RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 TSPAN13O95857 204 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 TCL1BO95988 128 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 INSP01308 110 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 IGKV3-20P01619 116 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 IGHV3-33P01772 117 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 BAALC-AS2P0C853 105 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 IGHV3-30-3P0DP02 117 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 RNASE3P12724 160 aaKnown RBP1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 COX6B1P14854 86 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 ADORA2A-AS1P86434 159 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 TCF15Q12870 199 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 SS18Q15532 418 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 LCE2CQ5TA81 110 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 BRD3OSQ6XYD6 125 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 Q6ZUT4 128 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 SBSPONQ8IVN8 264 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 TMEM86BQ8N661 226 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 OR13C6PQ8NH95 151 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 C10orf105Q8TEF2 133 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 PHLDA1Q8WV24 401 aaPredicted RBP1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 FAM19A4Q96LR4 140 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 C9orf85Q96MD7 179 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 LINC00467Q9BRT7 94 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 CDIP1Q9H305 208 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 EDA2RQ9HAV5 297 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 NDUFA12Q9UI09 145 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 LINC00527Q9UJ94 153 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 CSDC2Q9Y534 153 aaKnown RBP1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 ICOSQ9Y6W8 199 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 MUC4Q99102 2169 aa1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 TPRP12270 2363 aaKnown RBP1.55□□□□□ -2.16
RNU1-40P-201ENST00000516816 ROS1P08922 2347 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 ZDBF2Q9HCK1 2354 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 TRAV12-2A0A075B6T6 113 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 IGHV3OR16-10A0A075B7F0 116 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 TRAV8-3A0A0A6YYJ7 113 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 TRGV4A0A0C4DH28 118 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 A0A0J9YXV3 536 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 FAM240AA0A1B0GVK7 77 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 F6UB75 175 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 JMJD7-PLA2G4BH0Y9G9 81 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 SOCS3O14543 225 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 TRIAP1O43715 76 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 NXPH4O95158 308 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 IGHV3-53P01767 116 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 TRACP01848 142 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 CRYGDP07320 174 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 ZNF22P17026 224 aaPredicted RBP1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 CXCL5P42830 114 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 EMP1P54849 157 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 NDUFV3P56181 108 aaKnown RBP1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 SYNJ2BPP57105 145 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 LINC00158P58513 81 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 DEFB131AP59861 70 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 RPL39P62891 51 aaKnown RBP1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 BLCAPP62952 87 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 MRPS36P82909 103 aaKnown RBP1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 MIAQ16674 131 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 SPINK13Q1W4C9 94 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 PRR30Q53SZ7 412 aaPredicted RBP1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 SERTAD4-AS1Q5TG53 156 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 HIST2H2BCQ6DN03 193 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 HIST2H2BDQ6DRA6 164 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 UNQ9165/PRO28630Q6UXU0 137 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 Q6YL49 198 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 LINC00643Q86TS7 51 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 PRIMA1Q86XR5 153 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 C15orf53Q8NAA6 179 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 ZNRF2Q8NHG8 242 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 DCANP1Q8TF63 244 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 NTN5Q8WTR8 489 aaPredicted RBP1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 TMEM263Q8WUH6 116 aaKnown RBP1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 VSIG2Q96IQ7 327 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 C20orf173Q96LM9 149 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 LINC01600Q96MT4 127 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 AMELXQ99217 191 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 TTTY13Q9BZ97 58 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 PPDPFQ9H3Y8 114 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 PRORYQ9H606 182 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 C11orf21Q9P2W6 132 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 SELENOKQ9Y6D0 94 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 KIF25-AS1Q9Y6Z4 181 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 TRIOBPQ9H2D6 2365 aa1.54□□□□□ -2.16
RNU1-40P-201ENST00000516816 UTRNP46939 3433 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 IGLV4-69A0A075B6H9 119 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 IGLV4-3A0A075B6K6 122 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 IGHV3-64A0A075B6Q5 118 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 TRGV2A0A075B6R0 118 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 IGHV3OR16-12A0A075B7B8 117 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 A0A1B0GX51 115 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 F5H768 121 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 TMEM256-PLSCR3K7ERE1 68 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 COX7A2LO14548 114 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 UQCRQO14949 82 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 NDUFA1O15239 70 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 PAX4O43316 350 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 GAS8-AS1O95177 125 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 TSHBP01222 138 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 CRPP02741 224 aa1.53□□□□□ -2.16
RNU1-40P-201ENST00000516816 PRB4P10163 310 aaPredicted RBP1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms