RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 DMBT1Q9UGM3 2413 aaPredicted RBP0.18□□□□□ -2.38
HMGCS1-207ENST00000514610 IFT172Q9UG01 1749 aa0.18□□□□□ -2.38
HMGCS1-207ENST00000514610 NPFFO15130 113 aa0.17□□□□□ -2.38
HMGCS1-207ENST00000514610 IL5P05113 134 aa0.17□□□□□ -2.38
HMGCS1-207ENST00000514610 COX6A2Q02221 97 aa0.17□□□□□ -2.38
HMGCS1-207ENST00000514610 RPRMQ9NS64 109 aa0.17□□□□□ -2.38
HMGCS1-207ENST00000514610 MYOM3Q5VTT5 1437 aa0.16□□□□□ -2.38
HMGCS1-207ENST00000514610 UBE2G1P62253 170 aa0.16□□□□□ -2.38
HMGCS1-207ENST00000514610 C9orf116Q5BN46 136 aaPredicted RBP0.16□□□□□ -2.38
HMGCS1-207ENST00000514610 TMEM2Q9UHN6 1383 aa0.16□□□□□ -2.38
HMGCS1-207ENST00000514610 SSPOA2VEC9 5147 aa0.16□□□□□ -2.38
HMGCS1-207ENST00000514610 GOLGA3Q08378 1498 aa0.16□□□□□ -2.38
HMGCS1-207ENST00000514610 PRDM2Q13029 1718 aa0.16□□□□□ -2.38
HMGCS1-207ENST00000514610 TRGV1A0A0A0MS02 117 aa0.15□□□□□ -2.39
HMGCS1-207ENST00000514610 S100A7L2Q5SY68 101 aa0.15□□□□□ -2.39
HMGCS1-207ENST00000514610 ZNF292O60281 2723 aa0.15□□□□□ -2.39
HMGCS1-207ENST00000514610 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
HMGCS1-207ENST00000514610 PHLPP1O60346 1717 aa0.15□□□□□ -2.39
HMGCS1-207ENST00000514610 DAPK1P53355 1430 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 HIVEP3Q5T1R4 2406 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 A6NIN4 97 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 SPINK1P00995 79 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 UBE2D1P51668 147 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 EDDM3BP56851 147 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 RRAS2P62070 204 aaPredicted RBP0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 Q5BKY6 102 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 SPTSSBQ8NFR3 76 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 DOCK2Q92608 1830 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 DOCK1Q14185 1865 aa0.14□□□□□ -2.39
HMGCS1-207ENST00000514610 PATJQ8NI35 1801 aa0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 NCOR1O75376 2440 aa0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 TMEM14DPA8MWL7 114 aa0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 PIPP12273 146 aaPredicted RBP0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 COPZ1P61923 177 aa0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 RPS25P62851 125 aaKnown RBP0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 Q6ZRX8 168 aa0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 SPTSSAQ969W0 71 aa0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 IBTKQ9P2D0 1353 aaPredicted RBP0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 BICRAQ9NZM4 1560 aa0.13□□□□□ -2.39
HMGCS1-207ENST00000514610 CLPSL1A2RUU4 121 aa0.12□□□□□ -2.39
HMGCS1-207ENST00000514610 SNCGO76070 127 aa0.12□□□□□ -2.39
HMGCS1-207ENST00000514610 IFNA17P01571 189 aa0.12□□□□□ -2.39
HMGCS1-207ENST00000514610 GCHFRP30047 84 aa0.12□□□□□ -2.39
HMGCS1-207ENST00000514610 SMCO1Q147U7 214 aa0.12□□□□□ -2.39
HMGCS1-207ENST00000514610 WNK2Q9Y3S1 2297 aa0.12□□□□□ -2.39
HMGCS1-207ENST00000514610 PLCE1Q9P212 2302 aa0.12□□□□□ -2.39
HMGCS1-207ENST00000514610 SPTBN2O15020 2390 aa0.11□□□□□ -2.39
HMGCS1-207ENST00000514610 FOCADQ5VW36 1801 aa0.11□□□□□ -2.39
HMGCS1-207ENST00000514610 TRAV1-2A0A0B4J238 106 aa0.11□□□□□ -2.39
HMGCS1-207ENST00000514610 SCIMPQ6UWF3 145 aa0.11□□□□□ -2.39
HMGCS1-207ENST00000514610 FAM213BQ8TBF2 198 aa0.11□□□□□ -2.39
HMGCS1-207ENST00000514610 LRRC37A3O60309 1634 aa0.11□□□□□ -2.39
HMGCS1-207ENST00000514610 FAM208BQ5VWN6 2430 aa0.11□□□□□ -2.39
HMGCS1-207ENST00000514610 KCNRGQ8N5I3 272 aa0.1□□□□□ -2.39
HMGCS1-207ENST00000514610 SCP2D1Q9UJQ7 156 aa0.1□□□□□ -2.39
HMGCS1-207ENST00000514610 WNK3Q9BYP7 1800 aa0.09□□□□□ -2.39
HMGCS1-207ENST00000514610 APOC4-APOC2K7ER74 178 aa0.09□□□□□ -2.4
HMGCS1-207ENST00000514610 CBLN1P23435 193 aa0.09□□□□□ -2.4
HMGCS1-207ENST00000514610 PI4KAP42356 2102 aa0.09□□□□□ -2.4
HMGCS1-207ENST00000514610 INSL4Q14641 139 aa0.09□□□□□ -2.4
HMGCS1-207ENST00000514610 PFDN5Q99471 154 aa0.09□□□□□ -2.4
HMGCS1-207ENST00000514610 PLXNB2O15031 1838 aa0.08□□□□□ -2.4
HMGCS1-207ENST00000514610 NDUFB6O95139 128 aa0.08□□□□□ -2.4
HMGCS1-207ENST00000514610 GUCA1AP43080 201 aaPredicted RBP0.08□□□□□ -2.4
HMGCS1-207ENST00000514610 TCEAL4Q96EI5 215 aa0.08□□□□□ -2.4
HMGCS1-207ENST00000514610 SDF2Q99470 211 aa0.08□□□□□ -2.4
HMGCS1-207ENST00000514610 GRIN2AQ12879 1464 aa0.08□□□□□ -2.4
HMGCS1-207ENST00000514610 DSTQ03001 7570 aaKnown RBP0.08□□□□□ -2.4
HMGCS1-207ENST00000514610 ARAP2Q8WZ64 1704 aa0.07□□□□□ -2.4
HMGCS1-207ENST00000514610 CASKIN1Q8WXD9 1431 aa0.07□□□□□ -2.4
HMGCS1-207ENST00000514610 TRBV10-3A0A0K0K1G6 114 aa0.07□□□□□ -2.4
HMGCS1-207ENST00000514610 FAM92AA1XBS5 289 aa0.07□□□□□ -2.4
HMGCS1-207ENST00000514610 UBE2DNLQ8IWF7 75 aa0.07□□□□□ -2.4
HMGCS1-207ENST00000514610 SEC11CQ9BY50 192 aa0.07□□□□□ -2.4
HMGCS1-207ENST00000514610 TMEM191AQ9H0A3 160 aa0.07□□□□□ -2.4
HMGCS1-207ENST00000514610 DOPEY2Q9Y3R5 2298 aa0.07□□□□□ -2.4
HMGCS1-207ENST00000514610 C2CD3Q4AC94 2353 aa0.06□□□□□ -2.4
HMGCS1-207ENST00000514610 G3V318 75 aa0.06□□□□□ -2.4
HMGCS1-207ENST00000514610 WFDC6Q9BQY6 131 aa0.06□□□□□ -2.4
HMGCS1-207ENST00000514610 ZMYM4Q5VZL5 1548 aa0.06□□□□□ -2.4
HMGCS1-207ENST00000514610 ABCA2Q9BZC7 2435 aa0.06□□□□□ -2.4
HMGCS1-207ENST00000514610 ZNF518AQ6AHZ1 1483 aa0.05□□□□□ -2.4
HMGCS1-207ENST00000514610 ZNF818PQ6ZRF7 136 aa0.05□□□□□ -2.4
HMGCS1-207ENST00000514610 SSBP3-AS1Q7Z2R9 100 aa0.05□□□□□ -2.4
HMGCS1-207ENST00000514610 PDCD10Q9BUL8 212 aa0.05□□□□□ -2.4
HMGCS1-207ENST00000514610 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
HMGCS1-207ENST00000514610 LINC00312Q9Y6C7 94 aa0.05□□□□□ -2.4
HMGCS1-207ENST00000514610 PTPRQQ9UMZ3 2332 aa0.05□□□□□ -2.4
HMGCS1-207ENST00000514610 TCHHQ07283 1943 aa0.05□□□□□ -2.4
HMGCS1-207ENST00000514610 KDM3BQ7LBC6 1761 aa0.04□□□□□ -2.4
HMGCS1-207ENST00000514610 ZNF236Q9UL36 1845 aa0.04□□□□□ -2.4
HMGCS1-207ENST00000514610 ZNF815PA8K554 130 aa0.04□□□□□ -2.4
HMGCS1-207ENST00000514610 AKAP6Q13023 2319 aa0.03□□□□□ -2.4
HMGCS1-207ENST00000514610 HIST1H1DP16402 221 aaKnown RBP0.03□□□□□ -2.4
HMGCS1-207ENST00000514610 ARPC4P59998 168 aa0.03□□□□□ -2.4
HMGCS1-207ENST00000514610 CCDC167Q9P0B6 97 aa0.03□□□□□ -2.4
HMGCS1-207ENST00000514610 SMIM6P0DI80 62 aa0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 CCL8P80075 99 aa0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 DPH3Q96FX2 82 aa0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 BIVM-ERCC5R4GMW8 1640 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms