RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ODF3BA8MYP8 253 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 C5orf38Q86SI9 138 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 CCDC168Q8NDH2 2452 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 PSCAO43653 123 aa10.53□□□□□ -0.72
SYNPO-205ENST00000522122 FSTL3O95633 263 aa10.53□□□□□ -0.72
SYNPO-205ENST00000522122 LY6LH3BQJ8 138 aa10.53□□□□□ -0.72
SYNPO-205ENST00000522122 C3orf56Q8N813 242 aa10.53□□□□□ -0.72
SYNPO-205ENST00000522122 TRBV12-3P01733 135 aa10.53□□□□□ -0.72
SYNPO-205ENST00000522122 CCDC140Q96MF4 163 aa10.53□□□□□ -0.72
SYNPO-205ENST00000522122 TANC2Q9HCD6 1990 aa10.52□□□□□ -0.72
SYNPO-205ENST00000522122 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.72
SYNPO-205ENST00000522122 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
SYNPO-205ENST00000522122 TLN1Q9Y490 2541 aaKnown RBP10.52□□□□□ -0.73
SYNPO-205ENST00000522122 CRYBA4P53673 196 aa10.52□□□□□ -0.73
SYNPO-205ENST00000522122 RPL32P62910 135 aaKnown RBP10.52□□□□□ -0.73
SYNPO-205ENST00000522122 DAZ2Q13117 558 aaKnown RBP10.51□□□□□ -0.73
SYNPO-205ENST00000522122 DAZ4Q86SG3 579 aaKnown RBP10.51□□□□□ -0.73
SYNPO-205ENST00000522122 DAZ3Q9NR90 486 aaKnown RBP10.51□□□□□ -0.73
SYNPO-205ENST00000522122 NAV2Q8IVL1 2488 aa10.51□□□□□ -0.73
SYNPO-205ENST00000522122 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
SYNPO-205ENST00000522122 PIEZO1Q92508 2521 aa10.51□□□□□ -0.73
SYNPO-205ENST00000522122 TMEM89A2RUT3 159 aa10.51□□□□□ -0.73
SYNPO-205ENST00000522122 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
SYNPO-205ENST00000522122 DEFB113Q30KQ7 82 aa10.51□□□□□ -0.73
SYNPO-205ENST00000522122 ICOSQ9Y6W8 199 aa10.51□□□□□ -0.73
SYNPO-205ENST00000522122 UTRNP46939 3433 aa10.5□□□□□ -0.73
SYNPO-205ENST00000522122 A0A0J9YX75 114 aa10.5□□□□□ -0.73
SYNPO-205ENST00000522122 J3QKU1 62 aa10.5□□□□□ -0.73
SYNPO-205ENST00000522122 K7EQD1 137 aa10.5□□□□□ -0.73
SYNPO-205ENST00000522122 LMO4P61968 165 aa10.5□□□□□ -0.73
SYNPO-205ENST00000522122 C20orf203Q8NBC4 194 aa10.5□□□□□ -0.73
SYNPO-205ENST00000522122 LINC01548A6NM66 108 aa10.5□□□□□ -0.73
SYNPO-205ENST00000522122 DSCR8Q96T75 97 aa10.5□□□□□ -0.73
SYNPO-205ENST00000522122 A0A0J9YY99 117 aa10.5□□□□□ -0.73
SYNPO-205ENST00000522122 ACYP1P07311 99 aa10.49□□□□□ -0.73
SYNPO-205ENST00000522122 TRBV7-3A0A075B6L6 115 aa10.49□□□□□ -0.73
SYNPO-205ENST00000522122 RNF185Q96GF1 192 aa10.49□□□□□ -0.73
SYNPO-205ENST00000522122 C16orf74Q96GX8 76 aa10.49□□□□□ -0.73
SYNPO-205ENST00000522122 SND1-IT1Q9HBX3 110 aa10.49□□□□□ -0.73
SYNPO-205ENST00000522122 A6NDX4 124 aa10.49□□□□□ -0.73
SYNPO-205ENST00000522122 NRGNQ92686 78 aa10.49□□□□□ -0.73
SYNPO-205ENST00000522122 IGF2RP11717 2491 aa10.49□□□□□ -0.73
SYNPO-205ENST00000522122 FOXI1Q12951 378 aa10.49□□□□□ -0.73
SYNPO-205ENST00000522122 NCOR2Q9Y618 2525 aa10.48□□□□□ -0.73
SYNPO-205ENST00000522122 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
SYNPO-205ENST00000522122 TNFRSF13BO14836 293 aaPredicted RBP10.48□□□□□ -0.73
SYNPO-205ENST00000522122 ATP6V0E2Q8NHE4 81 aa10.48□□□□□ -0.73
SYNPO-205ENST00000522122 ORMDL1Q9P0S3 153 aa10.48□□□□□ -0.73
SYNPO-205ENST00000522122 H0YGX0 51 aa10.47□□□□□ -0.73
SYNPO-205ENST00000522122 Q6ZQT7 251 aa10.47□□□□□ -0.73
SYNPO-205ENST00000522122 Q71RC1 249 aaPredicted RBP10.47□□□□□ -0.73
SYNPO-205ENST00000522122 DAND5Q8N907 189 aa10.47□□□□□ -0.73
SYNPO-205ENST00000522122 TM2D2Q9BX73 214 aa10.47□□□□□ -0.73
SYNPO-205ENST00000522122 TRAV25A0A0B4J276 109 aa10.47□□□□□ -0.73
SYNPO-205ENST00000522122 PIFOQ8TCI5 191 aa10.47□□□□□ -0.73
SYNPO-205ENST00000522122 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
SYNPO-205ENST00000522122 HIVEP3Q5T1R4 2406 aa10.47□□□□□ -0.73
SYNPO-205ENST00000522122 TMEM61Q8N0U2 210 aa10.47□□□□□ -0.73
SYNPO-205ENST00000522122 GYPEP15421 78 aa10.46□□□□□ -0.73
SYNPO-205ENST00000522122 OPRPNQ99935 248 aaPredicted RBP10.46□□□□□ -0.73
SYNPO-205ENST00000522122 SMAD5-AS1Q9Y6J3 95 aa10.46□□□□□ -0.73
SYNPO-205ENST00000522122 DSCAMO60469 2012 aa10.46□□□□□ -0.73
SYNPO-205ENST00000522122 B5MCH6 92 aa10.46□□□□□ -0.74
SYNPO-205ENST00000522122 RS1O15537 224 aa10.46□□□□□ -0.74
SYNPO-205ENST00000522122 TMEM126AQ9H061 195 aa10.46□□□□□ -0.74
SYNPO-205ENST00000522122 IGHV1-58A0A0C4DH39 117 aa10.45□□□□□ -0.74
SYNPO-205ENST00000522122 EBI3Q14213 229 aa10.45□□□□□ -0.74
SYNPO-205ENST00000522122 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
SYNPO-205ENST00000522122 COX7B2Q8TF08 81 aa10.45□□□□□ -0.74
SYNPO-205ENST00000522122 HIST2H2BCQ6DN03 193 aa10.44□□□□□ -0.74
SYNPO-205ENST00000522122 NDUFA11Q86Y39 141 aa10.44□□□□□ -0.74
SYNPO-205ENST00000522122 IGF1P05019 195 aa10.44□□□□□ -0.74
SYNPO-205ENST00000522122 MRPS12O15235 138 aaKnown RBP10.44□□□□□ -0.74
SYNPO-205ENST00000522122 CDK2AP2O75956 126 aa10.44□□□□□ -0.74
SYNPO-205ENST00000522122 IGKV2D-26A0A0A0MRZ7 120 aa10.43□□□□□ -0.74
SYNPO-205ENST00000522122 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
SYNPO-205ENST00000522122 TRACP01848 142 aa10.43□□□□□ -0.74
SYNPO-205ENST00000522122 ABCA2Q9BZC7 2435 aa10.43□□□□□ -0.74
SYNPO-205ENST00000522122 RBMY1FQ15415 496 aaKnown RBP10.43□□□□□ -0.74
SYNPO-205ENST00000522122 PTH2Q96A98 100 aa10.43□□□□□ -0.74
SYNPO-205ENST00000522122 ZFAND3Q9H8U3 227 aa10.43□□□□□ -0.74
SYNPO-205ENST00000522122 H3BT86 120 aa10.43□□□□□ -0.74
SYNPO-205ENST00000522122 IGLV10-54A0A075B6I4 117 aa10.42□□□□□ -0.74
SYNPO-205ENST00000522122 COX7A2LO14548 114 aa10.42□□□□□ -0.74
SYNPO-205ENST00000522122 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
SYNPO-205ENST00000522122 NEXN-AS1Q8NBZ9 246 aa10.41□□□□□ -0.74
SYNPO-205ENST00000522122 LGALS9O00182 355 aa10.41□□□□□ -0.74
SYNPO-205ENST00000522122 SPANXB1Q9NS25 103 aaPredicted RBP10.41□□□□□ -0.74
SYNPO-205ENST00000522122 CEMP1Q6PRD7 247 aaPredicted RBP10.41□□□□□ -0.74
SYNPO-205ENST00000522122 PRB1P04280 392 aa10.41□□□□□ -0.74
SYNPO-205ENST00000522122 ATP5G1P05496 136 aa10.41□□□□□ -0.74
SYNPO-205ENST00000522122 CNFNQ9BYD5 112 aa10.41□□□□□ -0.74
SYNPO-205ENST00000522122 TRBV10-1A0A0K0K1A3 114 aa10.4□□□□□ -0.74
SYNPO-205ENST00000522122 RMI2Q96E14 147 aa10.4□□□□□ -0.74
SYNPO-205ENST00000522122 ODF3Q96PU9 254 aa10.4□□□□□ -0.74
SYNPO-205ENST00000522122 UFSP1Q6NVU6 142 aa10.4□□□□□ -0.74
SYNPO-205ENST00000522122 CLEC2BQ92478 149 aa10.4□□□□□ -0.74
SYNPO-205ENST00000522122 C9orf66Q5T8R8 295 aa10.4□□□□□ -0.75
SYNPO-205ENST00000522122 C4orf3Q8WVX3 66 aa10.4□□□□□ -0.75
SYNPO-205ENST00000522122 RAI1Q7Z5J4 1906 aaPredicted RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms