RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 FAM162BQ5T6X4 162 aa6.77□□□□□ -1.33
NEDD9-215ENST00000514660 NUDT10Q8NFP7 164 aa6.77□□□□□ -1.33
NEDD9-215ENST00000514660 ISOC2Q96AB3 205 aa6.77□□□□□ -1.33
NEDD9-215ENST00000514660 NUDT11Q96G61 164 aa6.77□□□□□ -1.33
NEDD9-215ENST00000514660 MUC2Q02817 5179 aa6.76□□□□□ -1.33
NEDD9-215ENST00000514660 TRGV4A0A0C4DH28 118 aa6.76□□□□□ -1.33
NEDD9-215ENST00000514660 PFN1P07737 140 aaKnown RBP6.76□□□□□ -1.33
NEDD9-215ENST00000514660 ADIRFQ15847 76 aa6.76□□□□□ -1.33
NEDD9-215ENST00000514660 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
NEDD9-215ENST00000514660 RNASE7Q9H1E1 156 aaKnown RBP6.76□□□□□ -1.33
NEDD9-215ENST00000514660 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-215ENST00000514660 TRAV21A0A0B4J279 112 aa6.75□□□□□ -1.33
NEDD9-215ENST00000514660 IGKV3D-20A0A0C4DH25 116 aa6.75□□□□□ -1.33
NEDD9-215ENST00000514660 GNRH2O43555 120 aa6.75□□□□□ -1.33
NEDD9-215ENST00000514660 APOC3P02656 99 aa6.75□□□□□ -1.33
NEDD9-215ENST00000514660 TIRAPP58753 221 aa6.75□□□□□ -1.33
NEDD9-215ENST00000514660 IBA57Q5T440 356 aaKnown RBP6.75□□□□□ -1.33
NEDD9-215ENST00000514660 FAM231DQ6ZW35 169 aa6.75□□□□□ -1.33
NEDD9-215ENST00000514660 BIN3Q9NQY0 253 aa6.75□□□□□ -1.33
NEDD9-215ENST00000514660 OSTCQ9NRP0 149 aa6.75□□□□□ -1.33
NEDD9-215ENST00000514660 IGHV1OR15-1A0A075B7D0 117 aa6.74□□□□□ -1.33
NEDD9-215ENST00000514660 ORM1P02763 201 aa6.74□□□□□ -1.33
NEDD9-215ENST00000514660 RPL19P84098 196 aaKnown RBP6.74□□□□□ -1.33
NEDD9-215ENST00000514660 PNRC1Q12796 327 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-215ENST00000514660 MUC21Q5SSG8 566 aa6.74□□□□□ -1.33
NEDD9-215ENST00000514660 CLRN3Q8NCR9 226 aa6.74□□□□□ -1.33
NEDD9-215ENST00000514660 OR10G8Q8NGN5 311 aa6.74□□□□□ -1.33
NEDD9-215ENST00000514660 LINC01600Q96MT4 127 aa6.74□□□□□ -1.33
NEDD9-215ENST00000514660 TM2D2Q9BX73 214 aa6.74□□□□□ -1.33
NEDD9-215ENST00000514660 M0R036 132 aa6.73□□□□□ -1.33
NEDD9-215ENST00000514660 GATCO43716 136 aaKnown RBP6.73□□□□□ -1.33
NEDD9-215ENST00000514660 KRTAP10-8P60410 259 aa6.73□□□□□ -1.33
NEDD9-215ENST00000514660 LAGE3Q14657 143 aa6.73□□□□□ -1.33
NEDD9-215ENST00000514660 TDRG1Q3Y452 100 aa6.73□□□□□ -1.33
NEDD9-215ENST00000514660 ATRAIDQ6UW56 229 aa6.73□□□□□ -1.33
NEDD9-215ENST00000514660 DAZ4Q86SG3 579 aaKnown RBP6.73□□□□□ -1.33
NEDD9-215ENST00000514660 SFRP2Q96HF1 295 aa6.73□□□□□ -1.33
NEDD9-215ENST00000514660 DAZ3Q9NR90 486 aaKnown RBP6.73□□□□□ -1.33
NEDD9-215ENST00000514660 V9GYV3 84 aa6.73□□□□□ -1.33
NEDD9-215ENST00000514660 TMSB15BA0A087X1C1 80 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 IGHV3-16A0A0C4DH30 117 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 C7orf77A4D0Y5 90 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 GRIFINA4D1Z8 144 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 B4DEV8 164 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 ATP6V1G1O75348 118 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 P01737 135 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 TYMSP04818 313 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 GZMBP10144 247 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 FAM159AQ6UWV7 190 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 OR2D3Q8NGH3 330 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 RPP21Q9H633 154 aaKnown RBP6.72□□□□□ -1.33
NEDD9-215ENST00000514660 NAGKQ9UJ70 344 aa6.72□□□□□ -1.33
NEDD9-215ENST00000514660 MT-ND4LP03901 98 aa6.71□□□□□ -1.34
NEDD9-215ENST00000514660 OR10J3Q5JRS4 329 aa6.71□□□□□ -1.34
NEDD9-215ENST00000514660 DNLZQ5SXM8 178 aa6.71□□□□□ -1.34
NEDD9-215ENST00000514660 SVBPQ8N300 66 aa6.71□□□□□ -1.34
NEDD9-215ENST00000514660 C15orf54Q8N8G6 183 aa6.71□□□□□ -1.34
NEDD9-215ENST00000514660 KCNS1Q96KK3 526 aa6.71□□□□□ -1.34
NEDD9-215ENST00000514660 A8MWL6 223 aa6.7□□□□□ -1.34
NEDD9-215ENST00000514660 SNAPINO95295 136 aa6.7□□□□□ -1.34
NEDD9-215ENST00000514660 RNASE3P12724 160 aaKnown RBP6.7□□□□□ -1.34
NEDD9-215ENST00000514660 RPS20P60866 119 aaKnown RBP6.7□□□□□ -1.34
NEDD9-215ENST00000514660 Q8N976 141 aa6.7□□□□□ -1.34
NEDD9-215ENST00000514660 GTSF1Q8WW33 167 aa6.7□□□□□ -1.34
NEDD9-215ENST00000514660 RASL10AQ92737 203 aa6.7□□□□□ -1.34
NEDD9-215ENST00000514660 CTDSP1Q9GZU7 261 aa6.7□□□□□ -1.34
NEDD9-215ENST00000514660 RPS10P5Q9NQ39 176 aa6.7□□□□□ -1.34
NEDD9-215ENST00000514660 A0A087WWC5 75 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 TRAV8-6A0A0B4J262 113 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 SMIM27A0A1W2PRY6 76 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 PPP1R2P9O14990 202 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 CXCL1P09341 107 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 ARMS2P0C7Q2 107 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 IGLC6P0CF74 106 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 GATA1P15976 413 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-215ENST00000514660 S100A1P23297 94 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 FOXA3P55318 350 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-215ENST00000514660 RHEBQ15382 184 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 CT83Q5H943 113 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 TSKUQ8WUA8 353 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 C9orf85Q96MD7 179 aa6.69□□□□□ -1.34
NEDD9-215ENST00000514660 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
NEDD9-215ENST00000514660 ANKRD39Q53RE8 183 aa6.68□□□□□ -1.34
NEDD9-215ENST00000514660 TMEM242Q9NWH2 141 aa6.68□□□□□ -1.34
NEDD9-215ENST00000514660 IL36BQ9NZH7 164 aa6.68□□□□□ -1.34
NEDD9-215ENST00000514660 TRAV8-3A0A0A6YYJ7 113 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 TRAV4A0A0B4J268 109 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 MUC21A0A0G2JKD1 596 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 A0A0J9YXV3 536 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 MUC21A0A140T8X8 626 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 XKRY2A2RUG3 117 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 FAM231BA6NCW3 169 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 H3BVH4 76 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 SNAI2O43623 268 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 OR5AL1P0C617 328 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 LYZL1Q6UWQ5 148 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 NUP35Q8NFH5 326 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 PGLYRP4Q96LB8 373 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 GFRA4Q9GZZ7 299 aa6.67□□□□□ -1.34
NEDD9-215ENST00000514660 HIGD1CA8MV81 97 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms