RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 DAZ4Q86SG3 579 aaKnown RBP4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 RNF185Q96GF1 192 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 UPK3BQ9BT76 320 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 GNB1LQ9BYB4 327 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 DAZ3Q9NR90 486 aaKnown RBP4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 SMCO4Q9NRQ5 59 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 LAMTOR2Q9Y2Q5 125 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 DNAH7Q8WXX0 4024 aa4.42□□□□□ -1.7
IGHV4-55-201ENST00000520889 IGHV3-73A0A0B4J1V6 119 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 PRSS47A8MTI9 375 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 K7EP13 123 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 MGPP08493 103 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 CAMPP49913 170 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 RPL32P62910 135 aaKnown RBP4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 ELOBQ15370 118 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 MRPL54Q6P161 138 aaKnown RBP4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 LYPD5Q6UWN5 251 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 NEXN-AS1Q8NBZ9 246 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 ATP6V0E2Q8NHE4 81 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 GTSF1LQ9H1H1 148 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 MRPS16Q9Y3D3 137 aaKnown RBP4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
IGHV4-55-201ENST00000520889 TENM2Q9NT68 2774 aa4.4□□□□□ -1.7
IGHV4-55-201ENST00000520889 DYNC2H1Q8NCM8 4307 aaKnown RBP4.4□□□□□ -1.7
IGHV4-55-201ENST00000520889 TCAPO15273 167 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 NCR2O95944 276 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 NUDT3O95989 172 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 BTF3P20290 206 aaKnown RBP4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 SSTP61278 116 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 MRPL51Q4U2R6 128 aaKnown RBP4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 TMEM136Q6ZRR5 245 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 AMN1Q8IY45 258 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 ZNRF2Q8NHG8 242 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 LINC00476Q8WZB0 136 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 YPEL4Q96NS1 127 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 C20orf78Q9BR46 151 aa4.4□□□□□ -1.71
IGHV4-55-201ENST00000520889 CSMD3Q7Z407 3707 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 TRBV27A0A0K0K1C4 114 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 GAGE12JA6NER3 117 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 K7EMI3 77 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 CKS2P33552 79 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 POLR2KP53803 58 aaKnown RBP4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 PKIAP61925 76 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 GAGE1Q13065 139 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 GAGE4Q13068 117 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 GAGE5Q13069 117 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 ESRGQ1W209 222 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 GAGE13Q4V321 117 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 OR10J3Q5JRS4 329 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 LELP1Q5T871 98 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 ATRAIDQ6UW56 229 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 ORMDL3Q8N138 153 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 CHCHD7Q9BUK0 85 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 URGCP-MRPS24S4R325 110 aa4.39□□□□□ -1.71
IGHV4-55-201ENST00000520889 STARD9Q9P2P6 4700 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 TRAV8-6A0A0B4J262 113 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 LOC100131303A0A0U1RQF7 123 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 LCE6AA0A183 80 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 SDHAF1A6NFY7 115 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 H7C423 109 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 I3L3M4 83 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 VCYO14598 125 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 SUMO2P61956 95 aaKnown RBP4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 IQCJQ1A5X6 159 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 NRACQ8N912 160 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 TMEM70Q9BUB7 260 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 ST20Q9HBF5 79 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 LINC00588Q9Y4M8 146 aa4.38□□□□□ -1.71
IGHV4-55-201ENST00000520889 TRBV6-8A0A0A6YYG3 113 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 TGIF2-C20orf24A0A0A6YYL0 155 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 TRAV26-2A0A0B4J265 109 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 D6R8Y8 96 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 ATP6V1G1O75348 118 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 TNFRSF6BO95407 300 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 APCSP02743 223 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 COTL1Q14019 142 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 UBE2DNLQ8IWF7 75 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 RPL39LQ96EH5 51 aaKnown RBP4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 PRELID3AQ96N28 172 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 Q9UF83 564 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 TRAPPC1Q9Y5R8 145 aa4.37□□□□□ -1.71
IGHV4-55-201ENST00000520889 PLECQ15149 4684 aaKnown RBP4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 TRBV25-1A0A075B6N4 114 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 IGHV1-24A0A0C4DH33 117 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 COLCA2A8K830 154 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 SIVA1O15304 175 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 DNAH10OSP0CZ25 163 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 RPS10P46783 165 aaKnown RBP4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 SMAGPQ0VAQ4 97 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 TTC32Q5I0X7 151 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 LINC01556Q5JQF7 62 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 CBLN2Q8IUK8 224 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 C10orf126Q8N4M7 172 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 KIR2DL4Q99706 377 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 SMIM2Q9BVW6 85 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 MRPL18Q9H0U6 180 aaKnown RBP4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 MAP1LC3AQ9H492 121 aa4.36□□□□□ -1.71
IGHV4-55-201ENST00000520889 Q9H8V8 135 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms