAGLN2P37802 199 aaKnown RBP12.27□□□□□ -0.45
SPIDR-220ENST00000522900 FRZBQ92765 325 aa12.27□□□□□ -0.45
SPIDR-220ENST00000522900 RNASE7Q9H1E1 156 aaKnown RBP12.27□□□□□ -0.45
SPIDR-220ENST00000522900 ANGP03950 147 aaKnown RBP12.26□□□□□ -0.45
SPIDR-220ENST00000522900 Q0VG73 95 aa12.26□□□□□ -0.45
SPIDR-220ENST00000522900 GAGE6Q13070 117 aa12.26□□□□□ -0.45
SPIDR-220ENST00000522900 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.26□□□□□ -0.45
SPIDR-220ENST00000522900 INAFM2P0DMQ5 153 aa12.25□□□□□ -0.45
SPIDR-220ENST00000522900 NKX2-5P52952 324 aaPredicted RBP12.25□□□□□ -0.45
SPIDR-220ENST00000522900 BLOC1S1P78537 153 aa12.25□□□□□ -0.45
SPIDR-220ENST00000522900 TMEM97Q5BJF2 176 aa12.25□□□□□ -0.45
SPIDR-220ENST00000522900 CTRLP40313 264 aa12.24□□□□□ -0.45
SPIDR-220ENST00000522900 RBX1P62877 108 aa12.24□□□□□ -0.45
SPIDR-220ENST00000522900 WDR73Q6P4I2 378 aa12.24□□□□□ -0.45
SPIDR-220ENST00000522900 LYPD6BQ8NI32 183 aa12.24□□□□□ -0.45
SPIDR-220ENST00000522900 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
SPIDR-220ENST00000522900 RPP21Q9H633 154 aaKnown RBP12.24□□□□□ -0.45
SPIDR-220ENST00000522900 TRBV25-1A0A075B6N4 114 aa12.23□□□□□ -0.45
SPIDR-220ENST00000522900 H7C1H1 209 aa12.23□□□□□ -0.45
SPIDR-220ENST00000522900 TRGC1P0CF51 173 aa12.23□□□□□ -0.45
SPIDR-220ENST00000522900 IQCJQ1A5X6 159 aa12.23□□□□□ -0.45
SPIDR-220ENST00000522900 RASL11AQ6T310 242 aa12.23□□□□□ -0.45
SPIDR-220ENST00000522900 Q6ZSA8 131 aa12.23□□□□□ -0.45
SPIDR-220ENST00000522900 C1orf43Q9BWL3 253 aa12.23□□□□□ -0.45
SPIDR-220ENST00000522900 DPH3P1Q9H4G8 78 aa12.23□□□□□ -0.45
SPIDR-220ENST00000522900 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
SPIDR-220ENST00000522900 A0A1B0GVG6 124 aa12.22□□□□□ -0.45
SPIDR-220ENST00000522900 CRPP02741 224 aa12.22□□□□□ -0.45
SPIDR-220ENST00000522900 TWIST1Q15672 202 aa12.22□□□□□ -0.45
SPIDR-220ENST00000522900 CLPSL2Q6UWE3 100 aa12.22□□□□□ -0.45
SPIDR-220ENST00000522900 GTSF1Q8WW33 167 aa12.22□□□□□ -0.45
SPIDR-220ENST00000522900 VPS13BQ7Z7G8 4022 aa12.22□□□□□ -0.45
SPIDR-220ENST00000522900 DNAH8Q96JB1 4490 aa12.22□□□□□ -0.45
SPIDR-220ENST00000522900 SRRM2Q9UQ35 2752 aaKnown RBP12.22□□□□□ -0.45
SPIDR-220ENST00000522900 TMEM250H0YL14 139 aa12.21□□□□□ -0.45
SPIDR-220ENST00000522900 FAM229AH3BQW9 127 aa12.21□□□□□ -0.45
SPIDR-220ENST00000522900 PKIAP61925 76 aa12.21□□□□□ -0.45
SPIDR-220ENST00000522900 LINC00269Q8N2A0 174 aa12.21□□□□□ -0.45
SPIDR-220ENST00000522900 CNFNQ9BYD5 112 aa12.21□□□□□ -0.45
SPIDR-220ENST00000522900 NIT2Q9NQR4 276 aa12.21□□□□□ -0.45
SPIDR-220ENST00000522900 PRR34Q9NV39 138 aa12.21□□□□□ -0.45
SPIDR-220ENST00000522900 CEBPGP53567 150 aa12.2□□□□□ -0.46
SPIDR-220ENST00000522900 FOXA3P55318 350 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-220ENST00000522900 TRAV26-2A0A0B4J265 109 aa12.19□□□□□ -0.46
SPIDR-220ENST00000522900 KRTAP26-1Q6PEX3 210 aa12.19□□□□□ -0.46
SPIDR-220ENST00000522900 GATD1Q8NB37 220 aa12.19□□□□□ -0.46
SPIDR-220ENST00000522900 GATCO43716 136 aaKnown RBP12.18□□□□□ -0.46
SPIDR-220ENST00000522900 HLA-DQA1P01909 254 aa12.18□□□□□ -0.46
SPIDR-220ENST00000522900 MIAQ16674 131 aa12.18□□□□□ -0.46
SPIDR-220ENST00000522900 C20orf203Q8NBC4 194 aa12.18□□□□□ -0.46
SPIDR-220ENST00000522900 IGLV4-60A0A075B6I1 120 aa12.17□□□□□ -0.46
SPIDR-220ENST00000522900 USP17L23D6RBM5 183 aa12.17□□□□□ -0.46
SPIDR-220ENST00000522900 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
SPIDR-220ENST00000522900 FAM231DQ6ZW35 169 aa12.16□□□□□ -0.46
SPIDR-220ENST00000522900 PGLYRP4Q96LB8 373 aa12.16□□□□□ -0.46
SPIDR-220ENST00000522900 EIF5A2Q9GZV4 153 aaKnown RBP12.16□□□□□ -0.46
SPIDR-220ENST00000522900 GFRA4Q9GZZ7 299 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms