RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CCL18P55774 89 aa12.4□□□□□ -0.42
USP42-207ENST00000521713 C9orf47Q6ZRZ4 202 aa12.4□□□□□ -0.42
USP42-207ENST00000521713 JMJD7-PLA2G4BH0Y9G9 81 aa12.39□□□□□ -0.43
USP42-207ENST00000521713 TMEM61Q8N0U2 210 aa12.39□□□□□ -0.43
USP42-207ENST00000521713 NKAPP1Q8N9T2 125 aa12.39□□□□□ -0.43
USP42-207ENST00000521713 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
USP42-207ENST00000521713 RBX1P62877 108 aa12.39□□□□□ -0.43
USP42-207ENST00000521713 A0A1B0GXF2 115 aa12.39□□□□□ -0.43
USP42-207ENST00000521713 GATA1P15976 413 aaPredicted RBP12.39□□□□□ -0.43
USP42-207ENST00000521713 PSMB8P28062 276 aa12.39□□□□□ -0.43
USP42-207ENST00000521713 TNCP24821 2201 aa12.39□□□□□ -0.43
USP42-207ENST00000521713 hADV29S1A0JD25 119 aa12.39□□□□□ -0.43
USP42-207ENST00000521713 YPEL4Q96NS1 127 aa12.38□□□□□ -0.43
USP42-207ENST00000521713 CHD3Q12873 2000 aaKnown RBP12.38□□□□□ -0.43
USP42-207ENST00000521713 C19orf71A6NCJ1 209 aa12.38□□□□□ -0.43
USP42-207ENST00000521713 NXPH4O95158 308 aa12.38□□□□□ -0.43
USP42-207ENST00000521713 IGKV1OR2-108A0A075B7D4 117 aa12.37□□□□□ -0.43
USP42-207ENST00000521713 INAFM1C9JVW0 142 aa12.37□□□□□ -0.43
USP42-207ENST00000521713 PROP1O75360 226 aa12.37□□□□□ -0.43
USP42-207ENST00000521713 EBI3Q14213 229 aa12.37□□□□□ -0.43
USP42-207ENST00000521713 MRPL36Q9P0J6 103 aaKnown RBP12.37□□□□□ -0.43
USP42-207ENST00000521713 NDUFV3P56181 108 aaKnown RBP12.36□□□□□ -0.43
USP42-207ENST00000521713 IGKV2D-24A0A075B6R9 120 aa12.36□□□□□ -0.43
USP42-207ENST00000521713 GYPEP15421 78 aa12.36□□□□□ -0.43
USP42-207ENST00000521713 BAALCQ8WXS3 180 aa12.36□□□□□ -0.43
USP42-207ENST00000521713 PKIGQ9Y2B9 76 aa12.36□□□□□ -0.43
USP42-207ENST00000521713 P0C879 139 aa12.36□□□□□ -0.43
USP42-207ENST00000521713 UNQ9165/PRO28630Q6UXU0 137 aa12.36□□□□□ -0.43
USP42-207ENST00000521713 RNF183Q96D59 192 aa12.36□□□□□ -0.43
USP42-207ENST00000521713 ABCA2Q9BZC7 2435 aa12.36□□□□□ -0.43
USP42-207ENST00000521713 LGALS9O00182 355 aa12.35□□□□□ -0.43
USP42-207ENST00000521713 TM2D2Q9BX73 214 aa12.35□□□□□ -0.43
USP42-207ENST00000521713 K7EQD1 137 aa12.35□□□□□ -0.43
USP42-207ENST00000521713 UQCRQO14949 82 aa12.34□□□□□ -0.43
USP42-207ENST00000521713 DAZ2Q13117 558 aaKnown RBP12.34□□□□□ -0.43
USP42-207ENST00000521713 DAZ4Q86SG3 579 aaKnown RBP12.34□□□□□ -0.43
USP42-207ENST00000521713 DAZ3Q9NR90 486 aaKnown RBP12.34□□□□□ -0.43
USP42-207ENST00000521713 SPANXB1Q9NS25 103 aaPredicted RBP12.34□□□□□ -0.43
USP42-207ENST00000521713 TRBV12-3P01733 135 aa12.34□□□□□ -0.43
USP42-207ENST00000521713 PLA2G2AP14555 144 aa12.34□□□□□ -0.43
USP42-207ENST00000521713 RPL39LQ96EH5 51 aaKnown RBP12.34□□□□□ -0.43
USP42-207ENST00000521713 A0A0J9YXV3 536 aa12.34□□□□□ -0.43
USP42-207ENST00000521713 PRAC2D3DTV9 90 aa12.34□□□□□ -0.43
USP42-207ENST00000521713 RS1O15537 224 aa12.34□□□□□ -0.43
USP42-207ENST00000521713 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
USP42-207ENST00000521713 A0A0J9YX75 114 aa12.33□□□□□ -0.43
USP42-207ENST00000521713 DEFB135Q30KP9 77 aa12.33□□□□□ -0.43
USP42-207ENST00000521713 TTTY13Q9BZ97 58 aa12.33□□□□□ -0.43
USP42-207ENST00000521713 Q8N1Y9 231 aa12.33□□□□□ -0.44
USP42-207ENST00000521713 MSRB1Q9NZV6 116 aa12.33□□□□□ -0.44
USP42-207ENST00000521713 TNRC6AQ8NDV7 1962 aaKnown RBP12.33□□□□□ -0.44
USP42-207ENST00000521713 SHISA2Q6UWI4 295 aa12.33□□□□□ -0.44
USP42-207ENST00000521713 CCDC140Q96MF4 163 aa12.33□□□□□ -0.44
USP42-207ENST00000521713 KMT2EQ8IZD2 1858 aa12.32□□□□□ -0.44
USP42-207ENST00000521713 HIST2H2BCQ6DN03 193 aa12.32□□□□□ -0.44
USP42-207ENST00000521713 IGKV3D-7A0A0C4DH55 119 aa12.32□□□□□ -0.44
USP42-207ENST00000521713 LINC01548A6NM66 108 aa12.32□□□□□ -0.44
USP42-207ENST00000521713 OPRPNQ99935 248 aaPredicted RBP12.32□□□□□ -0.44
USP42-207ENST00000521713 LY6LH3BQJ8 138 aa12.31□□□□□ -0.44
USP42-207ENST00000521713 CLPSL2Q6UWE3 100 aa12.31□□□□□ -0.44
USP42-207ENST00000521713 IL17DQ8TAD2 202 aa12.31□□□□□ -0.44
USP42-207ENST00000521713 CRYGBP07316 175 aa12.31□□□□□ -0.44
USP42-207ENST00000521713 FUSP35637 526 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP42-207ENST00000521713 C5orf47Q569G3 176 aa12.31□□□□□ -0.44
USP42-207ENST00000521713 PTPRSQ13332 1948 aa12.31□□□□□ -0.44
USP42-207ENST00000521713 XCL1P47992 114 aa12.31□□□□□ -0.44
USP42-207ENST00000521713 RNASE13Q5GAN3 156 aaKnown RBP12.31□□□□□ -0.44
USP42-207ENST00000521713 CRIP3Q6Q6R5 217 aa12.31□□□□□ -0.44
USP42-207ENST00000521713 Q6ZQT7 251 aa12.31□□□□□ -0.44
USP42-207ENST00000521713 KLK5Q9Y337 293 aaPredicted RBP12.31□□□□□ -0.44
USP42-207ENST00000521713 FRMD6-AS1P0C7T7 363 aa12.3□□□□□ -0.44
USP42-207ENST00000521713 PDE6GP18545 87 aa12.3□□□□□ -0.44
USP42-207ENST00000521713 Q6ZSV7 163 aa12.3□□□□□ -0.44
USP42-207ENST00000521713 Q9HAA7 133 aa12.3□□□□□ -0.44
USP42-207ENST00000521713 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.3□□□□□ -0.44
USP42-207ENST00000521713 IGKV2-29A2NJV5 120 aaPredicted RBP12.3□□□□□ -0.44
USP42-207ENST00000521713 ZNF503Q96F45 646 aa12.3□□□□□ -0.44
USP42-207ENST00000521713 MAP6D1Q9H9H5 199 aa12.3□□□□□ -0.44
USP42-207ENST00000521713 ALPK3Q96L96 1907 aa12.3□□□□□ -0.44
USP42-207ENST00000521713 SPRY2O43597 315 aa12.29□□□□□ -0.44
USP42-207ENST00000521713 PCNX3Q9H6A9 2034 aa12.29□□□□□ -0.44
USP42-207ENST00000521713 MYO9AB2RTY4 2548 aa12.29□□□□□ -0.44
USP42-207ENST00000521713 LY6G6DO95868 133 aa12.29□□□□□ -0.44
USP42-207ENST00000521713 TCL1BO95988 128 aa12.29□□□□□ -0.44
USP42-207ENST00000521713 BRWD1-AS2P59051 145 aa12.29□□□□□ -0.44
USP42-207ENST00000521713 HHLA3Q9XRX5 114 aa12.29□□□□□ -0.44
USP42-207ENST00000521713 IGKV1D-37A0A075B6S9 117 aa12.29□□□□□ -0.44
USP42-207ENST00000521713 TMEM263Q8WUH6 116 aaKnown RBP12.29□□□□□ -0.44
USP42-207ENST00000521713 SPATA25Q9BR10 227 aa12.28□□□□□ -0.44
USP42-207ENST00000521713 MT-ATP8P03928 68 aa12.28□□□□□ -0.44
USP42-207ENST00000521713 Q6ZPA2 131 aa12.28□□□□□ -0.44
USP42-207ENST00000521713 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
USP42-207ENST00000521713 IGLV2-8P01709 118 aa12.27□□□□□ -0.44
USP42-207ENST00000521713 PTH2Q96A98 100 aa12.27□□□□□ -0.44
USP42-207ENST00000521713 CEP295Q9C0D2 2601 aa12.27□□□□□ -0.45
USP42-207ENST00000521713 NUP210LQ5VU65 1888 aa12.27□□□□□ -0.45
USP42-207ENST00000521713 IGHV1-58A0A0C4DH39 117 aa12.27□□□□□ -0.45
USP42-207ENST00000521713 MP68P56378 58 aa12.27□□□□□ -0.45
USP42-207ENST00000521713 TRBV7-3A0A075B6L6 115 aa12.27□□□□□ -0.45
USP42-207ENST00000521713 TRAV4A0A0B4J268 109 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms