RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 ARHGAP31Q2M1Z3 1444 aa-0.58□□□□□ -2.5
MBD4-210ENST00000515266 CEP295Q9C0D2 2601 aa-0.58□□□□□ -2.5
MBD4-210ENST00000515266 ANKRD31Q8N7Z5 1873 aa-0.58□□□□□ -2.5
MBD4-210ENST00000515266 NUP210Q8TEM1 1887 aaPredicted RBP-0.58□□□□□ -2.5
MBD4-210ENST00000515266 TRAV1-2A0A0B4J238 106 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 A0A1B0GW64 132 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 PFDN1O60925 122 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 FAM107AO95990 144 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 SLC25A5P05141 298 aaKnown RBP-0.59□□□□□ -2.5
MBD4-210ENST00000515266 SMIM6P0DI80 62 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 HIST1H1BP16401 226 aaKnown RBP-0.59□□□□□ -2.5
MBD4-210ENST00000515266 HSD11B1P28845 292 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 RPL22P35268 128 aaKnown RBP-0.59□□□□□ -2.5
MBD4-210ENST00000515266 EDDM3BP56851 147 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 NPC2P61916 151 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 PSPHP78330 225 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 SPCS2Q15005 226 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 SPAG11AQ6PDA7 123 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 TMED4Q7Z7H5 227 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 SMIM20Q8N5G0 67 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 DYNLRB2Q8TF09 96 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 LYSTQ99698 3801 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 TP53AIP1Q9HCN2 124 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 NPVFQ9HCQ7 196 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 SCN3BQ9NY72 215 aa-0.59□□□□□ -2.5
MBD4-210ENST00000515266 YTHDC2Q9H6S0 1430 aaKnown RBP-0.59□□□□□ -2.5
MBD4-210ENST00000515266 CAMSAP1Q5T5Y3 1602 aa-0.6□□□□□ -2.5
MBD4-210ENST00000515266 A2MP01023 1474 aa-0.6□□□□□ -2.5
MBD4-210ENST00000515266 ARAP1Q96P48 1450 aa-0.6□□□□□ -2.5
MBD4-210ENST00000515266 ZNF609O15014 1411 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 BORCS7-ASMTA0A0B4J1R7 106 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 TRAV12-3A0A0B4J271 114 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 TRBV6-1A0A0K0K1D8 114 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 CCDC179H3BU77 68 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 M0R2T5 61 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 BCE1O60756 84 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 Q5VV11 94 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 DCUN1D2Q6PH85 259 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 HRCT1Q6UXD1 115 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 SNX29P2Q8IUI4 249 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 WFDC6Q9BQY6 131 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 SLC35B3Q9H1N7 401 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 NOP16Q9Y3C1 178 aaKnown RBP-0.6□□□□□ -2.51
MBD4-210ENST00000515266 MED31Q9Y3C7 131 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 NBASA2RRP1 2371 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 ZNF142P52746 1687 aaPredicted RBP-0.6□□□□□ -2.51
MBD4-210ENST00000515266 WDR97A6NE52 1622 aa-0.6□□□□□ -2.51
MBD4-210ENST00000515266 PLXNA2O75051 1894 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 KIF13AQ9H1H9 1805 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 KNL1Q8NG31 2342 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 MYH3P11055 1940 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 PKHD1L1Q86WI1 4243 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 FAM92AA1XBS5 289 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 SPINK4O60575 86 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 TCRAP04437 139 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 SPRR1BP22528 89 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 SERPINB1P30740 379 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 HAMPP81172 84 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 KLK9Q2XQG4 91 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 KRTAP6-2Q3LI66 62 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 PIGYQ3MUY2 71 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 CFAP126Q5VTH2 177 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 BAGE3Q86Y29 109 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 STX12Q86Y82 276 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 ATP6V0E2Q8NHE4 81 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 TRAPPC2LQ9UL33 140 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 ZMYM4Q5VZL5 1548 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 CFAP46Q8IYW2 2715 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.61□□□□□ -2.51
MBD4-210ENST00000515266 PHIPQ8WWQ0 1821 aa-0.61□□□□□ -2.51
MBD4-210ENST00000515266 E7EQ34 232 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 J3KT08 172 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 YPEL1O60688 119 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 RBP4P02753 201 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 COX6B1P14854 86 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 SPRR2EP22531 72 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 POLR2HP52434 150 aaKnown RBP-0.62□□□□□ -2.51
MBD4-210ENST00000515266 ATP11AUNQ6ZP68 121 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 THEM6Q8WUY1 208 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 FXYD6Q9H0Q3 95 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 STOML2Q9UJZ1 356 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 AKAP9Q99996 3911 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 IBTKQ9P2D0 1353 aaPredicted RBP-0.62□□□□□ -2.51
MBD4-210ENST00000515266 MED23Q9ULK4 1368 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 UHRF1BP1LA0JNW5 1464 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 PTPRMP28827 1452 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 DNAH3Q8TD57 4116 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 CASZ1Q86V15 1759 aa-0.62□□□□□ -2.51
MBD4-210ENST00000515266 FER1L6Q2WGJ9 1857 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 NBEAQ8NFP9 2946 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 WNK3Q9BYP7 1800 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 H0YJX3 145 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 I3L2K1 104 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 J3QLW9 94 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 SMIM24O75264 130 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 TMEM78Q5T7P6 136 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 RPL7L1Q6DKI1 246 aaKnown RBP-0.63□□□□□ -2.51
MBD4-210ENST00000515266 TMEM91Q6ZNR0 172 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 BOLA2Q9H3K6 86 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 CALML5Q9NZT1 146 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms