RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 BAP18Q8IXM2 172 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 LINC00337Q8N6G1 96 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 ZNRF2Q8NHG8 242 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 SFT2D1Q8WV19 159 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 PHYHIPLQ96FC7 376 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 HIST1H4GQ99525 98 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 Q9H3A6 140 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 SORL1Q92673 2214 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 IGKV2-40A0A087WW87 121 aaPredicted RBP1.96□□□□□ -2.1
SKP1-204ENST00000517691 IGHV3OR16-9A0A0B4J2B5 98 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 CTXND1A0A1B0GTU2 59 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 UMAD1C9J7I0 102 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 ZNF253O75346 499 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 INSP01308 110 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 IFNA7P01567 189 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 IGKV2D-40P01614 121 aaPredicted RBP1.96□□□□□ -2.1
SKP1-204ENST00000517691 AMBPP02760 352 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 SLC25A5P05141 298 aaKnown RBP1.96□□□□□ -2.1
SKP1-204ENST00000517691 GIG44P09565 113 aaPredicted RBP1.96□□□□□ -2.1
SKP1-204ENST00000517691 SEC11BP0C7V7 166 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 RNASE4P34096 147 aaKnown RBP1.96□□□□□ -2.1
SKP1-204ENST00000517691 ZNF138P52744 262 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 RPS20P60866 119 aaKnown RBP1.96□□□□□ -2.1
SKP1-204ENST00000517691 KIAA0087Q14695 138 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 RBMY1FQ15415 496 aaKnown RBP1.96□□□□□ -2.1
SKP1-204ENST00000517691 C6orf99Q4VX62 202 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 FAM222AQ5U5X8 452 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 GOLT1AQ6ZVE7 132 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 FAM19A3Q7Z5A8 133 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 LYPD1Q8N2G4 141 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 RXFP4Q8TDU9 374 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 VGLL1Q99990 258 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 OTORQ9NRC9 128 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 TMEM167BQ9NRX6 74 aa1.96□□□□□ -2.1
SKP1-204ENST00000517691 A0A087WX48 190 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 TRAV12-3A0A0B4J271 114 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 ZNF705GA8MUZ8 300 aaPredicted RBP1.95□□□□□ -2.1
SKP1-204ENST00000517691 PRM2P04554 102 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 GPX1P07203 203 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 MIFP14174 115 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 CENPWQ5EE01 88 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 ZFAND6Q6FIF0 208 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 AMTNQ6UX39 209 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 DPPA3Q6W0C5 159 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 ATP5L2Q7Z4Y8 100 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 PRNTQ86SH4 94 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 NFE4Q86UQ8 179 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 C9orf62Q8N4C0 152 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 CSNK1G2-AS1Q8NCQ2 148 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 Q8TAT8 98 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 MUC7Q8TAX7 377 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 BORCS7Q96B45 105 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 IGF2BP2-AS1Q96M15 143 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 KRTAP2-2Q9BYT5 123 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 AGPAT4-IT1Q9H0P7 198 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 TENM3Q9P273 2699 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 TRAV8-1A0A0A6YYK1 113 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 RBAKDNA6NC62 111 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 F6UZH7 168 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 ZNF25P17030 456 aaPredicted RBP1.95□□□□□ -2.1
SKP1-204ENST00000517691 RAB5CP51148 216 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 NANOS2P60321 138 aaKnown RBP1.95□□□□□ -2.1
SKP1-204ENST00000517691 RRN3P1Q2M238 152 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 GFI1BQ5VTD9 330 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 ALKAL2Q6UX46 152 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 SCGB1D4Q6XE38 83 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 C9orf47Q6ZRZ4 202 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 GNG13Q9P2W3 67 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 EPDR1Q9UM22 224 aa1.95□□□□□ -2.1
SKP1-204ENST00000517691 TRAV8-3A0A0A6YYJ7 113 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 C7orf71A4D174 169 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 TMEM189A5PLL7 270 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 A8MTW9 85 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 SMIM1B2RUZ4 78 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 GGTLC3B5MD39 225 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 C3orf84H3BNL1 204 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 H7BYZ3 331 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 TCRAP04437 139 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 SPART-AS1P0CW21 52 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 SMIM6P0DI80 62 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 DEFB130BP0DP73 79 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 DEFB130AP0DP74 79 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 HTN3P15516 51 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 AZU1P20160 251 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 CCL20P78556 96 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 BTN1A1Q13410 526 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 ZNF705AQ6ZN79 300 aaPredicted RBP1.94□□□□□ -2.1
SKP1-204ENST00000517691 ZNF767PQ75MW2 155 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 TMEM256Q8N2U0 113 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 Q8NAQ8 132 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 C5orf17Q8NAS9 161 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 MBD3L1Q8WWY6 194 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 C14orf144Q96I85 54 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 LINC00479Q96M42 142 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 ODF3Q96PU9 254 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 NDFIP1Q9BT67 221 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 TMEM243Q9BU79 118 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 NKX6-2Q9C056 277 aaPredicted RBP1.94□□□□□ -2.1
SKP1-204ENST00000517691 PARLQ9H300 379 aa1.94□□□□□ -2.1
SKP1-204ENST00000517691 C11orf68Q9H3H3 251 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms