RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 CTAG1AP78358 180 aa9.67□□□□□ -0.86
PRKDC-204ENST00000521331 LINC00518Q8N0U6 118 aa9.67□□□□□ -0.86
PRKDC-204ENST00000521331 SVBPQ8N300 66 aa9.67□□□□□ -0.86
PRKDC-204ENST00000521331 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.67□□□□□ -0.86
PRKDC-204ENST00000521331 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
PRKDC-204ENST00000521331 FAM74A7A6NL05 159 aa9.66□□□□□ -0.86
PRKDC-204ENST00000521331 RPL37AP61513 92 aaKnown RBP9.66□□□□□ -0.86
PRKDC-204ENST00000521331 LINC01559Q495D7 138 aa9.66□□□□□ -0.86
PRKDC-204ENST00000521331 OR10G8Q8NGN5 311 aa9.66□□□□□ -0.86
PRKDC-204ENST00000521331 FMC1Q96HJ9 113 aa9.66□□□□□ -0.86
PRKDC-204ENST00000521331 ZNF471Q9BX82 626 aaPredicted RBP9.66□□□□□ -0.86
PRKDC-204ENST00000521331 SEC11CQ9BY50 192 aa9.66□□□□□ -0.86
PRKDC-204ENST00000521331 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
PRKDC-204ENST00000521331 TRBV6-8A0A0A6YYG3 113 aa9.65□□□□□ -0.86
PRKDC-204ENST00000521331 PKIAP61925 76 aa9.65□□□□□ -0.86
PRKDC-204ENST00000521331 UBE2G1P62253 170 aa9.65□□□□□ -0.86
PRKDC-204ENST00000521331 EIF5AP63241 154 aaKnown RBP9.65□□□□□ -0.86
PRKDC-204ENST00000521331 ZNF726P1Q15940 193 aa9.65□□□□□ -0.86
PRKDC-204ENST00000521331 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
PRKDC-204ENST00000521331 FAM74A3Q4VXF1 159 aa9.65□□□□□ -0.86
PRKDC-204ENST00000521331 ENHOQ6UWT2 76 aa9.65□□□□□ -0.86
PRKDC-204ENST00000521331 TMSB15BA0A087X1C1 80 aa9.64□□□□□ -0.87
PRKDC-204ENST00000521331 BORCS7-ASMTA0A0B4J1R7 106 aa9.64□□□□□ -0.87
PRKDC-204ENST00000521331 RPL7L1Q6DKI1 246 aaKnown RBP9.64□□□□□ -0.87
PRKDC-204ENST00000521331 C15orf54Q8N8G6 183 aa9.64□□□□□ -0.87
PRKDC-204ENST00000521331 LYPD6BQ8NI32 183 aa9.64□□□□□ -0.87
PRKDC-204ENST00000521331 TCEAL7Q9BRU2 100 aa9.64□□□□□ -0.87
PRKDC-204ENST00000521331 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
PRKDC-204ENST00000521331 ANGP03950 147 aaKnown RBP9.63□□□□□ -0.87
PRKDC-204ENST00000521331 ADCYAP1P18509 176 aa9.63□□□□□ -0.87
PRKDC-204ENST00000521331 RAB4BP61018 213 aa9.63□□□□□ -0.87
PRKDC-204ENST00000521331 DGAT2L7PQ6IED9 249 aa9.63□□□□□ -0.87
PRKDC-204ENST00000521331 EIF5AL1Q6IS14 154 aaKnown RBP9.63□□□□□ -0.87
PRKDC-204ENST00000521331 USP17L23D6RBM5 183 aa9.62□□□□□ -0.87
PRKDC-204ENST00000521331 LTAP01374 205 aa9.62□□□□□ -0.87
PRKDC-204ENST00000521331 S100A12P80511 92 aa9.62□□□□□ -0.87
PRKDC-204ENST00000521331 MIAQ16674 131 aa9.62□□□□□ -0.87
PRKDC-204ENST00000521331 MPV17L2Q567V2 206 aa9.62□□□□□ -0.87
PRKDC-204ENST00000521331 AKR1C8PQ5T2L2 129 aa9.62□□□□□ -0.87
PRKDC-204ENST00000521331 SNAPINO95295 136 aa9.61□□□□□ -0.87
PRKDC-204ENST00000521331 HLA-DQA1P01909 254 aa9.61□□□□□ -0.87
PRKDC-204ENST00000521331 FHITP49789 147 aa9.61□□□□□ -0.87
PRKDC-204ENST00000521331 ZNF56Q15929 161 aa9.61□□□□□ -0.87
PRKDC-204ENST00000521331 PRR27Q6MZM9 219 aa9.61□□□□□ -0.87
PRKDC-204ENST00000521331 NEXN-AS1Q8NBZ9 246 aa9.61□□□□□ -0.87
PRKDC-204ENST00000521331 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
PRKDC-204ENST00000521331 PRSS1P07477 247 aa9.6□□□□□ -0.87
PRKDC-204ENST00000521331 SULT1A2P50226 295 aa9.6□□□□□ -0.87
PRKDC-204ENST00000521331 BLOC1S1P78537 153 aa9.6□□□□□ -0.87
PRKDC-204ENST00000521331 TMEM97Q5BJF2 176 aa9.6□□□□□ -0.87
PRKDC-204ENST00000521331 C9orf163Q8N9P6 203 aa9.6□□□□□ -0.87
PRKDC-204ENST00000521331 MAP1LC3B2A6NCE7 125 aa9.59□□□□□ -0.87
PRKDC-204ENST00000521331 RPL19P84098 196 aaKnown RBP9.59□□□□□ -0.87
PRKDC-204ENST00000521331 DAZAP1Q96EP5 407 aaKnown RBP9.59□□□□□ -0.87
PRKDC-204ENST00000521331 MAP1LC3BQ9GZQ8 125 aa9.59□□□□□ -0.87
PRKDC-204ENST00000521331 CXCL1P09341 107 aa9.58□□□□□ -0.88
PRKDC-204ENST00000521331 AKR1C3P42330 323 aa9.58□□□□□ -0.88
PRKDC-204ENST00000521331 HNRNPA3P51991 378 aaKnown RBP9.58□□□□□ -0.88
PRKDC-204ENST00000521331 CST9LP1Q5W188 147 aa9.58□□□□□ -0.88
PRKDC-204ENST00000521331 OR10AG1Q8NH19 301 aa9.58□□□□□ -0.88
PRKDC-204ENST00000521331 BIN3Q9NQY0 253 aa9.58□□□□□ -0.88
PRKDC-204ENST00000521331 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
PRKDC-204ENST00000521331 VAX2Q9UIW0 290 aa9.58□□□□□ -0.88
PRKDC-204ENST00000521331 UBR4Q5T4S7 5183 aa9.57□□□□□ -0.88
PRKDC-204ENST00000521331 F8W036 122 aa9.57□□□□□ -0.88
PRKDC-204ENST00000521331 SNAI2O43623 268 aa9.56□□□□□ -0.88
PRKDC-204ENST00000521331 S100A9P06702 114 aaKnown RBP9.56□□□□□ -0.88
PRKDC-204ENST00000521331 RBX1P62877 108 aa9.56□□□□□ -0.88
PRKDC-204ENST00000521331 SRSF3P84103 164 aaKnown RBP9.56□□□□□ -0.88
PRKDC-204ENST00000521331 SPANXN1Q5VSR9 72 aa9.56□□□□□ -0.88
PRKDC-204ENST00000521331 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
PRKDC-204ENST00000521331 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 TRBV25-1A0A075B6N4 114 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 COLCA2A8K830 154 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 F5H697 171 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 OR5AL1P0C617 328 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 KRTAP26-1Q6PEX3 210 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 NTM-AS1Q6ZSK4 140 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 DERL1Q9BUN8 251 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 SSBP4Q9BWG4 385 aaPredicted RBP9.55□□□□□ -0.88
PRKDC-204ENST00000521331 SMDT1Q9H4I9 107 aa9.55□□□□□ -0.88
PRKDC-204ENST00000521331 SMIM17P0DL12 118 aa9.54□□□□□ -0.88
PRKDC-204ENST00000521331 RAB5CP51148 216 aa9.54□□□□□ -0.88
PRKDC-204ENST00000521331 GAGE6Q13070 117 aa9.54□□□□□ -0.88
PRKDC-204ENST00000521331 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
PRKDC-204ENST00000521331 Q6ZRU5 148 aa9.54□□□□□ -0.88
PRKDC-204ENST00000521331 SMCO4Q9NRQ5 59 aa9.54□□□□□ -0.88
PRKDC-204ENST00000521331 PANO1I0J062 215 aa9.53□□□□□ -0.88
PRKDC-204ENST00000521331 PAGE4O60829 102 aa9.53□□□□□ -0.88
PRKDC-204ENST00000521331 CNBPP62633 177 aaKnown RBP9.53□□□□□ -0.88
PRKDC-204ENST00000521331 CIRBPQ14011 172 aaKnown RBP9.53□□□□□ -0.88
PRKDC-204ENST00000521331 CBLN2Q8IUK8 224 aa9.53□□□□□ -0.88
PRKDC-204ENST00000521331 AP1S3Q96PC3 154 aa9.53□□□□□ -0.88
PRKDC-204ENST00000521331 MUC21A0A0G2JKD1 596 aa9.52□□□□□ -0.89
PRKDC-204ENST00000521331 MUC21A0A140T8X8 626 aa9.52□□□□□ -0.89
PRKDC-204ENST00000521331 MT1HL1P0DM35 61 aa9.52□□□□□ -0.89
PRKDC-204ENST00000521331 IQCJQ1A5X6 159 aa9.52□□□□□ -0.89
PRKDC-204ENST00000521331 BAGE2Q86Y30 109 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms