RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 KCNIP4Q6PIL6 250 aa9.8□□□□□ -0.84
TRAPPC9-213ENST00000522504 OR10G8Q8NGN5 311 aa9.8□□□□□ -0.84
TRAPPC9-213ENST00000522504 MAP1LC3B2A6NCE7 125 aa9.79□□□□□ -0.84
TRAPPC9-213ENST00000522504 FAM74A7A6NL05 159 aa9.79□□□□□ -0.84
TRAPPC9-213ENST00000522504 FAM162BQ5T6X4 162 aa9.79□□□□□ -0.84
TRAPPC9-213ENST00000522504 KRTAP26-1Q6PEX3 210 aa9.79□□□□□ -0.84
TRAPPC9-213ENST00000522504 MAP1LC3BQ9GZQ8 125 aa9.79□□□□□ -0.84
TRAPPC9-213ENST00000522504 CRPP02741 224 aa9.78□□□□□ -0.84
TRAPPC9-213ENST00000522504 ANGP03950 147 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-213ENST00000522504 H2AFB1P0C5Y9 115 aa9.78□□□□□ -0.84
TRAPPC9-213ENST00000522504 ZNF674Q2M3X9 581 aa9.78□□□□□ -0.84
TRAPPC9-213ENST00000522504 LINC01559Q495D7 138 aa9.78□□□□□ -0.84
TRAPPC9-213ENST00000522504 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
TRAPPC9-213ENST00000522504 C9orf163Q8N9P6 203 aa9.78□□□□□ -0.84
TRAPPC9-213ENST00000522504 NEXN-AS1Q8NBZ9 246 aa9.78□□□□□ -0.84
TRAPPC9-213ENST00000522504 A0A1B0GV50 99 aa9.77□□□□□ -0.85
TRAPPC9-213ENST00000522504 IFITM2Q01629 132 aa9.77□□□□□ -0.85
TRAPPC9-213ENST00000522504 PRR27Q6MZM9 219 aa9.77□□□□□ -0.85
TRAPPC9-213ENST00000522504 NTM-AS1Q6ZSK4 140 aa9.77□□□□□ -0.85
TRAPPC9-213ENST00000522504 ZFP82Q8N141 532 aa9.77□□□□□ -0.85
TRAPPC9-213ENST00000522504 SFT2D1Q8WV19 159 aa9.77□□□□□ -0.85
TRAPPC9-213ENST00000522504 HIST1H2BAQ96A08 127 aa9.77□□□□□ -0.85
TRAPPC9-213ENST00000522504 ZFP30Q9Y2G7 519 aa9.77□□□□□ -0.85
TRAPPC9-213ENST00000522504 BLOC1S1P78537 153 aa9.76□□□□□ -0.85
TRAPPC9-213ENST00000522504 DGAT2L7PQ6IED9 249 aa9.76□□□□□ -0.85
TRAPPC9-213ENST00000522504 CLPSL2Q6UWE3 100 aa9.76□□□□□ -0.85
TRAPPC9-213ENST00000522504 MBD3L1Q8WWY6 194 aa9.76□□□□□ -0.85
TRAPPC9-213ENST00000522504 CHCHD5Q9BSY4 110 aa9.76□□□□□ -0.85
TRAPPC9-213ENST00000522504 PRR34Q9NV39 138 aa9.76□□□□□ -0.85
TRAPPC9-213ENST00000522504 LTAP01374 205 aa9.75□□□□□ -0.85
TRAPPC9-213ENST00000522504 RAB4BP61018 213 aa9.75□□□□□ -0.85
TRAPPC9-213ENST00000522504 MIAQ16674 131 aa9.75□□□□□ -0.85
TRAPPC9-213ENST00000522504 OR10AG1Q8NH19 301 aa9.75□□□□□ -0.85
TRAPPC9-213ENST00000522504 TEX46H3BTG2 121 aa9.74□□□□□ -0.85
TRAPPC9-213ENST00000522504 RBX1P62877 108 aa9.74□□□□□ -0.85
TRAPPC9-213ENST00000522504 RPL19P84098 196 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-213ENST00000522504 ZNF56Q15929 161 aa9.74□□□□□ -0.85
TRAPPC9-213ENST00000522504 LINC00269Q8N2A0 174 aa9.74□□□□□ -0.85
TRAPPC9-213ENST00000522504 FMC1Q96HJ9 113 aa9.74□□□□□ -0.85
TRAPPC9-213ENST00000522504 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
TRAPPC9-213ENST00000522504 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
TRAPPC9-213ENST00000522504 GAGE6Q13070 117 aa9.73□□□□□ -0.85
TRAPPC9-213ENST00000522504 NKX6-2Q9C056 277 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-213ENST00000522504 TRAV1-1A0A0B4J248 108 aa9.72□□□□□ -0.85
TRAPPC9-213ENST00000522504 TRBV6-1A0A0K0K1D8 114 aa9.72□□□□□ -0.85
TRAPPC9-213ENST00000522504 RAB14P61106 215 aa9.72□□□□□ -0.85
TRAPPC9-213ENST00000522504 UBE2G1P62253 170 aa9.72□□□□□ -0.85
TRAPPC9-213ENST00000522504 CIRBPQ14011 172 aaKnown RBP9.72□□□□□ -0.85
TRAPPC9-213ENST00000522504 Q6ZRU5 148 aa9.72□□□□□ -0.85
TRAPPC9-213ENST00000522504 SLPIP03973 132 aa9.71□□□□□ -0.86
TRAPPC9-213ENST00000522504 CHTF8P0CG12 524 aa9.71□□□□□ -0.86
TRAPPC9-213ENST00000522504 CCL20P78556 96 aa9.71□□□□□ -0.86
TRAPPC9-213ENST00000522504 VAX2Q9UIW0 290 aa9.71□□□□□ -0.86
TRAPPC9-213ENST00000522504 IGLV10-54A0A075B6I4 117 aa9.7□□□□□ -0.86
TRAPPC9-213ENST00000522504 SSTP61278 116 aa9.7□□□□□ -0.86
TRAPPC9-213ENST00000522504 SSBP4Q9BWG4 385 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC9-213ENST00000522504 GNG13Q9P2W3 67 aa9.7□□□□□ -0.86
TRAPPC9-213ENST00000522504 KIF25-AS1Q9Y6Z4 181 aa9.7□□□□□ -0.86
TRAPPC9-213ENST00000522504 SNAI2O43623 268 aa9.69□□□□□ -0.86
TRAPPC9-213ENST00000522504 IFNA1P01562 189 aa9.69□□□□□ -0.86
TRAPPC9-213ENST00000522504 CNBPP62633 177 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-213ENST00000522504 ODF1Q14990 250 aa9.69□□□□□ -0.86
TRAPPC9-213ENST00000522504 CST9LP1Q5W188 147 aa9.69□□□□□ -0.86
TRAPPC9-213ENST00000522504 LYPD6BQ8NI32 183 aa9.69□□□□□ -0.86
TRAPPC9-213ENST00000522504 DERL1Q9BUN8 251 aa9.69□□□□□ -0.86
TRAPPC9-213ENST00000522504 MANBALQ9NQG1 85 aa9.69□□□□□ -0.86
TRAPPC9-213ENST00000522504 A0A087WYN8 130 aa9.68□□□□□ -0.86
TRAPPC9-213ENST00000522504 F5H697 171 aa9.68□□□□□ -0.86
TRAPPC9-213ENST00000522504 PAGE4O60829 102 aa9.68□□□□□ -0.86
TRAPPC9-213ENST00000522504 AKR1C3P42330 323 aa9.68□□□□□ -0.86
TRAPPC9-213ENST00000522504 PKIAP61925 76 aa9.68□□□□□ -0.86
TRAPPC9-213ENST00000522504 CLLU1Q5K131 121 aa9.68□□□□□ -0.86
TRAPPC9-213ENST00000522504 GFRA4Q9GZZ7 299 aa9.68□□□□□ -0.86
TRAPPC9-213ENST00000522504 hDV102S1A0JD36 115 aa9.67□□□□□ -0.86
TRAPPC9-213ENST00000522504 REG3AQ06141 175 aa9.67□□□□□ -0.86
TRAPPC9-213ENST00000522504 CLRN3Q8NCR9 226 aa9.67□□□□□ -0.86
TRAPPC9-213ENST00000522504 MLST8Q9BVC4 326 aa9.67□□□□□ -0.86
TRAPPC9-213ENST00000522504 CXCL1P09341 107 aa9.66□□□□□ -0.86
TRAPPC9-213ENST00000522504 OR5AL1P0C617 328 aa9.66□□□□□ -0.86
TRAPPC9-213ENST00000522504 IQCJQ1A5X6 159 aa9.66□□□□□ -0.86
TRAPPC9-213ENST00000522504 SPANXN1Q5VSR9 72 aa9.66□□□□□ -0.86
TRAPPC9-213ENST00000522504 C20orf203Q8NBC4 194 aa9.66□□□□□ -0.86
TRAPPC9-213ENST00000522504 SPACA4Q8TDM5 124 aa9.66□□□□□ -0.86
TRAPPC9-213ENST00000522504 TCEAL7Q9BRU2 100 aa9.66□□□□□ -0.86
TRAPPC9-213ENST00000522504 IGLV4-60A0A075B6I1 120 aa9.65□□□□□ -0.86
TRAPPC9-213ENST00000522504 TRBV25-1A0A075B6N4 114 aa9.65□□□□□ -0.86
TRAPPC9-213ENST00000522504 BCL2P10415 239 aa9.65□□□□□ -0.86
TRAPPC9-213ENST00000522504 TMEM97Q5BJF2 176 aa9.65□□□□□ -0.86
TRAPPC9-213ENST00000522504 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC9-213ENST00000522504 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
TRAPPC9-213ENST00000522504 IGHV1-24A0A0C4DH33 117 aa9.64□□□□□ -0.87
TRAPPC9-213ENST00000522504 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
TRAPPC9-213ENST00000522504 M0QY20 66 aa9.64□□□□□ -0.87
TRAPPC9-213ENST00000522504 PHOX2AO14813 284 aa9.64□□□□□ -0.87
TRAPPC9-213ENST00000522504 DPH3Q96FX2 82 aa9.64□□□□□ -0.87
TRAPPC9-213ENST00000522504 FAM210AQ96ND0 272 aa9.64□□□□□ -0.87
TRAPPC9-213ENST00000522504 TAGLN2P37802 199 aaKnown RBP9.63□□□□□ -0.87
TRAPPC9-213ENST00000522504 MEF2BQ02080 365 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-213ENST00000522504 BAGE2Q86Y30 109 aa9.63□□□□□ -0.87
TRAPPC9-213ENST00000522504 EIF5A2Q9GZV4 153 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms