RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	PFN1	P07737	140 aa	Known RBP	4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228		P0DMU3	169 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	FAM231A	P0DMU4	169 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	FAM231C	P0DMU5	169 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	SULT1A2	P50226	295 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	ZNF80	P51504	273 aa	Predicted RBP	4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	UBE2G1	P62253	170 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	CCL20	P78556	96 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	C2orf66	Q6UXQ4	117 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228		Q86TA4	180 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	C15orf53	Q8NAA6	179 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	FMC1	Q96HJ9	113 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	C18orf15	Q96N68	181 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	MRPL16	Q9NX20	251 aa	Known RBP	4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	GNG13	Q9P2W3	67 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	ZFP30	Q9Y2G7	519 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	KIF25-AS1	Q9Y6Z4	181 aa		4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	EPPK1	P58107	5090 aa	Known RBP	4.68	□□□□□ -1.66
SDCBP-208	ENST00000520228	TRAV26-1	A0A087WT03	109 aa		4.67	□□□□□ -1.66
SDCBP-208	ENST00000520228		A0A0J9YY99	117 aa		4.67	□□□□□ -1.66
SDCBP-208	ENST00000520228	TRBV6-1	A0A0K0K1D8	114 aa		4.67	□□□□□ -1.66
SDCBP-208	ENST00000520228	FABP5P3	A8MUU1	101 aa		4.67	□□□□□ -1.66
SDCBP-208	ENST00000520228	S100A9	P06702	114 aa	Known RBP	4.67	□□□□□ -1.66
SDCBP-208	ENST00000520228	AKR1C3	P42330	323 aa		4.67	□□□□□ -1.66
SDCBP-208	ENST00000520228	UBE2DNL	Q8IWF7	75 aa		4.67	□□□□□ -1.66
SDCBP-208	ENST00000520228	MANBAL	Q9NQG1	85 aa		4.67	□□□□□ -1.66
SDCBP-208	ENST00000520228	BIRC6	Q9NR09	4857 aa		4.67	□□□□□ -1.66
SDCBP-208	ENST00000520228	PLEC	Q15149	4684 aa	Known RBP	4.66	□□□□□ -1.66
SDCBP-208	ENST00000520228		H3BNG1	76 aa		4.66	□□□□□ -1.66
SDCBP-208	ENST00000520228		M0R2P5	195 aa		4.66	□□□□□ -1.66
SDCBP-208	ENST00000520228	LTA	P01374	205 aa		4.66	□□□□□ -1.66
SDCBP-208	ENST00000520228	IGHV3-53	P01767	116 aa		4.66	□□□□□ -1.66
SDCBP-208	ENST00000520228	ORM1	P02763	201 aa		4.66	□□□□□ -1.66
SDCBP-208	ENST00000520228	TYMS	P04818	313 aa		4.66	□□□□□ -1.66
SDCBP-208	ENST00000520228	NKX2-5	P52952	324 aa	Predicted RBP	4.66	□□□□□ -1.66
SDCBP-208	ENST00000520228	FAM162B	Q5T6X4	162 aa		4.66	□□□□□ -1.66
SDCBP-208	ENST00000520228	DNAH1	Q9P2D7	4330 aa		4.65	□□□□□ -1.66
SDCBP-208	ENST00000520228	SACS	Q9NZJ4	4579 aa		4.65	□□□□□ -1.66
SDCBP-208	ENST00000520228	TRGV4	A0A0C4DH28	118 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228		A8MU10	97 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228		B4DEV8	164 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228		C9JCJ5	164 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	SH2D1A	O60880	128 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	IFNA1	P01562	189 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	S100A4	P26447	101 aa	Known RBP	4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	ASIP	P42127	132 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	CRIP1	P50238	77 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	CCL18	P55774	89 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	SLA	Q13239	276 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	ALKAL2	Q6UX46	152 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	SH2D6	Q7Z4S9	175 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	BAGE2	Q86Y30	109 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	ZC2HC1A	Q96GY0	325 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	VSIG2	Q96IQ7	327 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	TXNDC17	Q9BRA2	123 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	HHLA3	Q9XRX5	114 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	ALMS1	Q8TCU4	4167 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	LYST	Q99698	3801 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	RYR2	Q92736	4967 aa		4.65	□□□□□ -1.67
SDCBP-208	ENST00000520228	TRAV4	A0A0B4J268	109 aa		4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228	KRBOX1	C9JBD0	128 aa		4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228		M0R036	132 aa		4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228	PDE6D	O43924	150 aa		4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228	SFTA3	P0C7M3	94 aa		4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228	RPL35	P42766	123 aa	Known RBP	4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228	MEF2B	Q02080	365 aa	Predicted RBP	4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228	OR4C5	Q8NGB2	326 aa		4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228	PRO0255	Q9UI72	69 aa		4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228	VAX2	Q9UIW0	290 aa		4.64	□□□□□ -1.67
SDCBP-208	ENST00000520228	TMSB15B	A0A087X1C1	80 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	GRIFIN	A4D1Z8	144 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228		M0R2N4	97 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	BCL2	P10415	239 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	RNASE3	P12724	160 aa	Known RBP	4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	TAGLN2	P37802	199 aa	Known RBP	4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	CRYBA4	P53673	196 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	PTH2	Q96A98	100 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	DERL1	Q9BUN8	251 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	MED9	Q9NWA0	146 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	LINC00588	Q9Y4M8	146 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	ICOS	Q9Y6W8	199 aa		4.63	□□□□□ -1.67
SDCBP-208	ENST00000520228	IGLV2-18	A0A075B6J9	118 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228		A0A096LPF7	62 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228		H3BVH4	76 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	RS1	O15537	224 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	ARMS2	P0C7Q2	107 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	DNAH10OS	P0CZ25	163 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	MRPL23	Q16540	153 aa	Known RBP	4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	ESRG	Q1W209	222 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	CENPW	Q5EE01	88 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	DNLZ	Q5SXM8	178 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	CFAP126	Q5VTH2	177 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	ZNRF2	Q8NHG8	242 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	IL36B	Q9NZH7	164 aa		4.62	□□□□□ -1.67
SDCBP-208	ENST00000520228	IGHV3-73	A0A0B4J1V6	119 aa		4.61	□□□□□ -1.67
SDCBP-208	ENST00000520228	RAB19	A4D1S5	217 aa		4.61	□□□□□ -1.67
SDCBP-208	ENST00000520228	RBFOX3	A6NFN3	312 aa		4.61	□□□□□ -1.67
SDCBP-208	ENST00000520228		A8MWV9	139 aa		4.61	□□□□□ -1.67
SDCBP-208	ENST00000520228	MGST1	P10620	155 aa	Known RBP	4.61	□□□□□ -1.67
SDCBP-208	ENST00000520228	SRI	P30626	198 aa		4.61	□□□□□ -1.67

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