RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 H7BZZ5 65 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 INE1O15225 51 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 PPYP01298 95 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 ACYP1P07311 99 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 NMBP08949 121 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 COX6CP09669 75 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 P0C880 135 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 PDE6GP18545 87 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 FAUP35544 74 aaKnown RBP0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 UBE2D1P51668 147 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SMIM11AP58511 58 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 LINC00315P59091 139 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 ELOF1P60002 83 aaKnown RBP0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 UBE2D3P61077 147 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SNRPFP62306 86 aaKnown RBP0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 UBE2D2P62837 147 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SSBP1Q04837 148 aaKnown RBP0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 KLKP1Q107X0 134 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 MOBPQ13875 183 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 ADIRFQ15847 76 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 TPRXLQ17RH7 258 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 KRTAP21-3Q3LHN1 58 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 FAM74A4Q5TZK3 123 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 XAF1Q6GPH4 301 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 CSAG1Q6PB30 78 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 LINC00322Q6ZN03 302 aaPredicted RBP0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 CYP2G1PQ6ZSU1 146 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 ZNF720Q7Z2F6 126 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 VMO1Q7Z5L0 202 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 Q86TA4 180 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SPTSSBQ8NFR3 76 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 FAM213BQ8TBF2 198 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SPACA4Q8TDM5 124 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 IFI27L1Q96BM0 104 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 S100A16Q96FQ6 103 aaKnown RBP0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 FAM167A-AS1Q96KT0 104 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 LINC01600Q96MT4 127 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 ODF3Q96PU9 254 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 AMELXQ99217 191 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 AMELYQ99218 206 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 LIMD2Q9BT23 127 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 ST20Q9HBF5 79 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 DYNLRB1Q9NP97 96 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 MANBALQ9NQG1 85 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SMCO4Q9NRQ5 59 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 PRO1854Q9UHT4 67 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 KLK9Q9UKQ9 250 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 LENEPQ9Y5L5 61 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SPCS1Q9Y6A9 102 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SCN9AQ15858 1988 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SCN8AQ9UQD0 1980 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 MAGI3Q5TCQ9 1506 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 EHBP1L1Q8N3D4 1523 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 UGGT2Q9NYU1 1516 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 RGPD3A6NKT7 1758 aaPredicted RBP0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 ARID1AO14497 2285 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 POLEQ07864 2286 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 TIAM1Q13009 1591 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 SETBP1Q9Y6X0 1596 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 LTBP2Q14767 1821 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 TDRD6O60522 2096 aaKnown RBP0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 ANKRD12Q6UB98 2062 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 IQGAP3Q86VI3 1631 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 MROH1Q8NDA8 1641 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 TANC1Q9C0D5 1861 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 PLXNA4Q9HCM2 1894 aa0.31□□□□□ -2.36
RNU4-54P-201ENST00000516428 MALRD1Q5VYJ5 2156 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 MYH8P13535 1937 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 KIF21AQ7Z4S6 1674 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 CTTNBP2Q8WZ74 1663 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 RREB1Q92766 1687 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 HFM1A2PYH4 1435 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 EDC4Q6P2E9 1401 aaKnown RBP0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 CABIN1Q9Y6J0 2220 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 TANC2Q9HCD6 1990 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 UBR1Q8IWV7 1749 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 NRXN2Q9P2S2 1712 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 MRC1P22897 1456 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 STRCP1A6NGW2 1772 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 RGPD8O14715 1765 aaPredicted RBP0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 SIPA1L3O60292 1781 aaPredicted RBP0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 LTN1O94822 1766 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 RGPD5Q99666 1765 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 DLEC1Q9Y238 1755 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 EFCAB5A4FU69 1503 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 HMGXB3Q12766 1538 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 SIP14410 1827 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 PSME4Q14997 1843 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 DOCK2Q92608 1830 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 TRBV25-1A0A075B6N4 114 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 IGKV2-40A0A087WW87 121 aaPredicted RBP0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 LOC110117498A0A087WWA1 95 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 TRBV6-7A0A0A0MS04 114 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 TRAV22A0A0B4J277 110 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 LOC101927531A0A1B0GV80 90 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 A0A1W2PPM0 123 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 SDHAF1A6NFY7 115 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 TMEM14DPA8MWL7 114 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 CHKB-CPT1BH3BT56 60 aa0.3□□□□□ -2.36
RNU4-54P-201ENST00000516428 M0R2N4 97 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 484.1 ms