RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 GNGT2O14610 69 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 ZNF737O75373 536 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 SULT1C4O75897 302 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 METTL15P1P0C7V9 234 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 RNASE2P10153 161 aaKnown RBP1.58□□□□□ -2.16
HERC4-215ENST00000515753 COX4I1P13073 169 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 CCL3L1P16619 93 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 NFYBP25208 207 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 GTF2A1P52655 376 aaPredicted RBP1.58□□□□□ -2.16
HERC4-215ENST00000515753 FXYD6P3P58550 94 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 RPS28P62857 69 aaKnown RBP1.58□□□□□ -2.16
HERC4-215ENST00000515753 SUPT4H1P63272 117 aaKnown RBP1.58□□□□□ -2.16
HERC4-215ENST00000515753 HES1Q14469 280 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 SURF2Q15527 256 aaPredicted RBP1.58□□□□□ -2.16
HERC4-215ENST00000515753 NDUFA5Q16718 116 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 LINC01590Q5TEZ4 76 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 TMEM244Q5VVB8 128 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 DPPA3Q6W0C5 159 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 TCTEX1D1Q8N7M0 179 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 OR2T10Q8NGZ9 312 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 HIST1H2BLQ99880 126 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 GINS4Q9BRT9 223 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 C6orf62Q9GZU0 229 aaPredicted RBP1.58□□□□□ -2.16
HERC4-215ENST00000515753 LAMTOR2Q9Y2Q5 125 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 HILPDAQ9Y5L2 63 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 R4GMQ9 66 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 FREM3P0C091 2139 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 DCHS2Q6V1P9 2916 aa1.58□□□□□ -2.16
HERC4-215ENST00000515753 SONP18583 2426 aaKnown RBP1.58□□□□□ -2.16
HERC4-215ENST00000515753 TACC2O95359 2948 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 MED12LQ86YW9 2145 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 IGKV1-9A0A0C4DH69 117 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 ODAMA1E959 279 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 C7orf71A4D174 169 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 ZNF670-ZNF695F2Z2N8 137 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 LY6LH3BQJ8 138 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 M0R378 163 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 OVOL1O14753 267 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 DEGS1O15121 323 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 IGLV3-1P01715 115 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 TRGC2P03986 189 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 IGKV1-16P04430 117 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 HTR1AP08908 422 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 PIPP12273 146 aaPredicted RBP1.57□□□□□ -2.16
HERC4-215ENST00000515753 RPS27P42677 84 aaKnown RBP1.57□□□□□ -2.16
HERC4-215ENST00000515753 EIF2B2P49770 351 aaKnown RBP1.57□□□□□ -2.16
HERC4-215ENST00000515753 SMCO1Q147U7 214 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 DHFR2Q86XF0 187 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 C5orf56Q8N8D9 126 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 OR5D14Q8NGL3 314 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 C4orf3Q8WVX3 66 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 C20orf166-AS1Q96NR2 134 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 S100A13Q99584 98 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 CST11Q9H112 138 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 NHP2Q9NX24 153 aaKnown RBP1.57□□□□□ -2.16
HERC4-215ENST00000515753 OR52A1Q9UKL2 312 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 V9GYS6 101 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 NCKAP5O14513 1909 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 CR1P17927 2039 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 PRRC2CQ9Y520 2896 aaKnown RBP1.57□□□□□ -2.16
HERC4-215ENST00000515753 ANK2Q01484 3957 aa1.57□□□□□ -2.16
HERC4-215ENST00000515753 EML6Q6ZMW3 1958 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 MEIKINA0A087WXM9 373 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 A0A1W2PNN7 141 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 TMEM30CPA0ZSE6 113 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 H3BUA1 57 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 OR2H2O95918 312 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 DHFRP00374 187 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 PPBPP02775 128 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 GYPBP06028 91 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 CD2P06729 351 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 OR10J4P0C629 311 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 BCL2P10415 239 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 RNASE4P34096 147 aaKnown RBP1.56□□□□□ -2.16
HERC4-215ENST00000515753 UBE2BP63146 152 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 RTL8BQ17RB0 113 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 MPV17LQ2QL34 196 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 SLC25A26Q70HW3 274 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 PRR15Q8IV56 129 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 LINC00311Q8N616 119 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 MAFIPQ8WZ33 124 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 TMEM126AQ9H061 195 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 MALRD1Q5VYJ5 2156 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 NBEAL1Q6ZS30 2694 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 ROS1P08922 2347 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 HEATR5AQ86XA9 2040 aa1.56□□□□□ -2.16
HERC4-215ENST00000515753 VPS13CQ709C8 3753 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 MED12Q93074 2177 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 CUBNO60494 3623 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 BORCS7-ASMTA0A0B4J1R7 106 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 TRAV5A0A0B4J249 113 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 NUPR2A6NF83 97 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 MCRIP1C9JLW8 97 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 SDCBPO00560 298 aaPredicted RBP1.55□□□□□ -2.16
HERC4-215ENST00000515753 IGLV1-51P01701 117 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 LGALS3P17931 250 aaKnown RBP1.55□□□□□ -2.16
HERC4-215ENST00000515753 ZNF137PP52743 207 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 PPP3R1P63098 170 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 ERHP84090 104 aaKnown RBP1.55□□□□□ -2.16
HERC4-215ENST00000515753 PRB3Q04118 309 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms