RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 Q9H8V8 135 aa8.18□□□□□ -1.1
SNF8-215ENST00000515572 TNFRSF18Q9Y5U5 241 aa8.18□□□□□ -1.1
SNF8-215ENST00000515572 LYSTQ99698 3801 aa8.18□□□□□ -1.1
SNF8-215ENST00000515572 TRAV8-6A0A0B4J262 113 aa8.17□□□□□ -1.1
SNF8-215ENST00000515572 HBBP68871 147 aa8.17□□□□□ -1.1
SNF8-215ENST00000515572 RHEBQ15382 184 aa8.17□□□□□ -1.1
SNF8-215ENST00000515572 LELP1Q5T871 98 aa8.17□□□□□ -1.1
SNF8-215ENST00000515572 ATP5L2Q7Z4Y8 100 aa8.17□□□□□ -1.1
SNF8-215ENST00000515572 DAZ4Q86SG3 579 aaKnown RBP8.17□□□□□ -1.1
SNF8-215ENST00000515572 NIT2Q9NQR4 276 aa8.17□□□□□ -1.1
SNF8-215ENST00000515572 DAZ3Q9NR90 486 aaKnown RBP8.17□□□□□ -1.1
SNF8-215ENST00000515572 IGLV2-18A0A075B6J9 118 aa8.16□□□□□ -1.1
SNF8-215ENST00000515572 A0A1B0GXF2 115 aa8.16□□□□□ -1.1
SNF8-215ENST00000515572 SIVA1O15304 175 aa8.16□□□□□ -1.1
SNF8-215ENST00000515572 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
SNF8-215ENST00000515572 GATD1Q8NB37 220 aa8.16□□□□□ -1.1
SNF8-215ENST00000515572 CLRN3Q8NCR9 226 aa8.16□□□□□ -1.1
SNF8-215ENST00000515572 MRAP2Q96G30 205 aa8.16□□□□□ -1.1
SNF8-215ENST00000515572 TMEM242Q9NWH2 141 aa8.16□□□□□ -1.1
SNF8-215ENST00000515572 VPS13DQ5THJ4 4388 aa8.16□□□□□ -1.1
SNF8-215ENST00000515572 NBDYA0A0U1RRE5 68 aa8.15□□□□□ -1.1
SNF8-215ENST00000515572 K7EP13 123 aa8.15□□□□□ -1.1
SNF8-215ENST00000515572 CAMPP49913 170 aa8.15□□□□□ -1.1
SNF8-215ENST00000515572 TMEM97Q5BJF2 176 aa8.15□□□□□ -1.1
SNF8-215ENST00000515572 OR10J3Q5JRS4 329 aa8.15□□□□□ -1.1
SNF8-215ENST00000515572 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.1
SNF8-215ENST00000515572 KCNIP4Q6PIL6 250 aa8.15□□□□□ -1.1
SNF8-215ENST00000515572 BTF3L4Q96K17 158 aa8.15□□□□□ -1.1
SNF8-215ENST00000515572 TRAV9-1A0A075B6T8 112 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 TRAV26-2A0A0B4J265 109 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 C7orf77A4D0Y5 90 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 PPP1R17O96001 155 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 DNAH10OSP0CZ25 163 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 RAB4AP20338 218 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 Q6ZR54 194 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 WFDC10BQ8IUB3 73 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 AMN1Q8IY45 258 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 SVBPQ8N300 66 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 RNF185Q96GF1 192 aa8.14□□□□□ -1.11
SNF8-215ENST00000515572 TRAV9-2A0A087WT02 112 aa8.13□□□□□ -1.11
SNF8-215ENST00000515572 IGHV3-38A0A0C4DH36 116 aa8.13□□□□□ -1.11
SNF8-215ENST00000515572 M0R2N4 97 aa8.13□□□□□ -1.11
SNF8-215ENST00000515572 SNAPINO95295 136 aa8.13□□□□□ -1.11
SNF8-215ENST00000515572 APOC3P02656 99 aa8.13□□□□□ -1.11
SNF8-215ENST00000515572 S100PP25815 95 aa8.13□□□□□ -1.11
SNF8-215ENST00000515572 FAM104BQ5XKR9 115 aa8.13□□□□□ -1.11
SNF8-215ENST00000515572 RPS10P5Q9NQ39 176 aa8.13□□□□□ -1.11
SNF8-215ENST00000515572 RYR2Q92736 4967 aa8.13□□□□□ -1.11
SNF8-215ENST00000515572 SACSQ9NZJ4 4579 aa8.12□□□□□ -1.11
SNF8-215ENST00000515572 TRBV6-8A0A0A6YYG3 113 aa8.12□□□□□ -1.11
SNF8-215ENST00000515572 TRBV6-5A0A0K0K1A5 114 aa8.12□□□□□ -1.11
SNF8-215ENST00000515572 BTF3P20290 206 aaKnown RBP8.12□□□□□ -1.11
SNF8-215ENST00000515572 LINC01556Q5JQF7 62 aa8.12□□□□□ -1.11
SNF8-215ENST00000515572 HYDINQ4G0P3 5121 aa8.12□□□□□ -1.11
SNF8-215ENST00000515572 SLC7A5P1Q8MH63 180 aa8.11□□□□□ -1.11
SNF8-215ENST00000515572 RPL39LQ96EH5 51 aaKnown RBP8.11□□□□□ -1.11
SNF8-215ENST00000515572 TRBV25-1A0A075B6N4 114 aa8.1□□□□□ -1.11
SNF8-215ENST00000515572 PPBPP02775 128 aa8.1□□□□□ -1.11
SNF8-215ENST00000515572 PKIAP61925 76 aa8.1□□□□□ -1.11
SNF8-215ENST00000515572 MRPL51Q4U2R6 128 aaKnown RBP8.1□□□□□ -1.11
SNF8-215ENST00000515572 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
SNF8-215ENST00000515572 ST20Q9HBF5 79 aa8.1□□□□□ -1.11
SNF8-215ENST00000515572 URGCP-MRPS24S4R325 110 aa8.1□□□□□ -1.11
SNF8-215ENST00000515572 DNAH6Q9C0G6 4158 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 IGHV1-24A0A0C4DH33 117 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 SDHAF1A6NFY7 115 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 NCR2O95944 276 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 CKS2P33552 79 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 COTL1Q14019 142 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 IQCJQ1A5X6 159 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 NTM-AS1Q6ZSK4 140 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 CHCHD7Q9BUK0 85 aa8.09□□□□□ -1.11
SNF8-215ENST00000515572 I3L3M4 83 aa8.08□□□□□ -1.12
SNF8-215ENST00000515572 GAS8-AS1O95177 125 aa8.08□□□□□ -1.12
SNF8-215ENST00000515572 RPS10P46783 165 aaKnown RBP8.08□□□□□ -1.12
SNF8-215ENST00000515572 COX19Q49B96 90 aa8.08□□□□□ -1.12
SNF8-215ENST00000515572 NIT1Q86X76 327 aa8.08□□□□□ -1.12
SNF8-215ENST00000515572 ORMDL3Q8N138 153 aa8.08□□□□□ -1.12
SNF8-215ENST00000515572 C6orf223Q8N319 242 aa8.08□□□□□ -1.12
SNF8-215ENST00000515572 NRACQ8N912 160 aa8.08□□□□□ -1.12
SNF8-215ENST00000515572 TMEM70Q9BUB7 260 aa8.08□□□□□ -1.12
SNF8-215ENST00000515572 KRTAP1-5Q9BYS1 174 aa8.08□□□□□ -1.12
SNF8-215ENST00000515572 TRBV24-1A0A075B6N3 115 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 A0A087WX48 190 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 TRBV27A0A0K0K1C4 114 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 SMKR1H3BMG3 65 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 PHOX2AO14813 284 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 IGHV3-30P01768 117 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 IGHV3-33P01772 117 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 IGHV3-30-3P0DP02 117 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 IGHV3-30-5P0DP03 117 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 PMCHP20382 165 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 AMTP48728 403 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 SUMO2P61956 95 aaKnown RBP8.07□□□□□ -1.12
SNF8-215ENST00000515572 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 CHCHD5Q9BSY4 110 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 TMEM243Q9BU79 118 aa8.07□□□□□ -1.12
SNF8-215ENST00000515572 D6R8Y8 96 aa8.06□□□□□ -1.12
SNF8-215ENST00000515572 TMEM262E9PQX1 116 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms