RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 AP1S3Q96PC3 154 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 DERL1Q9BUN8 251 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 BIN3Q9NQY0 253 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.05□□□□□ -0.96
TCOF1-215ENST00000515516 CRPP02741 224 aa9.05□□□□□ -0.96
TCOF1-215ENST00000515516 C1QBP02746 253 aa9.05□□□□□ -0.96
TCOF1-215ENST00000515516 SLC51BQ86UW2 128 aa9.05□□□□□ -0.96
TCOF1-215ENST00000515516 TCTE3Q8IZS6 198 aa9.05□□□□□ -0.96
TCOF1-215ENST00000515516 OR2D3Q8NGH3 330 aa9.05□□□□□ -0.96
TCOF1-215ENST00000515516 SMIM12Q96EX1 92 aa9.05□□□□□ -0.96
TCOF1-215ENST00000515516 CHCHD5Q9BSY4 110 aa9.05□□□□□ -0.96
TCOF1-215ENST00000515516 MED9Q9NWA0 146 aa9.05□□□□□ -0.96
TCOF1-215ENST00000515516 CACNG7P62955 275 aa9.04□□□□□ -0.96
TCOF1-215ENST00000515516 HAMPP81172 84 aa9.04□□□□□ -0.96
TCOF1-215ENST00000515516 MEF2BQ02080 365 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-215ENST00000515516 WFDC2Q14508 124 aa9.04□□□□□ -0.96
TCOF1-215ENST00000515516 FER1L6-AS1Q8NA97 138 aa9.04□□□□□ -0.96
TCOF1-215ENST00000515516 RAB19A4D1S5 217 aa9.03□□□□□ -0.96
TCOF1-215ENST00000515516 H7C1H1 209 aa9.03□□□□□ -0.96
TCOF1-215ENST00000515516 P01737 135 aa9.03□□□□□ -0.96
TCOF1-215ENST00000515516 MGPP08493 103 aa9.03□□□□□ -0.96
TCOF1-215ENST00000515516 GZMBP10144 247 aa9.03□□□□□ -0.96
TCOF1-215ENST00000515516 TAGLN2P37802 199 aaKnown RBP9.03□□□□□ -0.96
TCOF1-215ENST00000515516 C15orf54Q8N8G6 183 aa9.03□□□□□ -0.96
TCOF1-215ENST00000515516 C1orf43Q9BWL3 253 aa9.03□□□□□ -0.96
TCOF1-215ENST00000515516 VAX2Q9UIW0 290 aa9.03□□□□□ -0.96
TCOF1-215ENST00000515516 F2Z2F3 143 aa9.02□□□□□ -0.97
TCOF1-215ENST00000515516 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
TCOF1-215ENST00000515516 DNAJC30Q96LL9 226 aa9.02□□□□□ -0.97
TCOF1-215ENST00000515516 C19orf71A6NCJ1 209 aa9.01□□□□□ -0.97
TCOF1-215ENST00000515516 IGLV2-8P01709 118 aa9.01□□□□□ -0.97
TCOF1-215ENST00000515516 BCL2P10415 239 aa9.01□□□□□ -0.97
TCOF1-215ENST00000515516 C14orf177Q52M58 125 aa9.01□□□□□ -0.97
TCOF1-215ENST00000515516 FAM30AQ9NZY2 134 aa9.01□□□□□ -0.97
TCOF1-215ENST00000515516 KIF25-AS1Q9Y6Z4 181 aa9.01□□□□□ -0.97
TCOF1-215ENST00000515516 TRBV25-1A0A075B6N4 114 aa9□□□□□ -0.97
TCOF1-215ENST00000515516 TRGC1P0CF51 173 aa9□□□□□ -0.97
TCOF1-215ENST00000515516 IGLC6P0CF74 106 aa9□□□□□ -0.97
TCOF1-215ENST00000515516 MPV17L2Q567V2 206 aa9□□□□□ -0.97
TCOF1-215ENST00000515516 ATRAIDQ6UW56 229 aa9□□□□□ -0.97
TCOF1-215ENST00000515516 GAGE6Q13070 117 aa8.99□□□□□ -0.97
TCOF1-215ENST00000515516 ENHOQ6UWT2 76 aa8.99□□□□□ -0.97
TCOF1-215ENST00000515516 IGHV1-24A0A0C4DH33 117 aa8.98□□□□□ -0.97
TCOF1-215ENST00000515516 M0QY20 66 aa8.98□□□□□ -0.97
TCOF1-215ENST00000515516 MIAQ16674 131 aa8.98□□□□□ -0.97
TCOF1-215ENST00000515516 SUMO4Q6EEV6 95 aa8.98□□□□□ -0.97
TCOF1-215ENST00000515516 LYZL1Q6UWQ5 148 aa8.98□□□□□ -0.97
TCOF1-215ENST00000515516 AKAP14Q86UN6 197 aa8.98□□□□□ -0.97
TCOF1-215ENST00000515516 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
TCOF1-215ENST00000515516 WDR73Q6P4I2 378 aa8.97□□□□□ -0.97
TCOF1-215ENST00000515516 RASL11AQ6T310 242 aa8.97□□□□□ -0.97
TCOF1-215ENST00000515516 NTM-AS1Q6ZSK4 140 aa8.97□□□□□ -0.97
TCOF1-215ENST00000515516 C9orf62Q8N4C0 152 aa8.97□□□□□ -0.97
TCOF1-215ENST00000515516 NUDT10Q8NFP7 164 aa8.97□□□□□ -0.97
TCOF1-215ENST00000515516 NUDT11Q96G61 164 aa8.97□□□□□ -0.97
TCOF1-215ENST00000515516 DPH3P1Q9H4G8 78 aa8.97□□□□□ -0.97
TCOF1-215ENST00000515516 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 HLA-DQA1P01909 254 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 NTF3P20783 257 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 NKX2-5P52952 324 aaPredicted RBP8.96□□□□□ -0.98
TCOF1-215ENST00000515516 RBX1P62877 108 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 BLOC1S1P78537 153 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 TWIST1Q15672 202 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 IQCJQ1A5X6 159 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 LINC01620Q4KN68 170 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 Q6ZNX1 250 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 Q6ZSA8 131 aa8.96□□□□□ -0.98
TCOF1-215ENST00000515516 SMIM15Q7Z3B0 74 aa8.95□□□□□ -0.98
TCOF1-215ENST00000515516 LINC00269Q8N2A0 174 aa8.95□□□□□ -0.98
TCOF1-215ENST00000515516 RPP21Q9H633 154 aaKnown RBP8.95□□□□□ -0.98
TCOF1-215ENST00000515516 NIT2Q9NQR4 276 aa8.95□□□□□ -0.98
TCOF1-215ENST00000515516 FAT1Q14517 4588 aa8.94□□□□□ -0.98
TCOF1-215ENST00000515516 hCG_2014768A0A024R1R8 64 aa8.94□□□□□ -0.98
TCOF1-215ENST00000515516 UBE2L6O14933 153 aa8.94□□□□□ -0.98
TCOF1-215ENST00000515516 CLPSL2Q6UWE3 100 aa8.94□□□□□ -0.98
TCOF1-215ENST00000515516 LINC00528Q8N1L1 170 aa8.94□□□□□ -0.98
TCOF1-215ENST00000515516 OCC1Q8TAD7 63 aa8.94□□□□□ -0.98
TCOF1-215ENST00000515516 TMEM243Q9BU79 118 aa8.94□□□□□ -0.98
TCOF1-215ENST00000515516 RNASE7Q9H1E1 156 aaKnown RBP8.94□□□□□ -0.98
TCOF1-215ENST00000515516 USP17L23D6RBM5 183 aa8.93□□□□□ -0.98
TCOF1-215ENST00000515516 CTRLP40313 264 aa8.93□□□□□ -0.98
TCOF1-215ENST00000515516 PRR34Q9NV39 138 aa8.93□□□□□ -0.98
TCOF1-215ENST00000515516 VPS13BQ7Z7G8 4022 aa8.93□□□□□ -0.98
TCOF1-215ENST00000515516 TMEM250H0YL14 139 aa8.92□□□□□ -0.98
TCOF1-215ENST00000515516 CEBPGP53567 150 aa8.92□□□□□ -0.98
TCOF1-215ENST00000515516 REG3AQ06141 175 aa8.92□□□□□ -0.98
TCOF1-215ENST00000515516 COTL1Q14019 142 aa8.92□□□□□ -0.98
TCOF1-215ENST00000515516 ALKAL2Q6UX46 152 aa8.92□□□□□ -0.98
TCOF1-215ENST00000515516 PGLYRP4Q96LB8 373 aa8.92□□□□□ -0.98
TCOF1-215ENST00000515516 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
TCOF1-215ENST00000515516 K7EN84 100 aa8.91□□□□□ -0.98
TCOF1-215ENST00000515516 GATCO43716 136 aaKnown RBP8.91□□□□□ -0.98
TCOF1-215ENST00000515516 AMTP48728 403 aa8.91□□□□□ -0.98
TCOF1-215ENST00000515516 DGAT2L7PQ6IED9 249 aa8.91□□□□□ -0.98
TCOF1-215ENST00000515516 SCXQ7RTU7 201 aa8.91□□□□□ -0.98
TCOF1-215ENST00000515516 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
TCOF1-215ENST00000515516 DNAH8Q96JB1 4490 aa8.91□□□□□ -0.98
TCOF1-215ENST00000515516 TRAV8-4A0A0B4J246 113 aa8.9□□□□□ -0.98
TCOF1-215ENST00000515516 A0A1B0GUV1 79 aa8.9□□□□□ -0.98
TCOF1-215ENST00000515516 BORCS7Q96B45 105 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms